RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 CASTOR2A6NHX0 329 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 LACTBL1A8MY62 500 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 NT5C1B-RDH14C9J2C7 533 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 SOX1O00570 391 aaPredicted RBP6.86□□□□□ -1.31
LTBR-212ENST00000543542 ABLIM1O14639 778 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 CETN3O15182 167 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 TGFB1I1O43294 461 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 LETM1O95202 739 aaPredicted RBP6.86□□□□□ -1.31
LTBR-212ENST00000543542 NR3C1P04150 777 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 ALDH2P05091 517 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 TMEM191BP0C7N4 346 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 KRT13P13646 458 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 NR2F2P24468 414 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 CCNE1P24864 410 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 ADSSP30520 456 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 HOXD13P35453 343 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 PBX3P40426 434 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 AFF1P51825 1210 aaKnown RBP6.86□□□□□ -1.31
LTBR-212ENST00000543542 BCAR1P56945 870 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 STX17P56962 302 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 NLRP12P59046 1061 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 TAP1Q03518 808 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 KRT17Q04695 432 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 SPAG1Q07617 926 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 PAK1Q13153 545 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 ADAM9Q13443 819 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 TUSC3Q13454 348 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 TMEM132DQ14C87 1099 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 SURF1Q15526 300 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 NFKBIBQ15653 356 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 ENOX2Q16206 610 aaKnown RBP6.86□□□□□ -1.31
LTBR-212ENST00000543542 SNRNP35Q16560 246 aaKnown RBP6.86□□□□□ -1.31
LTBR-212ENST00000543542 KLHL40Q2TBA0 621 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 ZBTB41Q5SVQ8 909 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 KCNT2Q6UVM3 1135 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 ZNF280BQ86YH2 543 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 CD302Q8IX05 232 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 ADSSL1Q8N142 457 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 CRIPAKQ8N1N5 446 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 MLKLQ8NB16 471 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 COLGALT1Q8NBJ5 622 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 BEST2Q8NFU1 509 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 SP7Q8TDD2 431 aaPredicted RBP6.86□□□□□ -1.31
LTBR-212ENST00000543542 CACTINQ8WUQ7 758 aaKnown RBP6.86□□□□□ -1.31
LTBR-212ENST00000543542 NELFBQ8WX92 580 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 P2RX5Q93086 422 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 TMEM169Q96HH4 297 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 DHTKD1Q96HY7 919 aaPredicted RBP6.86□□□□□ -1.31
LTBR-212ENST00000543542 SNX27Q96L92 541 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 C17orf80Q9BSJ5 609 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 KCTD10Q9H3F6 313 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 ZNF576Q9H609 170 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 CWH43Q9H720 699 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 NRDE2Q9H7Z3 1164 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 PLEKHA5Q9HAU0 1116 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 MIOSQ9NXC5 875 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 HCSTQ9UBK5 93 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 CPSF3Q9UKF6 684 aaKnown RBP6.86□□□□□ -1.31
LTBR-212ENST00000543542 FAN1Q9Y2M0 1017 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 PRG3Q9Y2Y8 225 aaPredicted RBP6.86□□□□□ -1.31
LTBR-212ENST00000543542 STYXL1Q9Y6J8 313 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 TRIP11Q15643 1979 aa6.86□□□□□ -1.31
LTBR-212ENST00000543542 LAMA2P24043 3122 aaKnown RBP6.85□□□□□ -1.31
LTBR-212ENST00000543542 TMEM265A0A087WTH1 108 aa6.85□□□□□ -1.31
LTBR-212ENST00000543542 SMIM28A0A1B0GU29 152 aa6.85□□□□□ -1.31
LTBR-212ENST00000543542 TRIM49BA6NDI0 452 aa6.85□□□□□ -1.31
LTBR-212ENST00000543542 PTGESO14684 152 aa6.85□□□□□ -1.31
LTBR-212ENST00000543542 NRP1O14786 923 aa6.85□□□□□ -1.31
LTBR-212ENST00000543542 LPXNO60711 386 aa6.85□□□□□ -1.31
LTBR-212ENST00000543542 TADA2AO75478 443 aa6.85□□□□□ -1.31
LTBR-212ENST00000543542 DDHD2O94830 711 aa6.85□□□□□ -1.31
LTBR-212ENST00000543542 FGFR1OPO95684 399 aaKnown RBP6.85□□□□□ -1.31
LTBR-212ENST00000543542 TNNC2P02585 160 aa6.85□□□□□ -1.31
LTBR-212ENST00000543542 RB1P06400 928 aa6.85□□□□□ -1.31
LTBR-212ENST00000543542 KRT19P08727 400 aa6.85□□□□□ -1.31
LTBR-212ENST00000543542 DLATP10515 647 aaKnown RBP6.85□□□□□ -1.31
LTBR-212ENST00000543542 EPB41P11171 864 aaKnown RBP6.85□□□□□ -1.31
LTBR-212ENST00000543542 KCNE1P15382 129 aa6.85□□□□□ -1.31
LTBR-212ENST00000543542 CD44P16070 742 aaKnown RBP6.85□□□□□ -1.31
LTBR-212ENST00000543542 TNNI1P19237 187 aa6.85□□□□□ -1.31
LTBR-212ENST00000543542 IGFBP4P22692 258 aa6.85□□□□□ -1.31
LTBR-212ENST00000543542 PPM1AP35813 382 aa6.85□□□□□ -1.31
LTBR-212ENST00000543542 PSMC2P35998 433 aaKnown RBP6.85□□□□□ -1.31
LTBR-212ENST00000543542 BMPR1AP36894 532 aa6.85□□□□□ -1.31
LTBR-212ENST00000543542 SLC11A1P49279 550 aa6.85□□□□□ -1.31
LTBR-212ENST00000543542 ERVK-21P61565 698 aa6.85□□□□□ -1.31
LTBR-212ENST00000543542 TFAMQ00059 246 aaKnown RBP6.85□□□□□ -1.31
LTBR-212ENST00000543542 LRRC63Q05C16 580 aa6.85□□□□□ -1.31
LTBR-212ENST00000543542 GPM6BQ13491 265 aa6.85□□□□□ -1.31
LTBR-212ENST00000543542 BMS1Q14692 1282 aaKnown RBP6.85□□□□□ -1.31
LTBR-212ENST00000543542 STX1AQ16623 288 aa6.85□□□□□ -1.31
LTBR-212ENST00000543542 EDRF1Q3B7T1 1238 aa6.85□□□□□ -1.31
LTBR-212ENST00000543542 SLC10A6Q3KNW5 377 aa6.85□□□□□ -1.31
LTBR-212ENST00000543542 CCDC40Q4G0X9 1142 aa6.85□□□□□ -1.31
LTBR-212ENST00000543542 EPC2Q52LR7 807 aa6.85□□□□□ -1.31
LTBR-212ENST00000543542 COBLL1Q53SF7 1204 aa6.85□□□□□ -1.31
LTBR-212ENST00000543542 ANKRD40Q6AI12 368 aa6.85□□□□□ -1.31
LTBR-212ENST00000543542 JADE1Q6IE81 842 aa6.85□□□□□ -1.31
LTBR-212ENST00000543542 LRRC55Q6ZSA7 311 aa6.85□□□□□ -1.31
LTBR-212ENST00000543542 USP37Q86T82 979 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms