RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 AGPAT3Q9NRZ7 376 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 IFNKQ9P0W0 207 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 CGNQ9P2M7 1197 aaKnown RBP7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 ARHGAP28Q9P2N2 729 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 GTF2IRD1Q9UHL9 959 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 TRAF3IP3Q9Y228 551 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 FRMD4BQ9Y2L6 1034 aa7.26□□□□□ -1.25
CLTCL1-206ENST00000540896 A0A087WZ62 844 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 A0A1W2PQ45 241 aaPredicted RBP7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 A0A1W2PQY0 241 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 MBLAC1A4D2B0 266 aaPredicted RBP7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 ANKRD63C9JTQ0 380 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 N4BP3O15049 544 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 TGFB1I1O43294 461 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 EXOC3O60645 756 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 PRKCBP05771 671 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 EPB41P11171 864 aaKnown RBP7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 DEKP35659 375 aaKnown RBP7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 RNF144AP50876 292 aaPredicted RBP7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 GPC3P51654 580 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 ZNF75DP51815 510 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 PTENP60484 403 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 PTPN11Q06124 597 aaPredicted RBP7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 POU5F1BQ06416 359 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 PRPF4BQ13523 1007 aaKnown RBP7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 PTGISQ16647 500 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 KIZQ2M2Z5 673 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 ZCWPW2Q504Y3 356 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 CDKAL1Q5VV42 579 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 SLFN12LQ6IEE8 588 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 FOXR1Q6PIV2 292 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 FOXR2Q6PJQ5 311 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 RUFY4Q6ZNE9 571 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 SRGAP1Q7Z6B7 1085 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 FILIP1Q7Z7B0 1213 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 UBE2Q1Q7Z7E8 422 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 ZNF410Q86VK4 478 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 MAP4K3Q8IVH8 894 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 NME8Q8N427 588 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 SVOPQ8N4V2 548 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 POMGNT1Q8WZA1 660 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 CNOT6LQ96LI5 555 aaKnown RBP7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 CEP63Q96MT8 703 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 FDXACB1Q9BRP7 624 aaPredicted RBP7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 MRPL4Q9BYD3 311 aaKnown RBP7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 GCOM2Q9BZD3 368 aaPredicted RBP7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 VPS16Q9H269 839 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 IKZF4Q9H2S9 585 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 PCIF1Q9H4Z3 704 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 ADGRA3Q8IWK6 1321 aa7.25□□□□□ -1.25
CLTCL1-206ENST00000540896 A0A0U1RQG5 324 aaPredicted RBP7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 GOLGA8IPA6NC78 632 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 GOLGA8JA6NMD2 632 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 TISP43B9A030 160 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 ACKR2O00590 384 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 CLDN3O15551 220 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 CSDE1O75534 798 aaKnown RBP7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 ERLIN2O94905 339 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 RPLP2P05387 115 aaKnown RBP7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 KRT13P13646 458 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 ZNF18P17022 549 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 GPC1P35052 558 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 PSMC2P35998 433 aaKnown RBP7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 THPOP40225 353 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 COPB1P53618 953 aaKnown RBP7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 ADAM17P78536 824 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 MYBPC2Q14324 1141 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 HSP90AA2PQ14568 343 aaPredicted RBP7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 KRT31Q15323 416 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 TCERG1LQ5VWI1 586 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 CDCA2Q69YH5 1023 aaPredicted RBP7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 GDF6Q6KF10 455 aaPredicted RBP7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 SARM1Q6SZW1 724 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 SLC39A5Q6ZMH5 540 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 LRRC55Q6ZSA7 311 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 TAS1R3Q7RTX0 852 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 CATSPER4Q7RTX7 472 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 SESTD1Q86VW0 696 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 FAM186BQ8IYM0 893 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 LINC01465Q8N7H1 131 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 XXYLT1Q8NBI6 393 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 CBWD1Q9BRT8 395 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 TUBGCP2Q9BSJ2 902 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 NOC4LQ9BVI4 516 aaKnown RBP7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 TARS2Q9BW92 718 aaKnown RBP7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 NFKBIZQ9BYH8 718 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 XPO4Q9C0E2 1151 aaKnown RBP7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 HSD3B7Q9H2F3 369 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 IFT122Q9HBG6 1241 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 METTL14Q9HCE5 456 aaKnown RBP7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 PRMT7Q9NVM4 692 aaPredicted RBP7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 TAB2Q9NYJ8 693 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 HSPBP1Q9NZL4 362 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 ANKFY1Q9P2R3 1169 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 ARMCX3Q9UH62 379 aaPredicted RBP7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 LIMA1Q9UHB6 759 aaKnown RBP7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 USP20Q9Y2K6 914 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 MYH9P35579 1960 aaKnown RBP7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 GRIN2DO15399 1336 aa7.24□□□□□ -1.25
CLTCL1-206ENST00000540896 LOXHD1Q8IVV2 1947 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms