RNA–Protein interactions for RNA: ENST00000543754.1

PUS1-209, Transcript of pseudouridylate synthase 1, humanhuman

TSL 2

Gene PUS1, Length 1,378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUS1-209ENST00000543754 ITFG1Q8TB96 612 aa12.15□□□□□ -0.46
PUS1-209ENST00000543754 LNX1Q8TBB1 728 aaPredicted RBP12.15□□□□□ -0.46
PUS1-209ENST00000543754 HDAC7Q8WUI4 952 aa12.15□□□□□ -0.46
PUS1-209ENST00000543754 CCDC51Q96ER9 411 aa12.15□□□□□ -0.46
PUS1-209ENST00000543754 COLEC11Q9BWP8 271 aa12.15□□□□□ -0.46
PUS1-209ENST00000543754 POLD4Q9HCU8 107 aa12.15□□□□□ -0.46
PUS1-209ENST00000543754 ANKEF1Q9NU02 776 aa12.15□□□□□ -0.46
PUS1-209ENST00000543754 STK39Q9UEW8 545 aa12.15□□□□□ -0.46
PUS1-209ENST00000543754 FBXW11Q9UKB1 542 aa12.15□□□□□ -0.46
PUS1-209ENST00000543754 MTF2Q9Y483 593 aaPredicted RBP12.15□□□□□ -0.46
PUS1-209ENST00000543754 PATJQ8NI35 1801 aa12.14□□□□□ -0.47
PUS1-209ENST00000543754 MED19A0JLT2 244 aaPredicted RBP12.14□□□□□ -0.47
PUS1-209ENST00000543754 CASTOR2A6NHX0 329 aa12.14□□□□□ -0.47
PUS1-209ENST00000543754 SHISA7A6NL88 538 aa12.14□□□□□ -0.47
PUS1-209ENST00000543754 STK25O00506 426 aa12.14□□□□□ -0.47
PUS1-209ENST00000543754 USO1O60763 962 aaKnown RBP12.14□□□□□ -0.47
PUS1-209ENST00000543754 SP9P0CG40 484 aa12.14□□□□□ -0.47
PUS1-209ENST00000543754 PDCP20941 246 aa12.14□□□□□ -0.47
PUS1-209ENST00000543754 MUTP22033 750 aa12.14□□□□□ -0.47
PUS1-209ENST00000543754 GRIK3Q13003 919 aa12.14□□□□□ -0.47
PUS1-209ENST00000543754 MXD4Q14582 209 aaPredicted RBP12.14□□□□□ -0.47
PUS1-209ENST00000543754 USP41Q3LFD5 358 aa12.14□□□□□ -0.47
PUS1-209ENST00000543754 PHLDB3Q6NSJ2 640 aa12.14□□□□□ -0.47
PUS1-209ENST00000543754 SLC27A1Q6PCB7 646 aa12.14□□□□□ -0.47
PUS1-209ENST00000543754 CYP26C1Q6V0L0 522 aa12.14□□□□□ -0.47
PUS1-209ENST00000543754 NFKBIZQ9BYH8 718 aa12.14□□□□□ -0.47
PUS1-209ENST00000543754 RAB34Q9BZG1 259 aa12.14□□□□□ -0.47
PUS1-209ENST00000543754 PLEKHA4Q9H4M7 779 aa12.14□□□□□ -0.47
PUS1-209ENST00000543754 PDZD7Q9H5P4 517 aa12.14□□□□□ -0.47
PUS1-209ENST00000543754 TUFT1Q9NNX1 390 aa12.14□□□□□ -0.47
PUS1-209ENST00000543754 ARHGEF3Q9NR81 526 aa12.14□□□□□ -0.47
PUS1-209ENST00000543754 SLC2A4RGQ9NR83 387 aa12.14□□□□□ -0.47
PUS1-209ENST00000543754 HCFC1R1Q9NWW0 138 aa12.14□□□□□ -0.47
PUS1-209ENST00000543754 ZDHHC7Q9NXF8 308 aa12.14□□□□□ -0.47
PUS1-209ENST00000543754 PARP2Q9UGN5 583 aa12.14□□□□□ -0.47
PUS1-209ENST00000543754 SSX2IPQ9Y2D8 614 aa12.14□□□□□ -0.47
PUS1-209ENST00000543754 CEP250Q9BV73 2442 aa12.13□□□□□ -0.47
PUS1-209ENST00000543754 MED24O75448 989 aa12.13□□□□□ -0.47
PUS1-209ENST00000543754 DGAT1O75907 488 aa12.13□□□□□ -0.47
PUS1-209ENST00000543754 PRPHP41219 470 aa12.13□□□□□ -0.47
PUS1-209ENST00000543754 FXR2P51116 673 aaKnown RBP eCLIP12.13□□□□□ -0.47
PUS1-209ENST00000543754 PDIA5Q14554 519 aa12.13□□□□□ -0.47
PUS1-209ENST00000543754 HSP90AA2PQ14568 343 aaPredicted RBP12.13□□□□□ -0.47
PUS1-209ENST00000543754 ZNF174Q15697 407 aa12.13□□□□□ -0.47
PUS1-209ENST00000543754 LARP1BQ659C4 914 aaKnown RBP12.13□□□□□ -0.47
PUS1-209ENST00000543754 HAUS3Q68CZ6 603 aa12.13□□□□□ -0.47
PUS1-209ENST00000543754 PPP4R3CPQ6ZMV5 832 aa12.13□□□□□ -0.47
PUS1-209ENST00000543754 INTS4Q96HW7 963 aaKnown RBP12.13□□□□□ -0.47
PUS1-209ENST00000543754 CCDC43Q96MW1 224 aaKnown RBP12.13□□□□□ -0.47
PUS1-209ENST00000543754 POLR3CQ9BUI4 534 aaPredicted RBP12.13□□□□□ -0.47
PUS1-209ENST00000543754 FZD8Q9H461 694 aa12.13□□□□□ -0.47
PUS1-209ENST00000543754 PIDD1Q9HB75 910 aa12.13□□□□□ -0.47
PUS1-209ENST00000543754 SNTG2Q9NY99 539 aa12.13□□□□□ -0.47
PUS1-209ENST00000543754 MIA3Q5JRA6 1907 aa12.12□□□□□ -0.47
PUS1-209ENST00000543754 CCL16O15467 120 aa12.12□□□□□ -0.47
PUS1-209ENST00000543754 TADA2AO75478 443 aa12.12□□□□□ -0.47
PUS1-209ENST00000543754 C1RP00736 705 aa12.12□□□□□ -0.47
PUS1-209ENST00000543754 LMNAP02545 664 aaKnown RBP12.12□□□□□ -0.47
PUS1-209ENST00000543754 FSHRP23945 695 aa12.12□□□□□ -0.47
PUS1-209ENST00000543754 RPA1P27694 616 aa12.12□□□□□ -0.47
PUS1-209ENST00000543754 STARD6P59095 220 aa12.12□□□□□ -0.47
PUS1-209ENST00000543754 TUSC3Q13454 348 aa12.12□□□□□ -0.47
PUS1-209ENST00000543754 TFDP1Q14186 410 aa12.12□□□□□ -0.47
PUS1-209ENST00000543754 PCBP1Q15365 356 aaKnown RBP eCLIP12.12□□□□□ -0.47
PUS1-209ENST00000543754 ECM1Q16610 540 aa12.12□□□□□ -0.47
PUS1-209ENST00000543754 FAM171A1Q5VUB5 890 aa12.12□□□□□ -0.47
PUS1-209ENST00000543754 CDCA2Q69YH5 1023 aaPredicted RBP12.12□□□□□ -0.47
PUS1-209ENST00000543754 MCTP1Q6DN14 999 aa12.12□□□□□ -0.47
PUS1-209ENST00000543754 DCLRE1AQ6PJP8 1040 aa12.12□□□□□ -0.47
PUS1-209ENST00000543754 GPR65Q8IYL9 337 aa12.12□□□□□ -0.47
PUS1-209ENST00000543754 KIAA2013Q8IYS2 634 aa12.12□□□□□ -0.47
PUS1-209ENST00000543754 PJA1Q8NG27 643 aa12.12□□□□□ -0.47
PUS1-209ENST00000543754 PIK3R5Q8WYR1 880 aa12.12□□□□□ -0.47
PUS1-209ENST00000543754 STAMQ92783 540 aa12.12□□□□□ -0.47
PUS1-209ENST00000543754 NACC1Q96RE7 527 aa12.12□□□□□ -0.47
PUS1-209ENST00000543754 PLA2G2FQ9BZM2 168 aa12.12□□□□□ -0.47
PUS1-209ENST00000543754 CCDC113Q9H0I3 377 aa12.12□□□□□ -0.47
PUS1-209ENST00000543754 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.12□□□□□ -0.47
PUS1-209ENST00000543754 SIT1Q9Y3P8 196 aa12.12□□□□□ -0.47
PUS1-209ENST00000543754 LRRIQ4A6NIV6 560 aa12.11□□□□□ -0.47
PUS1-209ENST00000543754 RECQL4O94761 1208 aa12.11□□□□□ -0.47
PUS1-209ENST00000543754 C8AP07357 584 aa12.11□□□□□ -0.47
PUS1-209ENST00000543754 CD72P21854 359 aa12.11□□□□□ -0.47
PUS1-209ENST00000543754 TOB1P50616 345 aaPredicted RBP12.11□□□□□ -0.47
PUS1-209ENST00000543754 FOXK2Q01167 660 aa12.11□□□□□ -0.47
PUS1-209ENST00000543754 SNW1Q13573 536 aaKnown RBP12.11□□□□□ -0.47
PUS1-209ENST00000543754 PSMD5Q16401 504 aa12.11□□□□□ -0.47
PUS1-209ENST00000543754 BRAPQ7Z569 592 aa12.11□□□□□ -0.47
PUS1-209ENST00000543754 CATSPER3Q86XQ3 398 aa12.11□□□□□ -0.47
PUS1-209ENST00000543754 CEP57Q86XR8 500 aa12.11□□□□□ -0.47
PUS1-209ENST00000543754 C1orf210Q8IVY1 113 aa12.11□□□□□ -0.47
PUS1-209ENST00000543754 TMEM130Q8N3G9 435 aa12.11□□□□□ -0.47
PUS1-209ENST00000543754 C4orf32Q8N8J7 132 aa12.11□□□□□ -0.47
PUS1-209ENST00000543754 SUMF1Q8NBK3 374 aa12.11□□□□□ -0.47
PUS1-209ENST00000543754 C3orf58Q8NDZ4 430 aa12.11□□□□□ -0.47
PUS1-209ENST00000543754 FGF13Q92913 245 aa12.11□□□□□ -0.47
PUS1-209ENST00000543754 NXPE3Q969Y0 559 aa12.11□□□□□ -0.47
PUS1-209ENST00000543754 TTPALQ9BTX7 342 aa12.11□□□□□ -0.47
PUS1-209ENST00000543754 DDX23Q9BUQ8 820 aaKnown RBP12.11□□□□□ -0.47
PUS1-209ENST00000543754 KIFC3Q9BVG8 833 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms