RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 GAS2L1Q99501 681 aaPredicted RBP20.44■□□□□ 0.86
VPS33A-205ENST00000541169 NUP62CLQ9H1M0 184 aa20.44■□□□□ 0.86
VPS33A-205ENST00000541169 AGPAT3Q9NRZ7 376 aa20.44■□□□□ 0.86
VPS33A-205ENST00000541169 SPG21Q9NZD8 308 aa20.44■□□□□ 0.86
VPS33A-205ENST00000541169 KIAA1468Q9P260 1216 aa20.44■□□□□ 0.86
VPS33A-205ENST00000541169 PUF60Q9UHX1 559 aaKnown RBP20.44■□□□□ 0.86
VPS33A-205ENST00000541169 LAMA3Q16787 3333 aa20.43■□□□□ 0.86
VPS33A-205ENST00000541169 SMIM28A0A1B0GU29 152 aa20.43■□□□□ 0.86
VPS33A-205ENST00000541169 TTC26A0AVF1 554 aa20.43■□□□□ 0.86
VPS33A-205ENST00000541169 TGFB1I1O43294 461 aa20.43■□□□□ 0.86
VPS33A-205ENST00000541169 POMCP01189 267 aa20.43■□□□□ 0.86
VPS33A-205ENST00000541169 RPL13P26373 211 aaKnown RBP20.43■□□□□ 0.86
VPS33A-205ENST00000541169 SCNN1GP51170 649 aa20.43■□□□□ 0.86
VPS33A-205ENST00000541169 BCAR1P56945 870 aa20.43■□□□□ 0.86
VPS33A-205ENST00000541169 PLCB3Q01970 1234 aa20.43■□□□□ 0.86
VPS33A-205ENST00000541169 SURF1Q15526 300 aa20.43■□□□□ 0.86
VPS33A-205ENST00000541169 NFIL3Q16649 462 aa20.43■□□□□ 0.86
VPS33A-205ENST00000541169 SLC10A6Q3KNW5 377 aa20.43■□□□□ 0.86
VPS33A-205ENST00000541169 NELFCDQ8IXH7 590 aa20.43■□□□□ 0.86
VPS33A-205ENST00000541169 CEP120Q8N960 986 aa20.43■□□□□ 0.86
VPS33A-205ENST00000541169 C17orf80Q9BSJ5 609 aa20.43■□□□□ 0.86
VPS33A-205ENST00000541169 HAPLN2Q9GZV7 340 aa20.43■□□□□ 0.86
VPS33A-205ENST00000541169 NRDE2Q9H7Z3 1164 aa20.43■□□□□ 0.86
VPS33A-205ENST00000541169 KLK14Q9P0G3 267 aa20.43■□□□□ 0.86
VPS33A-205ENST00000541169 TRAF3IP3Q9Y228 551 aa20.43■□□□□ 0.86
VPS33A-205ENST00000541169 ZNF233A6NK53 670 aa20.42■□□□□ 0.86
VPS33A-205ENST00000541169 PSMA7O14818 248 aa20.42■□□□□ 0.86
VPS33A-205ENST00000541169 ZC3H11AO75152 810 aaKnown RBP eCLIP20.42■□□□□ 0.86
VPS33A-205ENST00000541169 POU3F3P20264 500 aaPredicted RBP20.42■□□□□ 0.86
VPS33A-205ENST00000541169 PAX3P23760 479 aa20.42■□□□□ 0.86
VPS33A-205ENST00000541169 MCM4P33991 863 aa20.42■□□□□ 0.86
VPS33A-205ENST00000541169 PDE12Q6L8Q7 609 aaKnown RBP20.42■□□□□ 0.86
VPS33A-205ENST00000541169 COLGALT2Q8IYK4 626 aa20.42■□□□□ 0.86
VPS33A-205ENST00000541169 XXYLT1Q8NBI6 393 aa20.42■□□□□ 0.86
VPS33A-205ENST00000541169 FBXL18Q96ME1 805 aa20.42■□□□□ 0.86
VPS33A-205ENST00000541169 PPP1R10Q96QC0 940 aaKnown RBP20.42■□□□□ 0.86
VPS33A-205ENST00000541169 COLEC11Q9BWP8 271 aa20.42■□□□□ 0.86
VPS33A-205ENST00000541169 KCTD10Q9H3F6 313 aa20.42■□□□□ 0.86
VPS33A-205ENST00000541169 FAN1Q9Y2M0 1017 aa20.42■□□□□ 0.86
VPS33A-205ENST00000541169 C2CD2Q9Y426 696 aa20.42■□□□□ 0.86
VPS33A-205ENST00000541169 PTGESO14684 152 aa20.41■□□□□ 0.86
VPS33A-205ENST00000541169 ARHGEF15O94989 841 aa20.41■□□□□ 0.86
VPS33A-205ENST00000541169 GALTP07902 379 aa20.41■□□□□ 0.86
VPS33A-205ENST00000541169 CXCL8P10145 99 aa20.41■□□□□ 0.86
VPS33A-205ENST00000541169 CYP3A5P20815 502 aa20.41■□□□□ 0.86
VPS33A-205ENST00000541169 RPL9P32969 192 aaKnown RBP20.41■□□□□ 0.86
VPS33A-205ENST00000541169 GPM6BQ13491 265 aa20.41■□□□□ 0.86
VPS33A-205ENST00000541169 ENOX2Q16206 610 aaKnown RBP20.41■□□□□ 0.86
VPS33A-205ENST00000541169 EDRF1Q3B7T1 1238 aa20.41■□□□□ 0.86
VPS33A-205ENST00000541169 FOXR2Q6PJQ5 311 aa20.41■□□□□ 0.86
VPS33A-205ENST00000541169 USP37Q86T82 979 aa20.41■□□□□ 0.86
VPS33A-205ENST00000541169 TMEM169Q96HH4 297 aa20.41■□□□□ 0.86
VPS33A-205ENST00000541169 DHTKD1Q96HY7 919 aaPredicted RBP20.41■□□□□ 0.86
VPS33A-205ENST00000541169 CBWD1Q9BRT8 395 aa20.41■□□□□ 0.86
VPS33A-205ENST00000541169 FAM213AQ9BRX8 229 aa20.41■□□□□ 0.86
VPS33A-205ENST00000541169 MTMR10Q9NXD2 777 aa20.41■□□□□ 0.86
VPS33A-205ENST00000541169 HSPBP1Q9NZL4 362 aa20.41■□□□□ 0.86
VPS33A-205ENST00000541169 PLAGL2Q9UPG8 496 aa20.41■□□□□ 0.86
VPS33A-205ENST00000541169 KIAA1671Q9BY89 1806 aa20.41■□□□□ 0.86
VPS33A-205ENST00000541169 RBAK-RBAKDNI3L0D1 243 aa20.4■□□□□ 0.86
VPS33A-205ENST00000541169 FGF18O76093 207 aa20.4■□□□□ 0.86
VPS33A-205ENST00000541169 DDHD2O94830 711 aa20.4■□□□□ 0.86
VPS33A-205ENST00000541169 LAMA2P24043 3122 aaKnown RBP20.4■□□□□ 0.86
VPS33A-205ENST00000541169 ACOT2P49753 483 aa20.4■□□□□ 0.86
VPS33A-205ENST00000541169 MORC3Q14149 939 aa20.4■□□□□ 0.86
VPS33A-205ENST00000541169 GRIN2CQ14957 1233 aa20.4■□□□□ 0.86
VPS33A-205ENST00000541169 CAMK4Q16566 473 aa20.4■□□□□ 0.86
VPS33A-205ENST00000541169 ZNF280BQ86YH2 543 aa20.4■□□□□ 0.86
VPS33A-205ENST00000541169 SLC39A11Q8N1S5 342 aa20.4■□□□□ 0.86
VPS33A-205ENST00000541169 KLHL23Q8NBE8 558 aa20.4■□□□□ 0.86
VPS33A-205ENST00000541169 TSG101Q99816 390 aa20.4■□□□□ 0.86
VPS33A-205ENST00000541169 MIOSQ9NXC5 875 aa20.4■□□□□ 0.86
VPS33A-205ENST00000541169 RBAKQ9NYW8 714 aaPredicted RBP20.4■□□□□ 0.86
VPS33A-205ENST00000541169 MAN1B1Q9UKM7 699 aa20.4■□□□□ 0.86
VPS33A-205ENST00000541169 MTUS1Q9ULD2 1270 aa20.4■□□□□ 0.86
VPS33A-205ENST00000541169 UBQLN1Q9UMX0 589 aaKnown RBP20.4■□□□□ 0.86
VPS33A-205ENST00000541169 TISP43B9A030 160 aa20.39■□□□□ 0.85
VPS33A-205ENST00000541169 MAPK13O15264 365 aa20.39■□□□□ 0.85
VPS33A-205ENST00000541169 TNFSF9P41273 254 aa20.39■□□□□ 0.85
VPS33A-205ENST00000541169 AFF1P51825 1210 aaKnown RBP20.39■□□□□ 0.85
VPS33A-205ENST00000541169 LRRC63Q05C16 580 aa20.39■□□□□ 0.85
VPS33A-205ENST00000541169 CRELD2Q6UXH1 353 aaPredicted RBP20.39■□□□□ 0.85
VPS33A-205ENST00000541169 BRSK2Q8IWQ3 736 aa20.39■□□□□ 0.85
VPS33A-205ENST00000541169 ADSSL1Q8N142 457 aa20.39■□□□□ 0.85
VPS33A-205ENST00000541169 CACTINQ8WUQ7 758 aaKnown RBP20.39■□□□□ 0.85
VPS33A-205ENST00000541169 SYAP1Q96A49 352 aaPredicted RBP20.39■□□□□ 0.85
VPS33A-205ENST00000541169 IGSF21Q96ID5 467 aa20.39■□□□□ 0.85
VPS33A-205ENST00000541169 PRDM12Q9H4Q4 367 aa20.39■□□□□ 0.85
VPS33A-205ENST00000541169 FRMD4BQ9Y2L6 1034 aa20.39■□□□□ 0.85
VPS33A-205ENST00000541169 BICDL2A1A5D9 508 aa20.38■□□□□ 0.85
VPS33A-205ENST00000541169 LACTBL1A8MY62 500 aa20.38■□□□□ 0.85
VPS33A-205ENST00000541169 TMEM189-UBE2V1I3L0A0 370 aa20.38■□□□□ 0.85
VPS33A-205ENST00000541169 NRP1O14786 923 aa20.38■□□□□ 0.85
VPS33A-205ENST00000541169 EXOC3O60645 756 aa20.38■□□□□ 0.85
VPS33A-205ENST00000541169 PRCPP42785 496 aa20.38■□□□□ 0.85
VPS33A-205ENST00000541169 OR1G1P47890 313 aa20.38■□□□□ 0.85
VPS33A-205ENST00000541169 SLC11A1P49279 550 aa20.38■□□□□ 0.85
VPS33A-205ENST00000541169 ENPEPQ07075 957 aa20.38■□□□□ 0.85
VPS33A-205ENST00000541169 ELAVL2Q12926 359 aaKnown RBP20.38■□□□□ 0.85
VPS33A-205ENST00000541169 NAB2Q15742 525 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms