RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 PDE12Q6L8Q7 609 aaKnown RBP12.07□□□□□ -0.48
DDB1-222ENST00000543627 ZPBP2Q6X784 338 aa12.07□□□□□ -0.48
DDB1-222ENST00000543627 GLYCTKQ8IVS8 523 aa12.07□□□□□ -0.48
DDB1-222ENST00000543627 MRPL43Q8N983 215 aaKnown RBP12.07□□□□□ -0.48
DDB1-222ENST00000543627 FSIP1Q8NA03 581 aa12.07□□□□□ -0.48
DDB1-222ENST00000543627 POMGNT1Q8WZA1 660 aa12.07□□□□□ -0.48
DDB1-222ENST00000543627 ACCSQ96QU6 501 aa12.07□□□□□ -0.48
DDB1-222ENST00000543627 CUEDC2Q9H467 287 aa12.07□□□□□ -0.48
DDB1-222ENST00000543627 BARX2Q9UMQ3 279 aaPredicted RBP12.07□□□□□ -0.48
DDB1-222ENST00000543627 EXOC7Q9UPT5 735 aa12.07□□□□□ -0.48
DDB1-222ENST00000543627 PCDHB13Q9Y5F0 798 aa12.07□□□□□ -0.48
DDB1-222ENST00000543627 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.06□□□□□ -0.48
DDB1-222ENST00000543627 SMIM28A0A1B0GU29 152 aa12.06□□□□□ -0.48
DDB1-222ENST00000543627 FSCN2O14926 492 aa12.06□□□□□ -0.48
DDB1-222ENST00000543627 URODP06132 367 aa12.06□□□□□ -0.48
DDB1-222ENST00000543627 CXCL8P10145 99 aa12.06□□□□□ -0.48
DDB1-222ENST00000543627 PROZP22891 400 aa12.06□□□□□ -0.48
DDB1-222ENST00000543627 CMA1P23946 247 aa12.06□□□□□ -0.48
DDB1-222ENST00000543627 KLRC2P26717 231 aa12.06□□□□□ -0.48
DDB1-222ENST00000543627 SYKP43405 635 aa12.06□□□□□ -0.48
DDB1-222ENST00000543627 ACOT2P49753 483 aa12.06□□□□□ -0.48
DDB1-222ENST00000543627 MCL1Q07820 350 aa12.06□□□□□ -0.48
DDB1-222ENST00000543627 KCNA1Q09470 495 aa12.06□□□□□ -0.48
DDB1-222ENST00000543627 COASYQ13057 564 aa12.06□□□□□ -0.48
DDB1-222ENST00000543627 ADAM15Q13444 863 aa12.06□□□□□ -0.48
DDB1-222ENST00000543627 CUL4BQ13620 913 aa12.06□□□□□ -0.48
DDB1-222ENST00000543627 HSP90AA2PQ14568 343 aaPredicted RBP12.06□□□□□ -0.48
DDB1-222ENST00000543627 ZBTB41Q5SVQ8 909 aa12.06□□□□□ -0.48
DDB1-222ENST00000543627 PTCRAQ6ISU1 281 aaPredicted RBP12.06□□□□□ -0.48
DDB1-222ENST00000543627 TRIM9Q9C026 710 aa12.06□□□□□ -0.48
DDB1-222ENST00000543627 HAPLN2Q9GZV7 340 aa12.06□□□□□ -0.48
DDB1-222ENST00000543627 ZBP1Q9H171 429 aa12.06□□□□□ -0.48
DDB1-222ENST00000543627 PCIF1Q9H4Z3 704 aa12.06□□□□□ -0.48
DDB1-222ENST00000543627 RPF1Q9H9Y2 349 aaKnown RBP12.06□□□□□ -0.48
DDB1-222ENST00000543627 MRPL17Q9NRX2 175 aaKnown RBP12.06□□□□□ -0.48
DDB1-222ENST00000543627 KBTBD4Q9NVX7 518 aa12.06□□□□□ -0.48
DDB1-222ENST00000543627 MARCH5Q9NX47 278 aa12.06□□□□□ -0.48
DDB1-222ENST00000543627 SEL1LQ9UBV2 794 aa12.06□□□□□ -0.48
DDB1-222ENST00000543627 A0A0C4DFX4 3053 aa12.06□□□□□ -0.48
DDB1-222ENST00000543627 TDRD15B5MCY1 1934 aaKnown RBP12.05□□□□□ -0.48
DDB1-222ENST00000543627 XIRP2A4UGR9 3374 aa12.05□□□□□ -0.48
DDB1-222ENST00000543627 C2orf71A6NGG8 1288 aa12.05□□□□□ -0.48
DDB1-222ENST00000543627 B3GAT3O94766 335 aa12.05□□□□□ -0.48
DDB1-222ENST00000543627 CLTAP09496 248 aa12.05□□□□□ -0.48
DDB1-222ENST00000543627 CTSAP10619 480 aa12.05□□□□□ -0.48
DDB1-222ENST00000543627 ABCD1P33897 745 aa12.05□□□□□ -0.48
DDB1-222ENST00000543627 CLCNKBP51801 687 aa12.05□□□□□ -0.48
DDB1-222ENST00000543627 CASP5P51878 434 aa12.05□□□□□ -0.48
DDB1-222ENST00000543627 NDUFA8P51970 172 aa12.05□□□□□ -0.48
DDB1-222ENST00000543627 PPP2R3AQ06190 1150 aa12.05□□□□□ -0.48
DDB1-222ENST00000543627 DSC1Q08554 894 aa12.05□□□□□ -0.48
DDB1-222ENST00000543627 DUSP6Q16828 381 aa12.05□□□□□ -0.48
DDB1-222ENST00000543627 SLC10A6Q3KNW5 377 aa12.05□□□□□ -0.48
DDB1-222ENST00000543627 FUT10Q6P4F1 479 aa12.05□□□□□ -0.48
DDB1-222ENST00000543627 STXBP4Q6ZWJ1 553 aa12.05□□□□□ -0.48
DDB1-222ENST00000543627 MAP4K3Q8IVH8 894 aa12.05□□□□□ -0.48
DDB1-222ENST00000543627 NELFCDQ8IXH7 590 aa12.05□□□□□ -0.48
DDB1-222ENST00000543627 EFHBQ8N7U6 833 aa12.05□□□□□ -0.48
DDB1-222ENST00000543627 C18orf25Q96B23 403 aaPredicted RBP12.05□□□□□ -0.48
DDB1-222ENST00000543627 KIF12Q96FN5 646 aa12.05□□□□□ -0.48
DDB1-222ENST00000543627 SNX27Q96L92 541 aa12.05□□□□□ -0.48
DDB1-222ENST00000543627 ZMAT2Q96NC0 199 aaKnown RBP12.05□□□□□ -0.48
DDB1-222ENST00000543627 NECAB3Q96P71 396 aaPredicted RBP12.05□□□□□ -0.48
DDB1-222ENST00000543627 FIZ1Q96SL8 496 aa12.05□□□□□ -0.48
DDB1-222ENST00000543627 PYM1Q9BRP8 204 aaKnown RBP12.05□□□□□ -0.48
DDB1-222ENST00000543627 VN1R3Q9BXE9 311 aa12.05□□□□□ -0.48
DDB1-222ENST00000543627 EMILIN2Q9BXX0 1053 aa12.05□□□□□ -0.48
DDB1-222ENST00000543627 FGFBP2Q9BYJ0 223 aa12.05□□□□□ -0.48
DDB1-222ENST00000543627 GPR62Q9BZJ7 368 aa12.05□□□□□ -0.48
DDB1-222ENST00000543627 ADAM28Q9UKQ2 775 aa12.05□□□□□ -0.48
DDB1-222ENST00000543627 AGO2Q9UKV8 859 aaKnown RBP12.05□□□□□ -0.48
DDB1-222ENST00000543627 TCF20Q9UGU0 1960 aaKnown RBP12.05□□□□□ -0.48
DDB1-222ENST00000543627 GOLGA8IPA6NC78 632 aa12.04□□□□□ -0.48
DDB1-222ENST00000543627 GOLGA8JA6NMD2 632 aa12.04□□□□□ -0.48
DDB1-222ENST00000543627 LACTBL1A8MY62 500 aa12.04□□□□□ -0.48
DDB1-222ENST00000543627 I3L4J1 428 aa12.04□□□□□ -0.48
DDB1-222ENST00000543627 ABLIM1O14639 778 aa12.04□□□□□ -0.48
DDB1-222ENST00000543627 OGTO15294 1046 aa12.04□□□□□ -0.48
DDB1-222ENST00000543627 INPPL1O15357 1258 aa12.04□□□□□ -0.48
DDB1-222ENST00000543627 CLASP2O75122 1294 aaKnown RBP12.04□□□□□ -0.48
DDB1-222ENST00000543627 TBX10O75333 385 aa12.04□□□□□ -0.48
DDB1-222ENST00000543627 KIF4AO95239 1232 aa12.04□□□□□ -0.48
DDB1-222ENST00000543627 SOD2P04179 222 aa12.04□□□□□ -0.48
DDB1-222ENST00000543627 SRGAP2BP0DMP2 458 aa12.04□□□□□ -0.48
DDB1-222ENST00000543627 IL9P15248 144 aa12.04□□□□□ -0.48
DDB1-222ENST00000543627 SCP2P22307 547 aa12.04□□□□□ -0.48
DDB1-222ENST00000543627 IGFBP6P24592 240 aaPredicted RBP12.04□□□□□ -0.48
DDB1-222ENST00000543627 LTBRP36941 435 aa12.04□□□□□ -0.48
DDB1-222ENST00000543627 GLUD2P49448 558 aa12.04□□□□□ -0.48
DDB1-222ENST00000543627 L1TD1Q5T7N2 865 aaKnown RBP12.04□□□□□ -0.48
DDB1-222ENST00000543627 FAM171A1Q5VUB5 890 aa12.04□□□□□ -0.48
DDB1-222ENST00000543627 SLFN12LQ6IEE8 588 aa12.04□□□□□ -0.48
DDB1-222ENST00000543627 SLC39A4Q6P5W5 647 aa12.04□□□□□ -0.48
DDB1-222ENST00000543627 PALB2Q86YC2 1186 aa12.04□□□□□ -0.48
DDB1-222ENST00000543627 TMEM130Q8N3G9 435 aa12.04□□□□□ -0.48
DDB1-222ENST00000543627 GLIS3Q8NEA6 775 aa12.04□□□□□ -0.48
DDB1-222ENST00000543627 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.04□□□□□ -0.48
DDB1-222ENST00000543627 ADAMTS19Q8TE59 1207 aa12.04□□□□□ -0.48
DDB1-222ENST00000543627 RIN2Q8WYP3 895 aaPredicted RBP12.04□□□□□ -0.48
DDB1-222ENST00000543627 SAAL1Q96ER3 474 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms