RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 LGR5O75473 907 aa10.59□□□□□ -0.71
SS18-205ENST00000542420 ERLIN2O94905 339 aa10.59□□□□□ -0.71
SS18-205ENST00000542420 SGPL1O95470 568 aa10.59□□□□□ -0.71
SS18-205ENST00000542420 C4BPAP04003 597 aaKnown RBP10.59□□□□□ -0.71
SS18-205ENST00000542420 MAN1A1P33908 653 aa10.59□□□□□ -0.71
SS18-205ENST00000542420 IREB2P48200 963 aaKnown RBP10.59□□□□□ -0.71
SS18-205ENST00000542420 CLEC16AQ2KHT3 1053 aa10.59□□□□□ -0.71
SS18-205ENST00000542420 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.59□□□□□ -0.71
SS18-205ENST00000542420 EP400NLQ6ZTU2 488 aa10.59□□□□□ -0.71
SS18-205ENST00000542420 ANKRD35Q8N283 1001 aa10.59□□□□□ -0.71
SS18-205ENST00000542420 DEPTORQ8TB45 409 aa10.59□□□□□ -0.71
SS18-205ENST00000542420 SLCO2A1Q92959 643 aa10.59□□□□□ -0.71
SS18-205ENST00000542420 CGRRF1Q99675 332 aa10.59□□□□□ -0.71
SS18-205ENST00000542420 AGO2Q9UKV8 859 aaKnown RBP10.59□□□□□ -0.71
SS18-205ENST00000542420 COG5Q9UP83 839 aa10.59□□□□□ -0.71
SS18-205ENST00000542420 PCDHA3Q9Y5H8 950 aa10.59□□□□□ -0.71
SS18-205ENST00000542420 TMEM150BA6NC51 233 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 GOLGA8IPA6NC78 632 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 UNCXA6NJT0 531 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 GOLGA8JA6NMD2 632 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 ZEB2O60315 1214 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 MAFO75444 373 aaPredicted RBP10.58□□□□□ -0.72
SS18-205ENST00000542420 FARP2O94887 1054 aaPredicted RBP10.58□□□□□ -0.72
SS18-205ENST00000542420 POTEJP0CG39 1038 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 ABCB4P21439 1286 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 ECHS1P30084 290 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 FNTAP49354 379 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 PEX5P50542 639 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 EIF3BP55884 814 aaKnown RBP10.58□□□□□ -0.72
SS18-205ENST00000542420 BIRC3Q13489 604 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 IER5Q5VY09 327 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 METTL7BQ6UX53 244 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 RUFY4Q6ZNE9 571 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 SYDE1Q6ZW31 735 aaPredicted RBP10.58□□□□□ -0.72
SS18-205ENST00000542420 KLHL7Q8IXQ5 586 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 ARFGAP2Q8N6H7 521 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 TSEN2Q8NCE0 465 aaKnown RBP10.58□□□□□ -0.72
SS18-205ENST00000542420 ZNF564Q8TBZ8 553 aaPredicted RBP10.58□□□□□ -0.72
SS18-205ENST00000542420 TAS1R2Q8TE23 839 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 SAAL1Q96ER3 474 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 BICD1Q96G01 975 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 ZIM3Q96PE6 472 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 FNBP1Q96RU3 617 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 PCDHB18PQ96TA0 734 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 SPATC1LQ9H0A9 340 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 C2orf40Q9H1Z8 148 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 SEPT11Q9NVA2 429 aaKnown RBP10.58□□□□□ -0.72
SS18-205ENST00000542420 TAS2R14Q9NYV8 317 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 MTUS1Q9ULD2 1270 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 KCNH4Q9UQ05 1017 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 ADGRA2Q96PE1 1338 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 A0A0B4J269 797 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 CYP26A1O43174 497 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 ADCY3O60266 1144 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 FGGP02679 453 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 CYP1A1P04798 512 aaPredicted RBP10.58□□□□□ -0.72
SS18-205ENST00000542420 UNGP13051 313 aaPredicted RBP10.58□□□□□ -0.72
SS18-205ENST00000542420 ATP4AP20648 1035 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 GLRA2P23416 452 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 VGLL4Q14135 290 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 MTERF2Q49AM1 385 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 AGBL2Q5U5Z8 902 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 DCAF12L1Q5VU92 463 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 CDCA2Q69YH5 1023 aaPredicted RBP10.58□□□□□ -0.72
SS18-205ENST00000542420 KDM7AQ6ZMT4 941 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 PLPPR4Q7Z2D5 763 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 PACS2Q86VP3 889 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 ERO1BQ86YB8 467 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 PALB2Q86YC2 1186 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 FBXO41Q8TF61 875 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 SEPT1Q8WYJ6 367 aa10.58□□□□□ -0.72
SS18-205ENST00000542420 GSTTP1A0A1W2PQM5 241 aa10.57□□□□□ -0.72
SS18-205ENST00000542420 K7ERI5 159 aa10.57□□□□□ -0.72
SS18-205ENST00000542420 GRIN3BO60391 1043 aa10.57□□□□□ -0.72
SS18-205ENST00000542420 UBA1P22314 1058 aaKnown RBP10.57□□□□□ -0.72
SS18-205ENST00000542420 HIRAP54198 1017 aaPredicted RBP10.57□□□□□ -0.72
SS18-205ENST00000542420 CENPCQ03188 943 aa10.57□□□□□ -0.72
SS18-205ENST00000542420 MXD4Q14582 209 aaPredicted RBP10.57□□□□□ -0.72
SS18-205ENST00000542420 DUPD1Q68J44 220 aa10.57□□□□□ -0.72
SS18-205ENST00000542420 SHCBP1Q8NEM2 672 aa10.57□□□□□ -0.72
SS18-205ENST00000542420 IFT81Q8WYA0 676 aa10.57□□□□□ -0.72
SS18-205ENST00000542420 CCDC127Q96BQ5 260 aa10.57□□□□□ -0.72
SS18-205ENST00000542420 ERP44Q9BS26 406 aa10.57□□□□□ -0.72
SS18-205ENST00000542420 FAM124BQ9H5Z6 455 aaPredicted RBP10.57□□□□□ -0.72
SS18-205ENST00000542420 TRPC6Q9Y210 931 aa10.57□□□□□ -0.72
SS18-205ENST00000542420 RRP15Q9Y3B9 282 aaKnown RBP10.57□□□□□ -0.72
SS18-205ENST00000542420 PLXNA1Q9UIW2 1896 aa10.57□□□□□ -0.72
SS18-205ENST00000542420 SCN4AP35499 1836 aa10.57□□□□□ -0.72
SS18-205ENST00000542420 IGKV6-21A0A0C4DH24 114 aa10.57□□□□□ -0.72
SS18-205ENST00000542420 GOLGA6L10A6NI86 522 aa10.57□□□□□ -0.72
SS18-205ENST00000542420 RWDD2BP57060 319 aa10.57□□□□□ -0.72
SS18-205ENST00000542420 SP2Q02086 613 aa10.57□□□□□ -0.72
SS18-205ENST00000542420 POU5F1BQ06416 359 aa10.57□□□□□ -0.72
SS18-205ENST00000542420 PPIL2Q13356 520 aa10.57□□□□□ -0.72
SS18-205ENST00000542420 CYFIP1Q7L576 1253 aa10.57□□□□□ -0.72
SS18-205ENST00000542420 SLC47A2Q86VL8 602 aa10.57□□□□□ -0.72
SS18-205ENST00000542420 BRSK2Q8IWQ3 736 aa10.57□□□□□ -0.72
SS18-205ENST00000542420 ZSWIM2Q8NEG5 633 aa10.57□□□□□ -0.72
SS18-205ENST00000542420 PIK3R5Q8WYR1 880 aa10.57□□□□□ -0.72
SS18-205ENST00000542420 DCPSQ96C86 337 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms