RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 ELL2O00472 640 aaPredicted RBP6.8□□□□□ -1.32
XRCC4-206ENST00000542685 POU3F2P20265 443 aaPredicted RBP6.8□□□□□ -1.32
XRCC4-206ENST00000542685 TDO2P48775 406 aa6.8□□□□□ -1.32
XRCC4-206ENST00000542685 KPNA1P52294 538 aaPredicted RBP6.8□□□□□ -1.32
XRCC4-206ENST00000542685 ANAPC15P60006 121 aa6.8□□□□□ -1.32
XRCC4-206ENST00000542685 TGFB2P61812 414 aa6.8□□□□□ -1.32
XRCC4-206ENST00000542685 SMAD3P84022 425 aaKnown RBP6.8□□□□□ -1.32
XRCC4-206ENST00000542685 SART3Q15020 963 aaKnown RBP6.8□□□□□ -1.32
XRCC4-206ENST00000542685 PWP2Q15269 919 aaKnown RBP6.8□□□□□ -1.32
XRCC4-206ENST00000542685 CT47A1Q5JQC4 288 aaPredicted RBP6.8□□□□□ -1.32
XRCC4-206ENST00000542685 CAVIN1Q6NZI2 390 aaKnown RBP6.8□□□□□ -1.32
XRCC4-206ENST00000542685 SUGP1Q8IWZ8 645 aaKnown RBP6.8□□□□□ -1.32
XRCC4-206ENST00000542685 ELOA2Q8IYF1 753 aaPredicted RBP6.8□□□□□ -1.32
XRCC4-206ENST00000542685 NEU4Q8WWR8 484 aaPredicted RBP6.8□□□□□ -1.32
XRCC4-206ENST00000542685 ITFG2Q969R8 447 aa6.8□□□□□ -1.32
XRCC4-206ENST00000542685 HIST1H2AHQ96KK5 128 aa6.8□□□□□ -1.32
XRCC4-206ENST00000542685 GPR101Q96P66 508 aaPredicted RBP6.8□□□□□ -1.32
XRCC4-206ENST00000542685 UIMC1Q96RL1 719 aa6.8□□□□□ -1.32
XRCC4-206ENST00000542685 HIST1H2AJQ99878 128 aa6.8□□□□□ -1.32
XRCC4-206ENST00000542685 SOX7Q9BT81 388 aa6.8□□□□□ -1.32
XRCC4-206ENST00000542685 MENTQ9BUN1 341 aa6.8□□□□□ -1.32
XRCC4-206ENST00000542685 GPR87Q9BY21 358 aa6.8□□□□□ -1.32
XRCC4-206ENST00000542685 TRIM8Q9BZR9 551 aa6.8□□□□□ -1.32
XRCC4-206ENST00000542685 SLC2A4RGQ9NR83 387 aa6.8□□□□□ -1.32
XRCC4-206ENST00000542685 CTNNA3Q9UI47 895 aa6.8□□□□□ -1.32
XRCC4-206ENST00000542685 MSRAQ9UJ68 235 aa6.8□□□□□ -1.32
XRCC4-206ENST00000542685 MRPL42Q9Y6G3 142 aaKnown RBP6.8□□□□□ -1.32
XRCC4-206ENST00000542685 ZC3H13Q5T200 1668 aaKnown RBP6.8□□□□□ -1.32
XRCC4-206ENST00000542685 DISP3Q9P2K9 1392 aa6.8□□□□□ -1.32
XRCC4-206ENST00000542685 SBNO2Q9Y2G9 1366 aa6.8□□□□□ -1.32
XRCC4-206ENST00000542685 ATP10BO94823 1461 aa6.79□□□□□ -1.32
XRCC4-206ENST00000542685 MYOM2P54296 1465 aa6.79□□□□□ -1.32
XRCC4-206ENST00000542685 IQSEC2Q5JU85 1478 aa6.79□□□□□ -1.32
XRCC4-206ENST00000542685 ADGRB2O60241 1585 aa6.79□□□□□ -1.32
XRCC4-206ENST00000542685 VWDEQ8N2E2 1590 aa6.79□□□□□ -1.32
XRCC4-206ENST00000542685 SETBP1Q9Y6X0 1596 aa6.79□□□□□ -1.32
XRCC4-206ENST00000542685 RTEL1-TNFRSF6BF6WH68 1400 aa6.79□□□□□ -1.32
XRCC4-206ENST00000542685 A0A1B0GUL7 405 aa6.79□□□□□ -1.32
XRCC4-206ENST00000542685 TGM5O43548 720 aa6.79□□□□□ -1.32
XRCC4-206ENST00000542685 CDC45O75419 566 aa6.79□□□□□ -1.32
XRCC4-206ENST00000542685 FSBPO95073 299 aa6.79□□□□□ -1.32
XRCC4-206ENST00000542685 CYP2C19P33261 490 aa6.79□□□□□ -1.32
XRCC4-206ENST00000542685 MAN2A2P49641 1150 aa6.79□□□□□ -1.32
XRCC4-206ENST00000542685 NPEPPSP55786 919 aa6.79□□□□□ -1.32
XRCC4-206ENST00000542685 GSCP56915 257 aaPredicted RBP6.79□□□□□ -1.32
XRCC4-206ENST00000542685 TMF1P82094 1093 aa6.79□□□□□ -1.32
XRCC4-206ENST00000542685 LRRC32Q14392 662 aa6.79□□□□□ -1.32
XRCC4-206ENST00000542685 MAN2A1Q16706 1144 aa6.79□□□□□ -1.32
XRCC4-206ENST00000542685 CMTM4Q8IZR5 234 aa6.79□□□□□ -1.32
XRCC4-206ENST00000542685 MB21D1Q8N884 522 aa6.79□□□□□ -1.32
XRCC4-206ENST00000542685 FAM184AQ8NB25 1140 aa6.79□□□□□ -1.32
XRCC4-206ENST00000542685 ZNF483Q8TF39 744 aaPredicted RBP6.79□□□□□ -1.32
XRCC4-206ENST00000542685 PGBD4Q96DM1 585 aa6.79□□□□□ -1.32
XRCC4-206ENST00000542685 ZNF496Q96IT1 587 aaPredicted RBP6.79□□□□□ -1.32
XRCC4-206ENST00000542685 TARS2Q9BW92 718 aaKnown RBP6.79□□□□□ -1.32
XRCC4-206ENST00000542685 OSBPL6Q9BZF3 934 aa6.79□□□□□ -1.32
XRCC4-206ENST00000542685 SLITRK6Q9H5Y7 841 aa6.79□□□□□ -1.32
XRCC4-206ENST00000542685 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.79□□□□□ -1.32
XRCC4-206ENST00000542685 RSPH14Q9UHP6 348 aa6.79□□□□□ -1.32
XRCC4-206ENST00000542685 MYPNQ86TC9 1320 aa6.78□□□□□ -1.32
XRCC4-206ENST00000542685 PPRC1Q5VV67 1664 aaKnown RBP6.78□□□□□ -1.32
XRCC4-206ENST00000542685 LCHNA4D1U4 455 aa6.78□□□□□ -1.32
XRCC4-206ENST00000542685 KLHL33A6NCF5 533 aa6.78□□□□□ -1.32
XRCC4-206ENST00000542685 ADH4P08319 380 aa6.78□□□□□ -1.32
XRCC4-206ENST00000542685 SCNN1BP51168 640 aa6.78□□□□□ -1.32
XRCC4-206ENST00000542685 TEX35Q5T0J7 233 aa6.78□□□□□ -1.32
XRCC4-206ENST00000542685 ZNF662Q6ZS27 426 aa6.78□□□□□ -1.32
XRCC4-206ENST00000542685 ESPNLQ6ZVH7 1005 aa6.78□□□□□ -1.32
XRCC4-206ENST00000542685 SMC1BQ8NDV3 1235 aa6.78□□□□□ -1.32
XRCC4-206ENST00000542685 TBC1D22AQ8WUA7 517 aa6.78□□□□□ -1.32
XRCC4-206ENST00000542685 FERMT2Q96AC1 680 aa6.78□□□□□ -1.32
XRCC4-206ENST00000542685 CLIP3Q96DZ5 547 aa6.78□□□□□ -1.32
XRCC4-206ENST00000542685 ZNF512Q96ME7 567 aaPredicted RBP6.78□□□□□ -1.32
XRCC4-206ENST00000542685 PAIP2Q9BPZ3 127 aaKnown RBP6.78□□□□□ -1.32
XRCC4-206ENST00000542685 ING3Q9NXR8 418 aa6.78□□□□□ -1.32
XRCC4-206ENST00000542685 USP18Q9UMW8 372 aa6.78□□□□□ -1.32
XRCC4-206ENST00000542685 PCDHB6Q9Y5E3 794 aa6.78□□□□□ -1.32
XRCC4-206ENST00000542685 V9GYY5 206 aaPredicted RBP6.78□□□□□ -1.32
XRCC4-206ENST00000542685 PTPRTO14522 1441 aa6.77□□□□□ -1.33
XRCC4-206ENST00000542685 SYCP2Q9BX26 1530 aa6.77□□□□□ -1.33
XRCC4-206ENST00000542685 ABCA6Q8N139 1617 aa6.77□□□□□ -1.33
XRCC4-206ENST00000542685 MAP3K4Q9Y6R4 1608 aa6.77□□□□□ -1.33
XRCC4-206ENST00000542685 CTAGE5O15320 804 aa6.77□□□□□ -1.33
XRCC4-206ENST00000542685 MFAP3LO75121 409 aa6.77□□□□□ -1.33
XRCC4-206ENST00000542685 GAAP10253 952 aa6.77□□□□□ -1.33
XRCC4-206ENST00000542685 MAKP20794 623 aa6.77□□□□□ -1.33
XRCC4-206ENST00000542685 U2AF2P26368 475 aaKnown RBP eCLIP6.77□□□□□ -1.33
XRCC4-206ENST00000542685 SLFN5Q08AF3 891 aa6.77□□□□□ -1.33
XRCC4-206ENST00000542685 GPS2Q13227 327 aa6.77□□□□□ -1.33
XRCC4-206ENST00000542685 OS9Q13438 667 aaPredicted RBP6.77□□□□□ -1.33
XRCC4-206ENST00000542685 SPIDRQ14159 915 aa6.77□□□□□ -1.33
XRCC4-206ENST00000542685 MFSD5Q6N075 450 aa6.77□□□□□ -1.33
XRCC4-206ENST00000542685 CERS3Q8IU89 383 aa6.77□□□□□ -1.33
XRCC4-206ENST00000542685 PPM1KQ8N3J5 372 aa6.77□□□□□ -1.33
XRCC4-206ENST00000542685 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.77□□□□□ -1.33
XRCC4-206ENST00000542685 ATXN2LQ8WWM7 1075 aaKnown RBP6.77□□□□□ -1.33
XRCC4-206ENST00000542685 CEP89Q96ST8 783 aa6.77□□□□□ -1.33
XRCC4-206ENST00000542685 MS4A5Q9H3V2 200 aa6.77□□□□□ -1.33
XRCC4-206ENST00000542685 PAXBP1Q9Y5B6 917 aa6.77□□□□□ -1.33
XRCC4-206ENST00000542685 STC2O76061 302 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms