RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 MRPS5P82675 430 aaKnown RBP10.08□□□□□ -0.8
SNHG1-215ENST00000540904 KCNA1Q09470 495 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 TUSC3Q13454 348 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 SMC1AQ14683 1233 aaKnown RBP10.08□□□□□ -0.8
SNHG1-215ENST00000540904 BMS1Q14692 1282 aaKnown RBP10.08□□□□□ -0.8
SNHG1-215ENST00000540904 L1TD1Q5T7N2 865 aaKnown RBP10.08□□□□□ -0.8
SNHG1-215ENST00000540904 CNNM4Q6P4Q7 775 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 SLC39A4Q6P5W5 647 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 FSIP1Q8NA03 581 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 ATXN2LQ8WWM7 1075 aaKnown RBP10.08□□□□□ -0.8
SNHG1-215ENST00000540904 AUTS2Q8WXX7 1259 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 HVCN1Q96D96 273 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 SNX27Q96L92 541 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 PPP1R10Q96QC0 940 aaKnown RBP10.08□□□□□ -0.8
SNHG1-215ENST00000540904 ACCSQ96QU6 501 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 PAAF1Q9BRP4 392 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 MSTO1Q9BUK6 570 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 COLEC11Q9BWP8 271 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 STRA6Q9BX79 667 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 VN1R3Q9BXE9 311 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 FGFBP2Q9BYJ0 223 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 IKZF4Q9H2S9 585 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 TLE6Q9H808 572 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 UBE2ZQ9H832 354 aaPredicted RBP10.08□□□□□ -0.8
SNHG1-215ENST00000540904 MARCH5Q9NX47 278 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 CLDND1Q9NY35 253 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 EXOC7Q9UPT5 735 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 HPSEQ9Y251 543 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 PCDHB13Q9Y5F0 798 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 KIAA1671Q9BY89 1806 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 TRANK1O15050 2925 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 PRUNE2Q8WUY3 3088 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.07□□□□□ -0.8
SNHG1-215ENST00000540904 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.07□□□□□ -0.8
SNHG1-215ENST00000540904 A0A1W2PQ27 194 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 A0A1W2PQ64 194 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 A0A1W2PQD8 194 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 GOLGA6L4A6NEF3 574 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 C2orf71A6NGG8 1288 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 H3BQ06 376 aaPredicted RBP10.07□□□□□ -0.8
SNHG1-215ENST00000540904 OGTO15294 1046 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 LINC01565O15544 149 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 GALR2O43603 387 aaPredicted RBP10.07□□□□□ -0.8
SNHG1-215ENST00000540904 NCK2O43639 380 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 TADA2AO75478 443 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 CLTAP09496 248 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 CXCL8P10145 99 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 CTSAP10619 480 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 TNFSF9P41273 254 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 NDUFV1P49821 464 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 CUL4BQ13620 913 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 ALCAMQ13740 583 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 HSP90AA2PQ14568 343 aaPredicted RBP10.07□□□□□ -0.8
SNHG1-215ENST00000540904 NAB2Q15742 525 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 KYAT1Q16773 422 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 AAK1Q2M2I8 961 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 SLC10A6Q3KNW5 377 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 ZBTB41Q5SVQ8 909 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 SLFN12LQ6IEE8 588 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 ALKAL1Q6UXT8 129 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 STXBP4Q6ZWJ1 553 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 SYCP3Q8IZU3 236 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 MRPL43Q8N983 215 aaKnown RBP10.07□□□□□ -0.8
SNHG1-215ENST00000540904 TMEM87AQ8NBN3 555 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 GLIS3Q8NEA6 775 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 HASPINQ8TF76 798 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 PABPC5Q96DU9 382 aaKnown RBP10.07□□□□□ -0.8
SNHG1-215ENST00000540904 PAGE5Q96GU1 130 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 ZMAT2Q96NC0 199 aaKnown RBP10.07□□□□□ -0.8
SNHG1-215ENST00000540904 ASB2Q96Q27 587 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 ZBP1Q9H171 429 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 GOLPH3LQ9H4A5 285 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 GOLGA2P5Q9HBQ8 144 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 STK39Q9UEW8 545 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 USP25Q9UHP3 1055 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 ADAM28Q9UKQ2 775 aa10.07□□□□□ -0.8
SNHG1-215ENST00000540904 CIZ1Q9ULV3 898 aaPredicted RBP10.07□□□□□ -0.8
SNHG1-215ENST00000540904 FAM237AA0A1B0GTK4 181 aa10.06□□□□□ -0.8
SNHG1-215ENST00000540904 TULP1O00294 542 aaPredicted RBP10.06□□□□□ -0.8
SNHG1-215ENST00000540904 C2CD2LO14523 706 aa10.06□□□□□ -0.8
SNHG1-215ENST00000540904 MEFVO15553 781 aaPredicted RBP10.06□□□□□ -0.8
SNHG1-215ENST00000540904 FAM189A1O60320 539 aa10.06□□□□□ -0.8
SNHG1-215ENST00000540904 B3GAT3O94766 335 aa10.06□□□□□ -0.8
SNHG1-215ENST00000540904 PRPF6O94906 941 aaKnown RBP10.06□□□□□ -0.8
SNHG1-215ENST00000540904 KIF4AO95239 1232 aa10.06□□□□□ -0.8
SNHG1-215ENST00000540904 KCNE1P15382 129 aa10.06□□□□□ -0.8
SNHG1-215ENST00000540904 ACOT2P49753 483 aa10.06□□□□□ -0.8
SNHG1-215ENST00000540904 KCNQ1P51787 676 aa10.06□□□□□ -0.8
SNHG1-215ENST00000540904 RBM10P98175 930 aaKnown RBP10.06□□□□□ -0.8
SNHG1-215ENST00000540904 SPAG1Q07617 926 aa10.06□□□□□ -0.8
SNHG1-215ENST00000540904 DLX2Q07687 328 aaPredicted RBP10.06□□□□□ -0.8
SNHG1-215ENST00000540904 COL19A1Q14993 1142 aa10.06□□□□□ -0.8
SNHG1-215ENST00000540904 ENOX2Q16206 610 aaKnown RBP10.06□□□□□ -0.8
SNHG1-215ENST00000540904 DUSP6Q16828 381 aa10.06□□□□□ -0.8
SNHG1-215ENST00000540904 CTC1Q2NKJ3 1217 aa10.06□□□□□ -0.8
SNHG1-215ENST00000540904 XKR4Q5GH76 650 aa10.06□□□□□ -0.8
SNHG1-215ENST00000540904 FAM26FQ5R3K3 315 aa10.06□□□□□ -0.8
SNHG1-215ENST00000540904 KIAA1841Q6NSI8 718 aa10.06□□□□□ -0.8
SNHG1-215ENST00000540904 UNC13DQ70J99 1090 aa10.06□□□□□ -0.8
SNHG1-215ENST00000540904 TAS1R1Q7RTX1 841 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms