RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 AMHR2Q16671 573 aa30.13■■■□□ 2.41
CCM2-218ENST00000541586 RRAGDQ9NQL2 400 aaPredicted RBP30.13■■■□□ 2.41
CCM2-218ENST00000541586 ANKFY1Q9P2R3 1169 aa30.13■■■□□ 2.41
CCM2-218ENST00000541586 TNRC18O15417 2968 aaPredicted RBP30.13■■■□□ 2.41
CCM2-218ENST00000541586 GTPBP10A4D1E9 387 aaKnown RBP30.13■■■□□ 2.41
CCM2-218ENST00000541586 KIAA0391O15091 583 aaKnown RBP30.13■■■□□ 2.41
CCM2-218ENST00000541586 ZSCAN20P17040 1043 aaPredicted RBP30.13■■■□□ 2.41
CCM2-218ENST00000541586 IBSPP21815 317 aaPredicted RBP30.13■■■□□ 2.41
CCM2-218ENST00000541586 MAGEA10P43363 369 aaPredicted RBP30.13■■■□□ 2.41
CCM2-218ENST00000541586 ZBED6P86452 979 aa30.13■■■□□ 2.41
CCM2-218ENST00000541586 EXOC3L4Q17RC7 722 aa30.13■■■□□ 2.41
CCM2-218ENST00000541586 TCTN1Q2MV58 587 aa30.13■■■□□ 2.41
CCM2-218ENST00000541586 OR8K1Q8NGG5 319 aa30.13■■■□□ 2.41
CCM2-218ENST00000541586 DNAJC7Q99615 494 aa30.13■■■□□ 2.41
CCM2-218ENST00000541586 ACO2Q99798 780 aaKnown RBP30.13■■■□□ 2.41
CCM2-218ENST00000541586 FAM213AQ9BRX8 229 aa30.13■■■□□ 2.41
CCM2-218ENST00000541586 AGO2Q9UKV8 859 aaKnown RBP30.13■■■□□ 2.41
CCM2-218ENST00000541586 TANC1Q9C0D5 1861 aa30.12■■■□□ 2.41
CCM2-218ENST00000541586 A0A0B4J269 797 aa30.12■■■□□ 2.41
CCM2-218ENST00000541586 EXTL3O43909 919 aa30.12■■■□□ 2.41
CCM2-218ENST00000541586 ARF4P18085 180 aaPredicted RBP30.12■■■□□ 2.41
CCM2-218ENST00000541586 FAM187BQ17R55 369 aa30.12■■■□□ 2.41
CCM2-218ENST00000541586 CBWD6Q4V339 395 aa30.12■■■□□ 2.41
CCM2-218ENST00000541586 CBWD3Q5JTY5 395 aa30.12■■■□□ 2.41
CCM2-218ENST00000541586 CBWD5Q5RIA9 395 aa30.12■■■□□ 2.41
CCM2-218ENST00000541586 GBP6Q6ZN66 633 aa30.12■■■□□ 2.41
CCM2-218ENST00000541586 PRIMPOLQ96LW4 560 aa30.12■■■□□ 2.41
CCM2-218ENST00000541586 MFSD14AQ96MC6 490 aa30.12■■■□□ 2.41
CCM2-218ENST00000541586 KIAA1586Q9HCI6 787 aa30.12■■■□□ 2.41
CCM2-218ENST00000541586 NOL4O94818 638 aa30.11■■■□□ 2.41
CCM2-218ENST00000541586 FECHP22830 423 aa30.11■■■□□ 2.41
CCM2-218ENST00000541586 HOXA11P31270 313 aaPredicted RBP30.11■■■□□ 2.41
CCM2-218ENST00000541586 MATR3P43243 847 aaKnown RBP eCLIP30.11■■■□□ 2.41
CCM2-218ENST00000541586 EPHB4P54760 987 aa30.11■■■□□ 2.41
CCM2-218ENST00000541586 PCBP1Q15365 356 aaKnown RBP eCLIP30.11■■■□□ 2.41
CCM2-218ENST00000541586 C1orf220Q5T0J3 134 aa30.11■■■□□ 2.41
CCM2-218ENST00000541586 C16orf59Q7L2K0 433 aa30.11■■■□□ 2.41
CCM2-218ENST00000541586 OTOP2Q7RTS6 562 aa30.11■■■□□ 2.41
CCM2-218ENST00000541586 ZNF397Q8NF99 534 aaPredicted RBP30.11■■■□□ 2.41
CCM2-218ENST00000541586 MSTO1Q9BUK6 570 aa30.11■■■□□ 2.41
CCM2-218ENST00000541586 NAA15Q9BXJ9 866 aaKnown RBP30.11■■■□□ 2.41
CCM2-218ENST00000541586 TOM1L1O75674 476 aa30.1■■■□□ 2.41
CCM2-218ENST00000541586 SLC9A1P19634 815 aa30.1■■■□□ 2.41
CCM2-218ENST00000541586 PON1P27169 355 aa30.1■■■□□ 2.41
CCM2-218ENST00000541586 APBA1Q02410 837 aa30.1■■■□□ 2.41
CCM2-218ENST00000541586 CYP24A1Q07973 514 aa30.1■■■□□ 2.41
CCM2-218ENST00000541586 TWF2Q6IBS0 349 aaKnown RBP30.1■■■□□ 2.41
CCM2-218ENST00000541586 CNKSR3Q6P9H4 555 aa30.1■■■□□ 2.41
CCM2-218ENST00000541586 ZNF365Q70YC5 407 aa30.1■■■□□ 2.41
CCM2-218ENST00000541586 APBB2Q92870 758 aa30.1■■■□□ 2.41
CCM2-218ENST00000541586 ADAM2Q99965 735 aa30.1■■■□□ 2.41
CCM2-218ENST00000541586 GCNT4Q9P109 453 aa30.1■■■□□ 2.41
CCM2-218ENST00000541586 ZNF233A6NK53 670 aa30.1■■■□□ 2.41
CCM2-218ENST00000541586 CLDN3O15551 220 aa30.1■■■□□ 2.41
CCM2-218ENST00000541586 ARHGAP6O43182 974 aa30.1■■■□□ 2.41
CCM2-218ENST00000541586 MGEA5O60502 916 aa30.1■■■□□ 2.41
CCM2-218ENST00000541586 IKBKEQ14164 716 aa30.1■■■□□ 2.41
CCM2-218ENST00000541586 DPY19L2P1Q6NXN4 242 aa30.1■■■□□ 2.41
CCM2-218ENST00000541586 PARD3BQ8TEW8 1205 aa30.1■■■□□ 2.41
CCM2-218ENST00000541586 EDEM3Q9BZQ6 932 aa30.1■■■□□ 2.41
CCM2-218ENST00000541586 PLCB1Q9NQ66 1216 aa30.1■■■□□ 2.41
CCM2-218ENST00000541586 FGBP02675 491 aa30.09■■■□□ 2.41
CCM2-218ENST00000541586 PFKMP08237 780 aa30.09■■■□□ 2.41
CCM2-218ENST00000541586 PPP3CAQ08209 521 aa30.09■■■□□ 2.41
CCM2-218ENST00000541586 ATF7IP2Q5U623 682 aa30.09■■■□□ 2.41
CCM2-218ENST00000541586 NOTUMQ6P988 496 aa30.09■■■□□ 2.41
CCM2-218ENST00000541586 TMC2Q8TDI7 906 aa30.09■■■□□ 2.41
CCM2-218ENST00000541586 CCDC127Q96BQ5 260 aa30.09■■■□□ 2.41
CCM2-218ENST00000541586 TCHPQ9BT92 498 aa30.09■■■□□ 2.41
CCM2-218ENST00000541586 CEP72Q9P209 647 aa30.09■■■□□ 2.41
CCM2-218ENST00000541586 LDHAP00338 332 aaKnown RBP30.08■■■□□ 2.41
CCM2-218ENST00000541586 ACTN1P12814 892 aa30.08■■■□□ 2.41
CCM2-218ENST00000541586 AXLP30530 894 aa30.08■■■□□ 2.41
CCM2-218ENST00000541586 KCNJ6P48051 423 aa30.08■■■□□ 2.41
CCM2-218ENST00000541586 MYL7Q01449 175 aa30.08■■■□□ 2.41
CCM2-218ENST00000541586 CRELD2Q6UXH1 353 aaPredicted RBP30.08■■■□□ 2.41
CCM2-218ENST00000541586 FTHL17Q9BXU8 183 aa30.08■■■□□ 2.41
CCM2-218ENST00000541586 GANQ9H2C0 597 aa30.08■■■□□ 2.41
CCM2-218ENST00000541586 CNTNAP2Q9UHC6 1331 aa30.08■■■□□ 2.41
CCM2-218ENST00000541586 CEP290O15078 2479 aa30.08■■■□□ 2.41
CCM2-218ENST00000541586 ABLIM1O14639 778 aa30.08■■■□□ 2.41
CCM2-218ENST00000541586 ACOT2P49753 483 aa30.08■■■□□ 2.41
CCM2-218ENST00000541586 TSR1Q2NL82 804 aaKnown RBP30.08■■■□□ 2.41
CCM2-218ENST00000541586 RTN4RL1Q86UN2 441 aaPredicted RBP30.08■■■□□ 2.41
CCM2-218ENST00000541586 BAP1Q92560 729 aa30.08■■■□□ 2.41
CCM2-218ENST00000541586 BUD13Q9BRD0 619 aaKnown RBP eCLIP30.08■■■□□ 2.41
CCM2-218ENST00000541586 CHST12Q9NRB3 414 aa30.08■■■□□ 2.41
CCM2-218ENST00000541586 A0A1B0GUA9 196 aa30.07■■■□□ 2.4
CCM2-218ENST00000541586 LRRIQ3A6PVS8 624 aaPredicted RBP30.07■■■□□ 2.4
CCM2-218ENST00000541586 PROZP22891 400 aa30.07■■■□□ 2.4
CCM2-218ENST00000541586 GCLMP48507 274 aa30.07■■■□□ 2.4
CCM2-218ENST00000541586 POLR2FP61218 127 aaKnown RBP30.07■■■□□ 2.4
CCM2-218ENST00000541586 ENPEPQ07075 957 aa30.07■■■□□ 2.4
CCM2-218ENST00000541586 HSP90AA2PQ14568 343 aaPredicted RBP30.07■■■□□ 2.4
CCM2-218ENST00000541586 NOLC1Q14978 699 aaKnown RBP eCLIP30.07■■■□□ 2.4
CCM2-218ENST00000541586 TMEM240Q5SV17 173 aa30.07■■■□□ 2.4
CCM2-218ENST00000541586 ZBTB41Q5SVQ8 909 aa30.07■■■□□ 2.4
CCM2-218ENST00000541586 CACNA2D4Q7Z3S7 1137 aa30.07■■■□□ 2.4
CCM2-218ENST00000541586 PTPRHQ9HD43 1115 aa30.07■■■□□ 2.4
CCM2-218ENST00000541586 LTBP2Q14767 1821 aa30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms