RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 QARSP47897 775 aaKnown RBP10.46□□□□□ -0.73
CHD4-212ENST00000545083 PTENP60484 403 aa10.46□□□□□ -0.73
CHD4-212ENST00000545083 MBTD1Q05BQ5 628 aa10.46□□□□□ -0.73
CHD4-212ENST00000545083 SIM2Q14190 667 aaPredicted RBP10.46□□□□□ -0.73
CHD4-212ENST00000545083 GRM2Q14416 872 aa10.46□□□□□ -0.73
CHD4-212ENST00000545083 EMC2Q15006 297 aa10.46□□□□□ -0.73
CHD4-212ENST00000545083 NTRK3Q16288 839 aa10.46□□□□□ -0.73
CHD4-212ENST00000545083 DNASE1L2Q92874 299 aa10.46□□□□□ -0.73
CHD4-212ENST00000545083 CXCL16Q9H2A7 254 aa10.46□□□□□ -0.73
CHD4-212ENST00000545083 LMAN1LQ9HAT1 526 aa10.46□□□□□ -0.73
CHD4-212ENST00000545083 XPNPEP1Q9NQW7 623 aa10.46□□□□□ -0.73
CHD4-212ENST00000545083 VAV3Q9UKW4 847 aa10.46□□□□□ -0.73
CHD4-212ENST00000545083 KCNH3Q9ULD8 1083 aa10.46□□□□□ -0.73
CHD4-212ENST00000545083 CHURC1-FNTBB4DL54 471 aa10.45□□□□□ -0.74
CHD4-212ENST00000545083 INO80B-WBP1J3KQ70 363 aa10.45□□□□□ -0.74
CHD4-212ENST00000545083 PTGESO14684 152 aa10.45□□□□□ -0.74
CHD4-212ENST00000545083 TM4SF5O14894 197 aa10.45□□□□□ -0.74
CHD4-212ENST00000545083 ASAP2O43150 1006 aa10.45□□□□□ -0.74
CHD4-212ENST00000545083 SLC37A4O43826 429 aa10.45□□□□□ -0.74
CHD4-212ENST00000545083 NPTXRO95502 500 aa10.45□□□□□ -0.74
CHD4-212ENST00000545083 RHOP08100 348 aa10.45□□□□□ -0.74
CHD4-212ENST00000545083 CPA1P15085 419 aa10.45□□□□□ -0.74
CHD4-212ENST00000545083 OR1D2P34982 312 aa10.45□□□□□ -0.74
CHD4-212ENST00000545083 RFC5P40937 340 aa10.45□□□□□ -0.74
CHD4-212ENST00000545083 FNTBP49356 437 aa10.45□□□□□ -0.74
CHD4-212ENST00000545083 NRLP54845 237 aa10.45□□□□□ -0.74
CHD4-212ENST00000545083 SHC2P98077 582 aa10.45□□□□□ -0.74
CHD4-212ENST00000545083 RAB33AQ14088 237 aa10.45□□□□□ -0.74
CHD4-212ENST00000545083 IFNLR1Q8IU57 520 aaPredicted RBP10.45□□□□□ -0.74
CHD4-212ENST00000545083 CCDC148Q8NFR7 591 aa10.45□□□□□ -0.74
CHD4-212ENST00000545083 TCP11Q8WWU5 503 aa10.45□□□□□ -0.74
CHD4-212ENST00000545083 ELSPBP1Q96BH3 223 aa10.45□□□□□ -0.74
CHD4-212ENST00000545083 TRIM6Q9C030 488 aaPredicted RBP10.45□□□□□ -0.74
CHD4-212ENST00000545083 GDE1Q9NZC3 331 aa10.45□□□□□ -0.74
CHD4-212ENST00000545083 PARP2Q9UGN5 583 aa10.45□□□□□ -0.74
CHD4-212ENST00000545083 PKD1L2Q7Z442 2459 aa10.45□□□□□ -0.74
CHD4-212ENST00000545083 COL4A2P08572 1712 aa10.44□□□□□ -0.74
CHD4-212ENST00000545083 NID2Q14112 1375 aa10.44□□□□□ -0.74
CHD4-212ENST00000545083 CCDC196A0A1B0GTZ2 297 aa10.44□□□□□ -0.74
CHD4-212ENST00000545083 MAN2B1O00754 1011 aa10.44□□□□□ -0.74
CHD4-212ENST00000545083 CHRNB1P11230 501 aa10.44□□□□□ -0.74
CHD4-212ENST00000545083 CCR3P51677 355 aa10.44□□□□□ -0.74
CHD4-212ENST00000545083 PPP2R5CQ13362 524 aa10.44□□□□□ -0.74
CHD4-212ENST00000545083 TUSC3Q13454 348 aa10.44□□□□□ -0.74
CHD4-212ENST00000545083 CAPSQ13938 189 aa10.44□□□□□ -0.74
CHD4-212ENST00000545083 PCBP1Q15365 356 aaKnown RBP eCLIP10.44□□□□□ -0.74
CHD4-212ENST00000545083 NAB2Q15742 525 aa10.44□□□□□ -0.74
CHD4-212ENST00000545083 UVSSAQ2YD98 709 aa10.44□□□□□ -0.74
CHD4-212ENST00000545083 WDR44Q5JSH3 913 aa10.44□□□□□ -0.74
CHD4-212ENST00000545083 FAM78AQ5JUQ0 283 aa10.44□□□□□ -0.74
CHD4-212ENST00000545083 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.44□□□□□ -0.74
CHD4-212ENST00000545083 ASAP3Q8TDY4 903 aa10.44□□□□□ -0.74
CHD4-212ENST00000545083 TCEAL4Q96EI5 215 aa10.44□□□□□ -0.74
CHD4-212ENST00000545083 LXNQ9BS40 222 aa10.44□□□□□ -0.74
CHD4-212ENST00000545083 IER2Q9BTL4 223 aa10.44□□□□□ -0.74
CHD4-212ENST00000545083 SLC26A6Q9BXS9 759 aa10.44□□□□□ -0.74
CHD4-212ENST00000545083 BRD9Q9H8M2 597 aa10.44□□□□□ -0.74
CHD4-212ENST00000545083 SH2B1Q9NRF2 756 aaPredicted RBP10.44□□□□□ -0.74
CHD4-212ENST00000545083 RXFP3Q9NSD7 469 aa10.44□□□□□ -0.74
CHD4-212ENST00000545083 C2orf42Q9NWW7 574 aa10.44□□□□□ -0.74
CHD4-212ENST00000545083 RGL1Q9NZL6 768 aa10.44□□□□□ -0.74
CHD4-212ENST00000545083 DDX25Q9UHL0 483 aaKnown RBP10.44□□□□□ -0.74
CHD4-212ENST00000545083 PPME1Q9Y570 386 aa10.44□□□□□ -0.74
CHD4-212ENST00000545083 VWA8A3KMH1 1905 aa10.44□□□□□ -0.74
CHD4-212ENST00000545083 ZMYM2Q9UBW7 1377 aa10.43□□□□□ -0.74
CHD4-212ENST00000545083 NCANO14594 1321 aa10.43□□□□□ -0.74
CHD4-212ENST00000545083 K7ESF4 209 aa10.43□□□□□ -0.74
CHD4-212ENST00000545083 M0R2N6 131 aa10.43□□□□□ -0.74
CHD4-212ENST00000545083 TULP1O00294 542 aaPredicted RBP10.43□□□□□ -0.74
CHD4-212ENST00000545083 PROS1P07225 676 aa10.43□□□□□ -0.74
CHD4-212ENST00000545083 P4HBP07237 508 aaKnown RBP10.43□□□□□ -0.74
CHD4-212ENST00000545083 YWHABP31946 246 aaKnown RBP10.43□□□□□ -0.74
CHD4-212ENST00000545083 CCR2P41597 374 aa10.43□□□□□ -0.74
CHD4-212ENST00000545083 CXCL12P48061 93 aa10.43□□□□□ -0.74
CHD4-212ENST00000545083 NLRP5P59047 1200 aa10.43□□□□□ -0.74
CHD4-212ENST00000545083 AKAP17AQ02040 695 aaKnown RBP10.43□□□□□ -0.74
CHD4-212ENST00000545083 SF3A2Q15428 464 aaKnown RBP10.43□□□□□ -0.74
CHD4-212ENST00000545083 NPY5RQ15761 445 aa10.43□□□□□ -0.74
CHD4-212ENST00000545083 CCDC6Q16204 474 aa10.43□□□□□ -0.74
CHD4-212ENST00000545083 TSGA10IPQ3SY00 556 aa10.43□□□□□ -0.74
CHD4-212ENST00000545083 XKR9Q5GH70 373 aa10.43□□□□□ -0.74
CHD4-212ENST00000545083 PRSS36Q5K4E3 855 aa10.43□□□□□ -0.74
CHD4-212ENST00000545083 RNF20Q5VTR2 975 aa10.43□□□□□ -0.74
CHD4-212ENST00000545083 HEATR6Q6AI08 1181 aaKnown RBP10.43□□□□□ -0.74
CHD4-212ENST00000545083 IL31Q6EBC2 164 aa10.43□□□□□ -0.74
CHD4-212ENST00000545083 MOXD1Q6UVY6 613 aa10.43□□□□□ -0.74
CHD4-212ENST00000545083 Q6ZUG5 572 aa10.43□□□□□ -0.74
CHD4-212ENST00000545083 MAP4K3Q8IVH8 894 aa10.43□□□□□ -0.74
CHD4-212ENST00000545083 C4orf19Q8IY42 314 aa10.43□□□□□ -0.74
CHD4-212ENST00000545083 EXOC8Q8IYI6 725 aa10.43□□□□□ -0.74
CHD4-212ENST00000545083 HACE1Q8IYU2 909 aa10.43□□□□□ -0.74
CHD4-212ENST00000545083 FAM160A2Q8N612 972 aaPredicted RBP10.43□□□□□ -0.74
CHD4-212ENST00000545083 DDX1Q92499 740 aaKnown RBP10.43□□□□□ -0.74
CHD4-212ENST00000545083 FAM3CQ92520 227 aa10.43□□□□□ -0.74
CHD4-212ENST00000545083 BRF1Q92994 677 aa10.43□□□□□ -0.74
CHD4-212ENST00000545083 MTRQ99707 1265 aa10.43□□□□□ -0.74
CHD4-212ENST00000545083 RNF26Q9BY78 433 aaPredicted RBP10.43□□□□□ -0.74
CHD4-212ENST00000545083 ZNF334Q9HCZ1 680 aaPredicted RBP10.43□□□□□ -0.74
CHD4-212ENST00000545083 KCNMB3Q9NPA1 279 aa10.43□□□□□ -0.74
CHD4-212ENST00000545083 AVENQ9NQS1 362 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms