RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 KDM5AP29375 1690 aaKnown RBP16.28■□□□□ 0.2
CHD4-210ENST00000544040 DHX34Q14147 1143 aaKnown RBP16.28■□□□□ 0.2
CHD4-210ENST00000544040 CNBD2Q96M20 576 aa16.28■□□□□ 0.2
CHD4-210ENST00000544040 MRPL1Q9BYD6 325 aaKnown RBP16.28■□□□□ 0.2
CHD4-210ENST00000544040 PPP3CCP48454 512 aa16.28■□□□□ 0.2
CHD4-210ENST00000544040 MFN1Q8IWA4 741 aa16.28■□□□□ 0.2
CHD4-210ENST00000544040 CALR3Q96L12 384 aaKnown RBP16.28■□□□□ 0.2
CHD4-210ENST00000544040 CCT8L2Q96SF2 557 aa16.28■□□□□ 0.2
CHD4-210ENST00000544040 IRX2Q9BZI1 471 aaPredicted RBP16.28■□□□□ 0.2
CHD4-210ENST00000544040 GABBR1Q9UBS5 961 aa16.28■□□□□ 0.2
CHD4-210ENST00000544040 DPYSL4O14531 572 aa16.28■□□□□ 0.2
CHD4-210ENST00000544040 MTM1Q13496 603 aa16.28■□□□□ 0.2
CHD4-210ENST00000544040 ZNF235Q14590 738 aa16.28■□□□□ 0.2
CHD4-210ENST00000544040 SLC30A9Q6PML9 568 aa16.28■□□□□ 0.2
CHD4-210ENST00000544040 FAM196AQ6ZSG2 479 aa16.28■□□□□ 0.2
CHD4-210ENST00000544040 RIN2Q8WYP3 895 aaPredicted RBP16.28■□□□□ 0.2
CHD4-210ENST00000544040 OSBPL5Q9H0X9 879 aaPredicted RBP16.28■□□□□ 0.2
CHD4-210ENST00000544040 PAIP2BQ9ULR5 123 aaKnown RBP16.28■□□□□ 0.2
CHD4-210ENST00000544040 HMGXB3Q12766 1538 aa16.27■□□□□ 0.2
CHD4-210ENST00000544040 SLC9A1P19634 815 aa16.27■□□□□ 0.2
CHD4-210ENST00000544040 KLC1Q07866 573 aa16.27■□□□□ 0.2
CHD4-210ENST00000544040 PDAP1Q13442 181 aaKnown RBP16.27■□□□□ 0.2
CHD4-210ENST00000544040 FLAD1Q8NFF5 587 aa16.27■□□□□ 0.2
CHD4-210ENST00000544040 C17orf80Q9BSJ5 609 aa16.27■□□□□ 0.2
CHD4-210ENST00000544040 PPP1R37O75864 691 aa16.27■□□□□ 0.2
CHD4-210ENST00000544040 SRP72O76094 671 aaKnown RBP16.27■□□□□ 0.2
CHD4-210ENST00000544040 NNMTP40261 264 aa16.27■□□□□ 0.2
CHD4-210ENST00000544040 SULT1E1P49888 294 aa16.27■□□□□ 0.2
CHD4-210ENST00000544040 CCDC81Q6ZN84 652 aa16.27■□□□□ 0.2
CHD4-210ENST00000544040 FBXO2Q9UK22 296 aaPredicted RBP16.27■□□□□ 0.2
CHD4-210ENST00000544040 TEX14Q8IWB6 1497 aa16.27■□□□□ 0.2
CHD4-210ENST00000544040 PSMC5P62195 406 aa16.27■□□□□ 0.19
CHD4-210ENST00000544040 STAT4Q14765 748 aa16.27■□□□□ 0.19
CHD4-210ENST00000544040 CPA5Q8WXQ8 436 aa16.27■□□□□ 0.19
CHD4-210ENST00000544040 TRIP10Q15642 601 aa16.27■□□□□ 0.19
CHD4-210ENST00000544040 LAYNQ6UX15 382 aa16.27■□□□□ 0.19
CHD4-210ENST00000544040 ZNF579Q8NAF0 562 aaKnown RBP16.27■□□□□ 0.19
CHD4-210ENST00000544040 DCAF4Q8WV16 495 aa16.27■□□□□ 0.19
CHD4-210ENST00000544040 HPS3Q969F9 1004 aa16.27■□□□□ 0.19
CHD4-210ENST00000544040 ERP27Q96DN0 273 aa16.27■□□□□ 0.19
CHD4-210ENST00000544040 AGPAT1Q99943 283 aa16.27■□□□□ 0.19
CHD4-210ENST00000544040 STX3Q13277 289 aa16.27■□□□□ 0.19
CHD4-210ENST00000544040 SIRT2Q8IXJ6 389 aa16.27■□□□□ 0.19
CHD4-210ENST00000544040 MCPH1Q8NEM0 835 aa16.27■□□□□ 0.19
CHD4-210ENST00000544040 RFFLQ8WZ73 363 aa16.27■□□□□ 0.19
CHD4-210ENST00000544040 SEC16BQ96JE7 1060 aa16.27■□□□□ 0.19
CHD4-210ENST00000544040 TMEM47Q9BQJ4 181 aa16.27■□□□□ 0.19
CHD4-210ENST00000544040 ZNF556Q9HAH1 456 aa16.27■□□□□ 0.19
CHD4-210ENST00000544040 SLAIN2Q9P270 581 aa16.27■□□□□ 0.19
CHD4-210ENST00000544040 TRIM10Q9UDY6 481 aa16.27■□□□□ 0.19
CHD4-210ENST00000544040 NFIBO00712 420 aa16.26■□□□□ 0.19
CHD4-210ENST00000544040 CPA2P48052 419 aa16.26■□□□□ 0.19
CHD4-210ENST00000544040 ACTR2P61160 394 aa16.26■□□□□ 0.19
CHD4-210ENST00000544040 PWP1Q13610 501 aa16.26■□□□□ 0.19
CHD4-210ENST00000544040 IYDQ6PHW0 289 aa16.26■□□□□ 0.19
CHD4-210ENST00000544040 NLGN1Q8N2Q7 840 aa16.26■□□□□ 0.19
CHD4-210ENST00000544040 CCT7Q99832 543 aa16.26■□□□□ 0.19
CHD4-210ENST00000544040 MXD3Q9BW11 206 aa16.26■□□□□ 0.19
CHD4-210ENST00000544040 GPBP1L1Q9HC44 474 aaPredicted RBP16.26■□□□□ 0.19
CHD4-210ENST00000544040 PLXNC1O60486 1568 aa16.26■□□□□ 0.19
CHD4-210ENST00000544040 SERPINB4P48594 390 aa16.26■□□□□ 0.19
CHD4-210ENST00000544040 ANKS3Q6ZW76 656 aa16.26■□□□□ 0.19
CHD4-210ENST00000544040 KLF6Q99612 283 aaPredicted RBP16.26■□□□□ 0.19
CHD4-210ENST00000544040 XPO7Q9UIA9 1087 aaKnown RBP16.26■□□□□ 0.19
CHD4-210ENST00000544040 FAM32AQ9Y421 112 aaKnown RBP16.26■□□□□ 0.19
CHD4-210ENST00000544040 PITPNM2Q9BZ72 1349 aa16.26■□□□□ 0.19
CHD4-210ENST00000544040 CDC27P30260 824 aa16.26■□□□□ 0.19
CHD4-210ENST00000544040 STRBPQ96SI9 672 aaKnown RBP16.26■□□□□ 0.19
CHD4-210ENST00000544040 OLFML3Q9NRN5 406 aa16.26■□□□□ 0.19
CHD4-210ENST00000544040 RBAKQ9NYW8 714 aaPredicted RBP16.26■□□□□ 0.19
CHD4-210ENST00000544040 USP15Q9Y4E8 981 aaPredicted RBP16.26■□□□□ 0.19
CHD4-210ENST00000544040 GSNP06396 782 aa16.26■□□□□ 0.19
CHD4-210ENST00000544040 APRTP07741 180 aa16.26■□□□□ 0.19
CHD4-210ENST00000544040 C16orf96A6NNT2 1141 aa16.26■□□□□ 0.19
CHD4-210ENST00000544040 IL6STP40189 918 aaPredicted RBP16.26■□□□□ 0.19
CHD4-210ENST00000544040 ADCK2Q7Z695 626 aa16.26■□□□□ 0.19
CHD4-210ENST00000544040 DPF2Q92785 391 aa16.26■□□□□ 0.19
CHD4-210ENST00000544040 TASP1Q9H6P5 420 aa16.26■□□□□ 0.19
CHD4-210ENST00000544040 SELENONQ9NZV5 590 aa16.26■□□□□ 0.19
CHD4-210ENST00000544040 TARSL2A2RTX5 802 aaKnown RBP16.25■□□□□ 0.19
CHD4-210ENST00000544040 GGPS1O95749 300 aa16.25■□□□□ 0.19
CHD4-210ENST00000544040 CENPAP49450 140 aa16.25■□□□□ 0.19
CHD4-210ENST00000544040 SLC44A5Q8NCS7 719 aa16.25■□□□□ 0.19
CHD4-210ENST00000544040 ZNF608Q9ULD9 1512 aaPredicted RBP16.25■□□□□ 0.19
CHD4-210ENST00000544040 MAST1Q9Y2H9 1570 aa16.25■□□□□ 0.19
CHD4-210ENST00000544040 ZNF197O14709 1029 aa16.25■□□□□ 0.19
CHD4-210ENST00000544040 ATP6V1B1P15313 513 aa16.25■□□□□ 0.19
CHD4-210ENST00000544040 SCP2P22307 547 aa16.25■□□□□ 0.19
CHD4-210ENST00000544040 FLCNQ8NFG4 579 aa16.25■□□□□ 0.19
CHD4-210ENST00000544040 SLC35G2Q8TBE7 412 aa16.25■□□□□ 0.19
CHD4-210ENST00000544040 VPS50Q96JG6 964 aa16.25■□□□□ 0.19
CHD4-210ENST00000544040 AGBL1Q96MI9 1066 aa16.25■□□□□ 0.19
CHD4-210ENST00000544040 RANBP17Q9H2T7 1088 aaKnown RBP16.25■□□□□ 0.19
CHD4-210ENST00000544040 SRP68Q9UHB9 627 aaKnown RBP16.25■□□□□ 0.19
CHD4-210ENST00000544040 ABCE1P61221 599 aaKnown RBP16.25■□□□□ 0.19
CHD4-210ENST00000544040 DNAJC9Q8WXX5 260 aa16.25■□□□□ 0.19
CHD4-210ENST00000544040 C9orf72Q96LT7 481 aa16.25■□□□□ 0.19
CHD4-210ENST00000544040 LXNQ9BS40 222 aa16.25■□□□□ 0.19
CHD4-210ENST00000544040 RNPEPQ9H4A4 650 aa16.25■□□□□ 0.19
CHD4-210ENST00000544040 EIF3HO15372 352 aaKnown RBP eCLIP16.25■□□□□ 0.198e-7■■■□□ 17.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms