RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 GAD1Q99259 594 aa12.78□□□□□ -0.36
SNHG1-221ENST00000544983 FAM213AQ9BRX8 229 aa12.78□□□□□ -0.36
SNHG1-221ENST00000544983 APOL6Q9BWW8 343 aa12.78□□□□□ -0.36
SNHG1-221ENST00000544983 SEMA6BQ9H3T3 888 aa12.78□□□□□ -0.36
SNHG1-221ENST00000544983 MEIS3P2A8K0S8 358 aa12.77□□□□□ -0.37
SNHG1-221ENST00000544983 CLIC2O15247 247 aa12.77□□□□□ -0.37
SNHG1-221ENST00000544983 SLC16A3O15427 465 aaKnown RBP12.77□□□□□ -0.37
SNHG1-221ENST00000544983 CAVIN2O95810 425 aa12.77□□□□□ -0.37
SNHG1-221ENST00000544983 CCDC192P0DO97 292 aa12.77□□□□□ -0.37
SNHG1-221ENST00000544983 CD44P16070 742 aaKnown RBP12.77□□□□□ -0.37
SNHG1-221ENST00000544983 IBSPP21815 317 aaPredicted RBP12.77□□□□□ -0.37
SNHG1-221ENST00000544983 PSMC2P35998 433 aaKnown RBP12.77□□□□□ -0.37
SNHG1-221ENST00000544983 ACOT2P49753 483 aa12.77□□□□□ -0.37
SNHG1-221ENST00000544983 CYP2J2P51589 502 aa12.77□□□□□ -0.37
SNHG1-221ENST00000544983 OSTNP61366 133 aa12.77□□□□□ -0.37
SNHG1-221ENST00000544983 ADAM9Q13443 819 aa12.77□□□□□ -0.37
SNHG1-221ENST00000544983 SNRNP35Q16560 246 aaKnown RBP12.77□□□□□ -0.37
SNHG1-221ENST00000544983 KLHL10Q6JEL2 608 aa12.77□□□□□ -0.37
SNHG1-221ENST00000544983 GPR153Q6NV75 609 aa12.77□□□□□ -0.37
SNHG1-221ENST00000544983 TTI2Q6NXR4 508 aa12.77□□□□□ -0.37
SNHG1-221ENST00000544983 CRELD2Q6UXH1 353 aaPredicted RBP12.77□□□□□ -0.37
SNHG1-221ENST00000544983 ZC3H3Q8IXZ2 948 aaKnown RBP12.77□□□□□ -0.37
SNHG1-221ENST00000544983 NELFBQ8WX92 580 aa12.77□□□□□ -0.37
SNHG1-221ENST00000544983 SAAL1Q96ER3 474 aa12.77□□□□□ -0.37
SNHG1-221ENST00000544983 CEP63Q96MT8 703 aa12.77□□□□□ -0.37
SNHG1-221ENST00000544983 UROC1Q96N76 676 aa12.77□□□□□ -0.37
SNHG1-221ENST00000544983 FAM193BQ96PV7 902 aaPredicted RBP12.77□□□□□ -0.37
SNHG1-221ENST00000544983 PLVAPQ9BX97 442 aa12.77□□□□□ -0.37
SNHG1-221ENST00000544983 PBX4Q9BYU1 374 aa12.77□□□□□ -0.37
SNHG1-221ENST00000544983 NAT10Q9H0A0 1025 aaKnown RBP12.77□□□□□ -0.37
SNHG1-221ENST00000544983 IKZF4Q9H2S9 585 aa12.77□□□□□ -0.37
SNHG1-221ENST00000544983 PCIF1Q9H4Z3 704 aa12.77□□□□□ -0.37
SNHG1-221ENST00000544983 SLC28A3Q9HAS3 691 aa12.77□□□□□ -0.37
SNHG1-221ENST00000544983 TBC1D13Q9NVG8 400 aa12.77□□□□□ -0.37
SNHG1-221ENST00000544983 RBAKQ9NYW8 714 aaPredicted RBP12.77□□□□□ -0.37
SNHG1-221ENST00000544983 STK39Q9UEW8 545 aa12.77□□□□□ -0.37
SNHG1-221ENST00000544983 C2CD2Q9Y426 696 aa12.77□□□□□ -0.37
SNHG1-221ENST00000544983 PTPRSQ13332 1948 aa12.77□□□□□ -0.37
SNHG1-221ENST00000544983 FNDC1Q4ZHG4 1894 aaPredicted RBP12.76□□□□□ -0.37
SNHG1-221ENST00000544983 SMIM28A0A1B0GU29 152 aa12.76□□□□□ -0.37
SNHG1-221ENST00000544983 GRXCR1A8MXD5 290 aa12.76□□□□□ -0.37
SNHG1-221ENST00000544983 GNA14O95837 355 aa12.76□□□□□ -0.37
SNHG1-221ENST00000544983 RB1P06400 928 aa12.76□□□□□ -0.37
SNHG1-221ENST00000544983 CXCL8P10145 99 aa12.76□□□□□ -0.37
SNHG1-221ENST00000544983 LAG3P18627 525 aa12.76□□□□□ -0.37
SNHG1-221ENST00000544983 CYP3A5P20815 502 aa12.76□□□□□ -0.37
SNHG1-221ENST00000544983 PAX3P23760 479 aa12.76□□□□□ -0.37
SNHG1-221ENST00000544983 DNAJB2P25686 324 aa12.76□□□□□ -0.37
SNHG1-221ENST00000544983 PPM1AP35813 382 aa12.76□□□□□ -0.37
SNHG1-221ENST00000544983 ALDH7A1P49419 539 aaKnown RBP12.76□□□□□ -0.37
SNHG1-221ENST00000544983 RABGGTBP53611 331 aa12.76□□□□□ -0.37
SNHG1-221ENST00000544983 AP3M2P53677 418 aa12.76□□□□□ -0.37
SNHG1-221ENST00000544983 DSC1Q08554 894 aa12.76□□□□□ -0.37
SNHG1-221ENST00000544983 DPCR1Q3MIW9 517 aa12.76□□□□□ -0.37
SNHG1-221ENST00000544983 ANKRD40Q6AI12 368 aa12.76□□□□□ -0.37
SNHG1-221ENST00000544983 FAM109BQ6ICB4 259 aaPredicted RBP12.76□□□□□ -0.37
SNHG1-221ENST00000544983 INTS8Q75QN2 995 aaKnown RBP12.76□□□□□ -0.37
SNHG1-221ENST00000544983 TMCO2Q7Z6W1 182 aaPredicted RBP12.76□□□□□ -0.37
SNHG1-221ENST00000544983 TMEM192Q8IY95 271 aa12.76□□□□□ -0.37
SNHG1-221ENST00000544983 GSTCDQ8NEC7 633 aa12.76□□□□□ -0.37
SNHG1-221ENST00000544983 CACTINQ8WUQ7 758 aaKnown RBP12.76□□□□□ -0.37
SNHG1-221ENST00000544983 TIFAQ96CG3 184 aa12.76□□□□□ -0.37
SNHG1-221ENST00000544983 DDX27Q96GQ7 796 aaKnown RBP12.76□□□□□ -0.37
SNHG1-221ENST00000544983 MFSD14AQ96MC6 490 aa12.76□□□□□ -0.37
SNHG1-221ENST00000544983 ZFP42Q96MM3 310 aa12.76□□□□□ -0.37
SNHG1-221ENST00000544983 PPP1R10Q96QC0 940 aaKnown RBP12.76□□□□□ -0.37
SNHG1-221ENST00000544983 TMEM175Q9BSA9 504 aa12.76□□□□□ -0.37
SNHG1-221ENST00000544983 KLK14Q9P0G3 267 aa12.76□□□□□ -0.37
SNHG1-221ENST00000544983 INPP5FQ9Y2H2 1132 aa12.76□□□□□ -0.37
SNHG1-221ENST00000544983 PCDHB12Q9Y5F1 795 aa12.76□□□□□ -0.37
SNHG1-221ENST00000544983 LAMA2P24043 3122 aaKnown RBP12.75□□□□□ -0.37
SNHG1-221ENST00000544983 LINC01553A4QN01 128 aa12.75□□□□□ -0.37
SNHG1-221ENST00000544983 LACTBL1A8MY62 500 aa12.75□□□□□ -0.37
SNHG1-221ENST00000544983 PTGESO14684 152 aa12.75□□□□□ -0.37
SNHG1-221ENST00000544983 ALDH2P05091 517 aa12.75□□□□□ -0.37
SNHG1-221ENST00000544983 CA3P07451 260 aa12.75□□□□□ -0.37
SNHG1-221ENST00000544983 EPB41P11171 864 aaKnown RBP12.75□□□□□ -0.37
SNHG1-221ENST00000544983 PRKCSHP14314 528 aaPredicted RBP12.75□□□□□ -0.37
SNHG1-221ENST00000544983 RPL9P32969 192 aaKnown RBP12.75□□□□□ -0.37
SNHG1-221ENST00000544983 TNFSF9P41273 254 aa12.75□□□□□ -0.37
SNHG1-221ENST00000544983 SCNN1GP51170 649 aa12.75□□□□□ -0.37
SNHG1-221ENST00000544983 MCCD1P59942 119 aaPredicted RBP12.75□□□□□ -0.37
SNHG1-221ENST00000544983 TYRO3Q06418 890 aa12.75□□□□□ -0.37
SNHG1-221ENST00000544983 CYP24A1Q07973 514 aa12.75□□□□□ -0.37
SNHG1-221ENST00000544983 TUSC3Q13454 348 aa12.75□□□□□ -0.37
SNHG1-221ENST00000544983 TMEM132DQ14C87 1099 aa12.75□□□□□ -0.37
SNHG1-221ENST00000544983 PSMD6Q15008 389 aa12.75□□□□□ -0.37
SNHG1-221ENST00000544983 ZBTB6Q15916 424 aa12.75□□□□□ -0.37
SNHG1-221ENST00000544983 SEZ6Q53EL9 994 aa12.75□□□□□ -0.37
SNHG1-221ENST00000544983 ZBTB41Q5SVQ8 909 aa12.75□□□□□ -0.37
SNHG1-221ENST00000544983 FILIP1Q7Z7B0 1213 aa12.75□□□□□ -0.37
SNHG1-221ENST00000544983 CBWD2Q8IUF1 395 aa12.75□□□□□ -0.37
SNHG1-221ENST00000544983 CSGALNACT2Q8N6G5 542 aa12.75□□□□□ -0.37
SNHG1-221ENST00000544983 BEST2Q8NFU1 509 aa12.75□□□□□ -0.37
SNHG1-221ENST00000544983 TMC2Q8TDI7 906 aa12.75□□□□□ -0.37
SNHG1-221ENST00000544983 NOC3LQ8WTT2 800 aaKnown RBP12.75□□□□□ -0.37
SNHG1-221ENST00000544983 TGS1Q96RS0 853 aaKnown RBP12.75□□□□□ -0.37
SNHG1-221ENST00000544983 FNBP1Q96RU3 617 aa12.75□□□□□ -0.37
SNHG1-221ENST00000544983 METTL14Q9HCE5 456 aaKnown RBP12.75□□□□□ -0.37
SNHG1-221ENST00000544983 UBQLN1Q9UMX0 589 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms