RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 LRRC32Q14392 662 aa10.92□□□□□ -0.66
CHFR-220ENST00000541817 PON2Q15165 354 aa10.92□□□□□ -0.66
CHFR-220ENST00000541817 PSMD5Q16401 504 aa10.92□□□□□ -0.66
CHFR-220ENST00000541817 TYW1BQ6NUM6 668 aa10.92□□□□□ -0.66
CHFR-220ENST00000541817 CTCFLQ8NI51 663 aaPredicted RBP10.92□□□□□ -0.66
CHFR-220ENST00000541817 LNX1Q8TBB1 728 aaPredicted RBP10.92□□□□□ -0.66
CHFR-220ENST00000541817 FAM167AQ96KS9 214 aa10.92□□□□□ -0.66
CHFR-220ENST00000541817 ZNF577Q9BSK1 485 aa10.92□□□□□ -0.66
CHFR-220ENST00000541817 TMEM9BQ9NQ34 198 aa10.92□□□□□ -0.66
CHFR-220ENST00000541817 GDE1Q9NZC3 331 aa10.92□□□□□ -0.66
CHFR-220ENST00000541817 DACH1Q9UI36 760 aa10.92□□□□□ -0.66
CHFR-220ENST00000541817 IPPQ9Y573 584 aa10.92□□□□□ -0.66
CHFR-220ENST00000541817 KIF26AQ9ULI4 1882 aaPredicted RBP10.91□□□□□ -0.66
CHFR-220ENST00000541817 SHROOM3Q8TF72 1996 aa10.91□□□□□ -0.66
CHFR-220ENST00000541817 IGLV3-22A0A075B6J6 115 aa10.91□□□□□ -0.66
CHFR-220ENST00000541817 ZNF263O14978 683 aa10.91□□□□□ -0.66
CHFR-220ENST00000541817 NR1I2O75469 434 aa10.91□□□□□ -0.66
CHFR-220ENST00000541817 C1QL1O75973 258 aa10.91□□□□□ -0.66
CHFR-220ENST00000541817 HOXA11P31270 313 aaPredicted RBP10.91□□□□□ -0.66
CHFR-220ENST00000541817 OR1D2P34982 312 aa10.91□□□□□ -0.66
CHFR-220ENST00000541817 CCR2P41597 374 aa10.91□□□□□ -0.66
CHFR-220ENST00000541817 KPNA1P52294 538 aaPredicted RBP10.91□□□□□ -0.66
CHFR-220ENST00000541817 SIM1P81133 766 aaPredicted RBP10.91□□□□□ -0.66
CHFR-220ENST00000541817 FAM171A1Q5VUB5 890 aa10.91□□□□□ -0.66
CHFR-220ENST00000541817 ZNF746Q6NUN9 644 aaPredicted RBP10.91□□□□□ -0.66
CHFR-220ENST00000541817 HSCBQ8IWL3 235 aa10.91□□□□□ -0.66
CHFR-220ENST00000541817 ZNF654Q8IZM8 581 aa10.91□□□□□ -0.66
CHFR-220ENST00000541817 HS6ST3Q8IZP7 471 aa10.91□□□□□ -0.66
CHFR-220ENST00000541817 ZNF710Q8N1W2 664 aa10.91□□□□□ -0.66
CHFR-220ENST00000541817 CORO1BQ9BR76 489 aa10.91□□□□□ -0.66
CHFR-220ENST00000541817 DSCC1Q9BVC3 393 aa10.91□□□□□ -0.66
CHFR-220ENST00000541817 INO80BQ9C086 356 aaPredicted RBP10.91□□□□□ -0.66
CHFR-220ENST00000541817 IFT122Q9HBG6 1241 aa10.91□□□□□ -0.66
CHFR-220ENST00000541817 KLK14Q9P0G3 267 aa10.91□□□□□ -0.66
CHFR-220ENST00000541817 SEPT9Q9UHD8 586 aaPredicted RBP10.91□□□□□ -0.66
CHFR-220ENST00000541817 RAXQ9Y2V3 346 aa10.91□□□□□ -0.66
CHFR-220ENST00000541817 NUP205Q92621 2012 aa10.91□□□□□ -0.66
CHFR-220ENST00000541817 TENM4Q6N022 2769 aa10.9□□□□□ -0.66
CHFR-220ENST00000541817 VWA8A3KMH1 1905 aa10.9□□□□□ -0.66
CHFR-220ENST00000541817 ADAMTS3O15072 1205 aa10.9□□□□□ -0.66
CHFR-220ENST00000541817 CHMP2AO43633 222 aa10.9□□□□□ -0.66
CHFR-220ENST00000541817 SRGAP2CP0DJJ0 459 aa10.9□□□□□ -0.66
CHFR-220ENST00000541817 PLA2G2AP14555 144 aa10.9□□□□□ -0.66
CHFR-220ENST00000541817 PSMC3P17980 439 aa10.9□□□□□ -0.66
CHFR-220ENST00000541817 AKAP5P24588 427 aa10.9□□□□□ -0.66
CHFR-220ENST00000541817 IGFBP6P24592 240 aaPredicted RBP10.9□□□□□ -0.66
CHFR-220ENST00000541817 ANTXR2P58335 489 aa10.9□□□□□ -0.66
CHFR-220ENST00000541817 FAM193AP78312 1265 aa10.9□□□□□ -0.66
CHFR-220ENST00000541817 IRX4P78413 519 aa10.9□□□□□ -0.66
CHFR-220ENST00000541817 CREMQ03060 361 aa10.9□□□□□ -0.66
CHFR-220ENST00000541817 TRDNQ13061 729 aa10.9□□□□□ -0.66
CHFR-220ENST00000541817 TARBP2Q15633 366 aaKnown RBP10.9□□□□□ -0.66
CHFR-220ENST00000541817 JAKMIP3Q5VZ66 844 aa10.9□□□□□ -0.66
CHFR-220ENST00000541817 PLEKHM2Q8IWE5 1019 aa10.9□□□□□ -0.66
CHFR-220ENST00000541817 MDM1Q8TC05 714 aa10.9□□□□□ -0.66
CHFR-220ENST00000541817 CSGALNACT1Q8TDX6 532 aa10.9□□□□□ -0.66
CHFR-220ENST00000541817 GJA10Q969M2 543 aa10.9□□□□□ -0.66
CHFR-220ENST00000541817 RSPRY1Q96DX4 576 aa10.9□□□□□ -0.66
CHFR-220ENST00000541817 CPB2Q96IY4 423 aa10.9□□□□□ -0.66
CHFR-220ENST00000541817 ZC3H10Q96K80 434 aaKnown RBP10.9□□□□□ -0.66
CHFR-220ENST00000541817 ASB16Q96NS5 453 aa10.9□□□□□ -0.66
CHFR-220ENST00000541817 CEP89Q96ST8 783 aa10.9□□□□□ -0.66
CHFR-220ENST00000541817 IL25Q9H293 177 aa10.9□□□□□ -0.66
CHFR-220ENST00000541817 SNTG2Q9NY99 539 aa10.9□□□□□ -0.66
CHFR-220ENST00000541817 BCLAF3A2AJT9 711 aaKnown RBP10.89□□□□□ -0.67
CHFR-220ENST00000541817 WDR27A2RRH5 827 aa10.89□□□□□ -0.67
CHFR-220ENST00000541817 CASTOR2A6NHX0 329 aa10.89□□□□□ -0.67
CHFR-220ENST00000541817 HEPACAM2A8MVW5 462 aa10.89□□□□□ -0.67
CHFR-220ENST00000541817 SPECC1L-ADORA2AF8WAN1 911 aa10.89□□□□□ -0.67
CHFR-220ENST00000541817 ARNTLO00327 626 aa10.89□□□□□ -0.67
CHFR-220ENST00000541817 PTPN2P17706 415 aa10.89□□□□□ -0.67
CHFR-220ENST00000541817 HOXA6P31267 233 aa10.89□□□□□ -0.67
CHFR-220ENST00000541817 SREBF1P36956 1147 aa10.89□□□□□ -0.67
CHFR-220ENST00000541817 MAPK8P45983 427 aa10.89□□□□□ -0.67
CHFR-220ENST00000541817 DNM2P50570 870 aa10.89□□□□□ -0.67
CHFR-220ENST00000541817 NAPAP54920 295 aa10.89□□□□□ -0.67
CHFR-220ENST00000541817 PRSS36Q5K4E3 855 aa10.89□□□□□ -0.67
CHFR-220ENST00000541817 DGKKQ5KSL6 1271 aa10.89□□□□□ -0.67
CHFR-220ENST00000541817 WWC2Q6AWC2 1192 aa10.89□□□□□ -0.67
CHFR-220ENST00000541817 ZNF410Q86VK4 478 aa10.89□□□□□ -0.67
CHFR-220ENST00000541817 SMAP1Q8IYB5 467 aaPredicted RBP10.89□□□□□ -0.67
CHFR-220ENST00000541817 IGDCC4Q8TDY8 1250 aa10.89□□□□□ -0.67
CHFR-220ENST00000541817 ZFYVE19Q96K21 471 aa10.89□□□□□ -0.67
CHFR-220ENST00000541817 HHIPQ96QV1 700 aa10.89□□□□□ -0.67
CHFR-220ENST00000541817 TTPALQ9BTX7 342 aa10.89□□□□□ -0.67
CHFR-220ENST00000541817 RIC8AQ9NPQ8 531 aa10.89□□□□□ -0.67
CHFR-220ENST00000541817 TRPV5Q9NQA5 729 aa10.89□□□□□ -0.67
CHFR-220ENST00000541817 DISC1Q9NRI5 854 aa10.89□□□□□ -0.67
CHFR-220ENST00000541817 ASCC3Q8N3C0 2202 aaKnown RBP10.89□□□□□ -0.67
CHFR-220ENST00000541817 NAV2Q8IVL1 2488 aa10.89□□□□□ -0.67
CHFR-220ENST00000541817 KHNYNO15037 678 aaKnown RBP10.88□□□□□ -0.67
CHFR-220ENST00000541817 CDC45O75419 566 aa10.88□□□□□ -0.67
CHFR-220ENST00000541817 KIF4AO95239 1232 aa10.88□□□□□ -0.67
CHFR-220ENST00000541817 CALM1P0DP23 149 aa10.88□□□□□ -0.67
CHFR-220ENST00000541817 CALM2P0DP24 149 aa10.88□□□□□ -0.67
CHFR-220ENST00000541817 CALM3P0DP25 149 aa10.88□□□□□ -0.67
CHFR-220ENST00000541817 GBP1P32455 592 aa10.88□□□□□ -0.67
CHFR-220ENST00000541817 HSP90AA2PQ14568 343 aaPredicted RBP10.88□□□□□ -0.67
CHFR-220ENST00000541817 GSE1Q14687 1217 aa10.88□□□□□ -0.67
CHFR-220ENST00000541817 NIPA1Q7RTP0 329 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms