RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 THP07101 528 aa13.24□□□□□ -0.29
DDX55-210ENST00000543016 FGFR1P11362 822 aa13.24□□□□□ -0.29
DDX55-210ENST00000543016 CD44P16070 742 aaKnown RBP13.24□□□□□ -0.29
DDX55-210ENST00000543016 NR2F2P24468 414 aa13.24□□□□□ -0.29
DDX55-210ENST00000543016 AKAP5P24588 427 aa13.24□□□□□ -0.29
DDX55-210ENST00000543016 PSMC2P35998 433 aaKnown RBP13.24□□□□□ -0.29
DDX55-210ENST00000543016 ACOT2P49753 483 aa13.24□□□□□ -0.29
DDX55-210ENST00000543016 CYP2J2P51589 502 aa13.24□□□□□ -0.29
DDX55-210ENST00000543016 OSTNP61366 133 aa13.24□□□□□ -0.29
DDX55-210ENST00000543016 ENOX2Q16206 610 aaKnown RBP13.24□□□□□ -0.29
DDX55-210ENST00000543016 SNRNP35Q16560 246 aaKnown RBP13.24□□□□□ -0.29
DDX55-210ENST00000543016 SLC10A6Q3KNW5 377 aa13.24□□□□□ -0.29
DDX55-210ENST00000543016 ANKRD40Q6AI12 368 aa13.24□□□□□ -0.29
DDX55-210ENST00000543016 KLHL10Q6JEL2 608 aa13.24□□□□□ -0.29
DDX55-210ENST00000543016 FAM117BQ6P1L5 589 aa13.24□□□□□ -0.29
DDX55-210ENST00000543016 CRELD2Q6UXH1 353 aaPredicted RBP13.24□□□□□ -0.29
DDX55-210ENST00000543016 ZC3H3Q8IXZ2 948 aaKnown RBP13.24□□□□□ -0.29
DDX55-210ENST00000543016 FIBCD1Q8N539 461 aa13.24□□□□□ -0.29
DDX55-210ENST00000543016 CEP120Q8N960 986 aa13.24□□□□□ -0.29
DDX55-210ENST00000543016 IKZF4Q9H2S9 585 aa13.24□□□□□ -0.29
DDX55-210ENST00000543016 PCIF1Q9H4Z3 704 aa13.24□□□□□ -0.29
DDX55-210ENST00000543016 RBAKQ9NYW8 714 aaPredicted RBP13.24□□□□□ -0.29
DDX55-210ENST00000543016 C2CD2Q9Y426 696 aa13.24□□□□□ -0.29
DDX55-210ENST00000543016 TMEM265A0A087WTH1 108 aa13.23□□□□□ -0.29
DDX55-210ENST00000543016 SLC16A3O15427 465 aaKnown RBP13.23□□□□□ -0.29
DDX55-210ENST00000543016 PRKCSHP14314 528 aaPredicted RBP13.23□□□□□ -0.29
DDX55-210ENST00000543016 CYP3A5P20815 502 aa13.23□□□□□ -0.29
DDX55-210ENST00000543016 IBSPP21815 317 aaPredicted RBP13.23□□□□□ -0.29
DDX55-210ENST00000543016 PAX3P23760 479 aa13.23□□□□□ -0.29
DDX55-210ENST00000543016 MLH1P40692 756 aa13.23□□□□□ -0.29
DDX55-210ENST00000543016 AP3M2P53677 418 aa13.23□□□□□ -0.29
DDX55-210ENST00000543016 MCCD1P59942 119 aaPredicted RBP13.23□□□□□ -0.29
DDX55-210ENST00000543016 RNASELQ05823 741 aaKnown RBP13.23□□□□□ -0.29
DDX55-210ENST00000543016 TYRO3Q06418 890 aa13.23□□□□□ -0.29
DDX55-210ENST00000543016 DPCR1Q3MIW9 517 aa13.23□□□□□ -0.29
DDX55-210ENST00000543016 TTI2Q6NXR4 508 aa13.23□□□□□ -0.29
DDX55-210ENST00000543016 INTS8Q75QN2 995 aaKnown RBP13.23□□□□□ -0.29
DDX55-210ENST00000543016 FILIP1Q7Z7B0 1213 aa13.23□□□□□ -0.29
DDX55-210ENST00000543016 GSTCDQ8NEC7 633 aa13.23□□□□□ -0.29
DDX55-210ENST00000543016 NOC3LQ8WTT2 800 aaKnown RBP13.23□□□□□ -0.29
DDX55-210ENST00000543016 CACTINQ8WUQ7 758 aaKnown RBP13.23□□□□□ -0.29
DDX55-210ENST00000543016 SAAL1Q96ER3 474 aa13.23□□□□□ -0.29
DDX55-210ENST00000543016 MFSD14AQ96MC6 490 aa13.23□□□□□ -0.29
DDX55-210ENST00000543016 FAM193BQ96PV7 902 aaPredicted RBP13.23□□□□□ -0.29
DDX55-210ENST00000543016 TMEM175Q9BSA9 504 aa13.23□□□□□ -0.29
DDX55-210ENST00000543016 ANP32EQ9BTT0 268 aa13.23□□□□□ -0.29
DDX55-210ENST00000543016 METTL14Q9HCE5 456 aaKnown RBP13.23□□□□□ -0.29
DDX55-210ENST00000543016 TBC1D13Q9NVG8 400 aa13.23□□□□□ -0.29
DDX55-210ENST00000543016 INPP5FQ9Y2H2 1132 aa13.23□□□□□ -0.29
DDX55-210ENST00000543016 SMIM28A0A1B0GU29 152 aa13.22□□□□□ -0.29
DDX55-210ENST00000543016 MEIS3P2A8K0S8 358 aa13.22□□□□□ -0.29
DDX55-210ENST00000543016 LACTBL1A8MY62 500 aa13.22□□□□□ -0.29
DDX55-210ENST00000543016 CXCL8P10145 99 aa13.22□□□□□ -0.29
DDX55-210ENST00000543016 EPB41P11171 864 aaKnown RBP13.22□□□□□ -0.29
DDX55-210ENST00000543016 LAG3P18627 525 aa13.22□□□□□ -0.29
DDX55-210ENST00000543016 TNFSF9P41273 254 aa13.22□□□□□ -0.29
DDX55-210ENST00000543016 PSMD6Q15008 389 aa13.22□□□□□ -0.29
DDX55-210ENST00000543016 ZBTB41Q5SVQ8 909 aa13.22□□□□□ -0.29
DDX55-210ENST00000543016 CBWD2Q8IUF1 395 aa13.22□□□□□ -0.29
DDX55-210ENST00000543016 TMEM192Q8IY95 271 aa13.22□□□□□ -0.29
DDX55-210ENST00000543016 CSGALNACT2Q8N6G5 542 aa13.22□□□□□ -0.29
DDX55-210ENST00000543016 TMC2Q8TDI7 906 aa13.22□□□□□ -0.29
DDX55-210ENST00000543016 CLP1Q92989 425 aaKnown RBP13.22□□□□□ -0.29
DDX55-210ENST00000543016 DDX27Q96GQ7 796 aaKnown RBP13.22□□□□□ -0.29
DDX55-210ENST00000543016 ZFP42Q96MM3 310 aa13.22□□□□□ -0.29
DDX55-210ENST00000543016 UROC1Q96N76 676 aa13.22□□□□□ -0.29
DDX55-210ENST00000543016 PPP1R10Q96QC0 940 aaKnown RBP13.22□□□□□ -0.29
DDX55-210ENST00000543016 PLVAPQ9BX97 442 aa13.22□□□□□ -0.29
DDX55-210ENST00000543016 PBX4Q9BYU1 374 aa13.22□□□□□ -0.29
DDX55-210ENST00000543016 KLK14Q9P0G3 267 aa13.22□□□□□ -0.29
DDX55-210ENST00000543016 STK39Q9UEW8 545 aa13.22□□□□□ -0.29
DDX55-210ENST00000543016 UBQLN1Q9UMX0 589 aaKnown RBP13.22□□□□□ -0.29
DDX55-210ENST00000543016 CTNND2Q9UQB3 1225 aa13.22□□□□□ -0.29
DDX55-210ENST00000543016 TRIOBPQ9H2D6 2365 aa13.22□□□□□ -0.29
DDX55-210ENST00000543016 GOLGA8IPA6NC78 632 aa13.21□□□□□ -0.29
DDX55-210ENST00000543016 GOLGA8JA6NMD2 632 aa13.21□□□□□ -0.29
DDX55-210ENST00000543016 GRXCR1A8MXD5 290 aa13.21□□□□□ -0.29
DDX55-210ENST00000543016 PTGESO14684 152 aa13.21□□□□□ -0.29
DDX55-210ENST00000543016 IKBKBO14920 756 aa13.21□□□□□ -0.29
DDX55-210ENST00000543016 ALDH2P05091 517 aa13.21□□□□□ -0.29
DDX55-210ENST00000543016 RB1P06400 928 aa13.21□□□□□ -0.29
DDX55-210ENST00000543016 KRT13P13646 458 aa13.21□□□□□ -0.29
DDX55-210ENST00000543016 RPL9P32969 192 aaKnown RBP13.21□□□□□ -0.29
DDX55-210ENST00000543016 PPM1AP35813 382 aa13.21□□□□□ -0.29
DDX55-210ENST00000543016 ALDH7A1P49419 539 aaKnown RBP13.21□□□□□ -0.29
DDX55-210ENST00000543016 SCNN1GP51170 649 aa13.21□□□□□ -0.29
DDX55-210ENST00000543016 RABGGTBP53611 331 aa13.21□□□□□ -0.29
DDX55-210ENST00000543016 PMS1P54277 932 aaKnown RBP13.21□□□□□ -0.29
DDX55-210ENST00000543016 CYP24A1Q07973 514 aa13.21□□□□□ -0.29
DDX55-210ENST00000543016 DSC1Q08554 894 aa13.21□□□□□ -0.29
DDX55-210ENST00000543016 TUSC3Q13454 348 aa13.21□□□□□ -0.29
DDX55-210ENST00000543016 ZBTB6Q15916 424 aa13.21□□□□□ -0.29
DDX55-210ENST00000543016 TPD52L1Q16890 204 aaPredicted RBP13.21□□□□□ -0.29
DDX55-210ENST00000543016 ZSCAN23Q3MJ62 389 aa13.21□□□□□ -0.29
DDX55-210ENST00000543016 SEZ6Q53EL9 994 aa13.21□□□□□ -0.29
DDX55-210ENST00000543016 CEP135Q66GS9 1140 aa13.21□□□□□ -0.29
DDX55-210ENST00000543016 FAM109BQ6ICB4 259 aaPredicted RBP13.21□□□□□ -0.29
DDX55-210ENST00000543016 GPR153Q6NV75 609 aa13.21□□□□□ -0.29
DDX55-210ENST00000543016 LRRC55Q6ZSA7 311 aa13.21□□□□□ -0.29
DDX55-210ENST00000543016 FRMD5Q7Z6J6 570 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms