RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 LPXNO60711 386 aa16.45■□□□□ 0.22
CD9-210ENST00000543916 RB1P06400 928 aa16.45■□□□□ 0.22
CD9-210ENST00000543916 SLC11A1P49279 550 aa16.45■□□□□ 0.22
CD9-210ENST00000543916 GPM6BQ13491 265 aa16.45■□□□□ 0.22
CD9-210ENST00000543916 ADGRE1Q14246 886 aa16.45■□□□□ 0.22
CD9-210ENST00000543916 CAMK4Q16566 473 aa16.45■□□□□ 0.22
CD9-210ENST00000543916 KYAT1Q16773 422 aa16.45■□□□□ 0.22
CD9-210ENST00000543916 KNOP1Q1ED39 458 aaKnown RBP16.45■□□□□ 0.22
CD9-210ENST00000543916 ARMCX5Q6P1M9 558 aa16.45■□□□□ 0.22
CD9-210ENST00000543916 COLGALT2Q8IYK4 626 aa16.45■□□□□ 0.22
CD9-210ENST00000543916 KLHL23Q8NBE8 558 aa16.45■□□□□ 0.22
CD9-210ENST00000543916 MYLIPQ8WY64 445 aa16.45■□□□□ 0.22
CD9-210ENST00000543916 P2RX5Q93086 422 aa16.45■□□□□ 0.22
CD9-210ENST00000543916 SAAL1Q96ER3 474 aa16.45■□□□□ 0.22
CD9-210ENST00000543916 ZMAT2Q96NC0 199 aaKnown RBP16.45■□□□□ 0.22
CD9-210ENST00000543916 PPP1R10Q96QC0 940 aaKnown RBP16.45■□□□□ 0.22
CD9-210ENST00000543916 CDX2Q99626 313 aaPredicted RBP16.45■□□□□ 0.22
CD9-210ENST00000543916 PLVAPQ9BX97 442 aa16.45■□□□□ 0.22
CD9-210ENST00000543916 KCTD10Q9H3F6 313 aa16.45■□□□□ 0.22
CD9-210ENST00000543916 AAASQ9NRG9 546 aa16.45■□□□□ 0.22
CD9-210ENST00000543916 AGPAT3Q9NRZ7 376 aa16.45■□□□□ 0.22
CD9-210ENST00000543916 CNTN3Q9P232 1028 aa16.45■□□□□ 0.22
CD9-210ENST00000543916 CACNG4Q9UBN1 327 aa16.45■□□□□ 0.22
CD9-210ENST00000543916 MAN1B1Q9UKM7 699 aa16.45■□□□□ 0.22
CD9-210ENST00000543916 MAPK8IP1Q9UQF2 711 aa16.45■□□□□ 0.22
CD9-210ENST00000543916 PCDHB12Q9Y5F1 795 aa16.45■□□□□ 0.22
CD9-210ENST00000543916 SMIM28A0A1B0GU29 152 aa16.44■□□□□ 0.22
CD9-210ENST00000543916 TTC26A0AVF1 554 aa16.44■□□□□ 0.22
CD9-210ENST00000543916 GOLGA8IPA6NC78 632 aa16.44■□□□□ 0.22
CD9-210ENST00000543916 GOLGA8JA6NMD2 632 aa16.44■□□□□ 0.22
CD9-210ENST00000543916 CLIC2O15247 247 aa16.44■□□□□ 0.22
CD9-210ENST00000543916 GRM6O15303 877 aa16.44■□□□□ 0.22
CD9-210ENST00000543916 ITGB1P05556 798 aa16.44■□□□□ 0.22
CD9-210ENST00000543916 THP07101 528 aa16.44■□□□□ 0.22
CD9-210ENST00000543916 GALTP07902 379 aa16.44■□□□□ 0.22
CD9-210ENST00000543916 ZNF658Q5TYW1 1059 aaPredicted RBP16.44■□□□□ 0.22
CD9-210ENST00000543916 ISM2Q6H9L7 571 aa16.44■□□□□ 0.22
CD9-210ENST00000543916 TMEM173Q86WV6 379 aaPredicted RBP16.44■□□□□ 0.22
CD9-210ENST00000543916 SLC39A11Q8N1S5 342 aa16.44■□□□□ 0.22
CD9-210ENST00000543916 BCL7CQ8WUZ0 217 aaPredicted RBP16.44■□□□□ 0.22
CD9-210ENST00000543916 FAM193BQ96PV7 902 aaPredicted RBP16.44■□□□□ 0.22
CD9-210ENST00000543916 FAM213AQ9BRX8 229 aa16.44■□□□□ 0.22
CD9-210ENST00000543916 C11orf84Q9BUA3 381 aaPredicted RBP16.44■□□□□ 0.22
CD9-210ENST00000543916 CLSTN2Q9H4D0 955 aa16.44■□□□□ 0.22
CD9-210ENST00000543916 ALG13Q9NP73 1137 aaKnown RBP16.44■□□□□ 0.22
CD9-210ENST00000543916 LACTBL1A8MY62 500 aa16.43■□□□□ 0.22
CD9-210ENST00000543916 NRP1O14786 923 aa16.43■□□□□ 0.22
CD9-210ENST00000543916 FGF18O76093 207 aa16.43■□□□□ 0.22
CD9-210ENST00000543916 ADRB2P07550 413 aa16.43■□□□□ 0.22
CD9-210ENST00000543916 KCNE1P15382 129 aa16.43■□□□□ 0.22
CD9-210ENST00000543916 DNAJB1P25685 340 aa16.43■□□□□ 0.22
CD9-210ENST00000543916 ALDH7A1P49419 539 aaKnown RBP16.43■□□□□ 0.22
CD9-210ENST00000543916 SOX4Q06945 474 aaPredicted RBP16.43■□□□□ 0.22
CD9-210ENST00000543916 SPAG1Q07617 926 aa16.43■□□□□ 0.22
CD9-210ENST00000543916 TUSC3Q13454 348 aa16.43■□□□□ 0.22
CD9-210ENST00000543916 HS2ST1Q7LGA3 356 aa16.43■□□□□ 0.22
CD9-210ENST00000543916 GUF1Q8N442 669 aaKnown RBP16.43■□□□□ 0.22
CD9-210ENST00000543916 RABGGTAQ92696 567 aa16.43■□□□□ 0.22
CD9-210ENST00000543916 PAAF1Q9BRP4 392 aa16.43■□□□□ 0.22
CD9-210ENST00000543916 TMEM175Q9BSA9 504 aa16.43■□□□□ 0.22
CD9-210ENST00000543916 RPF1Q9H9Y2 349 aaKnown RBP16.43■□□□□ 0.22
CD9-210ENST00000543916 PLEKHA5Q9HAU0 1116 aa16.43■□□□□ 0.22
CD9-210ENST00000543916 GOLGA2P5Q9HBQ8 144 aa16.43■□□□□ 0.22
CD9-210ENST00000543916 SPG21Q9NZD8 308 aa16.43■□□□□ 0.22
CD9-210ENST00000543916 HSPBP1Q9NZL4 362 aa16.43■□□□□ 0.22
CD9-210ENST00000543916 CASTOR2A6NHX0 329 aa16.42■□□□□ 0.22
CD9-210ENST00000543916 F8W810 466 aa16.42■□□□□ 0.22
CD9-210ENST00000543916 BIN1O00499 593 aa16.42■□□□□ 0.22
CD9-210ENST00000543916 EXTL3O43909 919 aa16.42■□□□□ 0.22
CD9-210ENST00000543916 BMP6P22004 513 aa16.42■□□□□ 0.22
CD9-210ENST00000543916 MCM4P33991 863 aa16.42■□□□□ 0.22
CD9-210ENST00000543916 PPM1AP35813 382 aa16.42■□□□□ 0.22
CD9-210ENST00000543916 PRCPP42785 496 aa16.42■□□□□ 0.22
CD9-210ENST00000543916 OR1G1P47890 313 aa16.42■□□□□ 0.22
CD9-210ENST00000543916 CYP2J2P51589 502 aa16.42■□□□□ 0.22
CD9-210ENST00000543916 WNT7BP56706 349 aa16.42■□□□□ 0.22
CD9-210ENST00000543916 SNRPFP62306 86 aaKnown RBP16.42■□□□□ 0.22
CD9-210ENST00000543916 PPP2R3AQ06190 1150 aa16.42■□□□□ 0.22
CD9-210ENST00000543916 GPD1LQ8N335 351 aa16.42■□□□□ 0.22
CD9-210ENST00000543916 TMEM130Q8N3G9 435 aa16.42■□□□□ 0.22
CD9-210ENST00000543916 SPPL3Q8TCT6 385 aa16.42■□□□□ 0.22
CD9-210ENST00000543916 NOC3LQ8WTT2 800 aaKnown RBP16.42■□□□□ 0.22
CD9-210ENST00000543916 C18orf25Q96B23 403 aaPredicted RBP16.42■□□□□ 0.22
CD9-210ENST00000543916 FAM212AQ96EL1 285 aa16.42■□□□□ 0.22
CD9-210ENST00000543916 MARCH5Q9NX47 278 aa16.42■□□□□ 0.22
CD9-210ENST00000543916 KIAA1468Q9P260 1216 aa16.42■□□□□ 0.22
CD9-210ENST00000543916 CGNQ9P2M7 1197 aaKnown RBP16.42■□□□□ 0.22
CD9-210ENST00000543916 PRG3Q9Y2Y8 225 aaPredicted RBP16.42■□□□□ 0.22
CD9-210ENST00000543916 PDXKO00764 312 aa16.41■□□□□ 0.22
CD9-210ENST00000543916 KIAA0391O15091 583 aaKnown RBP16.41■□□□□ 0.22
CD9-210ENST00000543916 KIF20AO95235 890 aa16.41■□□□□ 0.22
CD9-210ENST00000543916 LDHAP00338 332 aaKnown RBP16.41■□□□□ 0.22
CD9-210ENST00000543916 PLCB3Q01970 1234 aa16.41■□□□□ 0.22
CD9-210ENST00000543916 CAMK1Q14012 370 aa16.41■□□□□ 0.22
CD9-210ENST00000543916 MORC3Q14149 939 aa16.41■□□□□ 0.22
CD9-210ENST00000543916 COBLL1Q53SF7 1204 aa16.41■□□□□ 0.22
CD9-210ENST00000543916 JADE1Q6IE81 842 aa16.41■□□□□ 0.22
CD9-210ENST00000543916 BRSK2Q8IWQ3 736 aa16.41■□□□□ 0.22
CD9-210ENST00000543916 C12orf56Q8IXR9 622 aa16.41■□□□□ 0.22
CD9-210ENST00000543916 IGSF21Q96ID5 467 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms