RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 MBTPS1Q14703 1052 aa13.53□□□□□ -0.24
SMAD3-204ENST00000540846 MAPK6Q16659 721 aa13.53□□□□□ -0.24
SMAD3-204ENST00000540846 LRRC26Q2I0M4 334 aa13.53□□□□□ -0.24
SMAD3-204ENST00000540846 ASTE1Q2TB18 679 aaPredicted RBP13.53□□□□□ -0.24
SMAD3-204ENST00000540846 ZNF618Q5T7W0 954 aa13.53□□□□□ -0.24
SMAD3-204ENST00000540846 COL13A1Q5TAT6 717 aaPredicted RBP13.53□□□□□ -0.24
SMAD3-204ENST00000540846 ZPBP2Q6X784 338 aa13.53□□□□□ -0.24
SMAD3-204ENST00000540846 CCDC42Q96M95 316 aa13.53□□□□□ -0.24
SMAD3-204ENST00000540846 TOX2Q96NM4 488 aa13.53□□□□□ -0.24
SMAD3-204ENST00000540846 TARS2Q9BW92 718 aaKnown RBP13.53□□□□□ -0.24
SMAD3-204ENST00000540846 INO80BQ9C086 356 aaPredicted RBP13.53□□□□□ -0.24
SMAD3-204ENST00000540846 PCIF1Q9H4Z3 704 aa13.53□□□□□ -0.24
SMAD3-204ENST00000540846 HAUS4Q9H6D7 363 aa13.53□□□□□ -0.24
SMAD3-204ENST00000540846 PTPRHQ9HD43 1115 aa13.53□□□□□ -0.24
SMAD3-204ENST00000540846 TET1Q8NFU7 2136 aa13.52□□□□□ -0.24
SMAD3-204ENST00000540846 HNRNPDLO14979 420 aaKnown RBP13.52□□□□□ -0.25
SMAD3-204ENST00000540846 P4HA2O15460 535 aa13.52□□□□□ -0.25
SMAD3-204ENST00000540846 CTIFO43310 598 aaKnown RBP13.52□□□□□ -0.25
SMAD3-204ENST00000540846 TSPAN1O60635 241 aa13.52□□□□□ -0.25
SMAD3-204ENST00000540846 PQBP1O60828 265 aaKnown RBP13.52□□□□□ -0.25
SMAD3-204ENST00000540846 N4BP1O75113 896 aaKnown RBP13.52□□□□□ -0.25
SMAD3-204ENST00000540846 TRIM49P0CI25 452 aa13.52□□□□□ -0.25
SMAD3-204ENST00000540846 TRIM49CP0CI26 452 aa13.52□□□□□ -0.25
SMAD3-204ENST00000540846 FGFR4P22455 802 aa13.52□□□□□ -0.25
SMAD3-204ENST00000540846 HOXA11P31270 313 aaPredicted RBP13.52□□□□□ -0.25
SMAD3-204ENST00000540846 THPOP40225 353 aa13.52□□□□□ -0.25
SMAD3-204ENST00000540846 VAMP7P51809 220 aa13.52□□□□□ -0.25
SMAD3-204ENST00000540846 MYL7Q01449 175 aa13.52□□□□□ -0.25
SMAD3-204ENST00000540846 TLE2Q04725 743 aa13.52□□□□□ -0.25
SMAD3-204ENST00000540846 RAPGEF1Q13905 1077 aa13.52□□□□□ -0.25
SMAD3-204ENST00000540846 CBWD6Q4V339 395 aa13.52□□□□□ -0.25
SMAD3-204ENST00000540846 CBWD3Q5JTY5 395 aa13.52□□□□□ -0.25
SMAD3-204ENST00000540846 CBWD5Q5RIA9 395 aa13.52□□□□□ -0.25
SMAD3-204ENST00000540846 RSPH3Q86UC2 560 aa13.52□□□□□ -0.25
SMAD3-204ENST00000540846 FBXL18Q96ME1 805 aa13.52□□□□□ -0.25
SMAD3-204ENST00000540846 ACO2Q99798 780 aaKnown RBP13.52□□□□□ -0.25
SMAD3-204ENST00000540846 GCOM2Q9BZD3 368 aaPredicted RBP13.52□□□□□ -0.25
SMAD3-204ENST00000540846 PRMT7Q9NVM4 692 aaPredicted RBP13.52□□□□□ -0.25
SMAD3-204ENST00000540846 NOD1Q9Y239 953 aa13.52□□□□□ -0.25
SMAD3-204ENST00000540846 GINS2Q9Y248 185 aa13.52□□□□□ -0.25
SMAD3-204ENST00000540846 FHOD1Q9Y613 1164 aa13.52□□□□□ -0.25
SMAD3-204ENST00000540846 ZNF263O14978 683 aa13.51□□□□□ -0.25
SMAD3-204ENST00000540846 PMM2O15305 246 aa13.51□□□□□ -0.25
SMAD3-204ENST00000540846 FAM189A1O60320 539 aa13.51□□□□□ -0.25
SMAD3-204ENST00000540846 ADRB2P07550 413 aa13.51□□□□□ -0.25
SMAD3-204ENST00000540846 ARF4P18085 180 aaPredicted RBP13.51□□□□□ -0.25
SMAD3-204ENST00000540846 GARTP22102 1010 aa13.51□□□□□ -0.25
SMAD3-204ENST00000540846 CASQ1P31415 396 aa13.51□□□□□ -0.25
SMAD3-204ENST00000540846 VAV2P52735 878 aa13.51□□□□□ -0.25
SMAD3-204ENST00000540846 JAM2P57087 298 aa13.51□□□□□ -0.25
SMAD3-204ENST00000540846 ENPEPQ07075 957 aa13.51□□□□□ -0.25
SMAD3-204ENST00000540846 STRN3Q13033 797 aa13.51□□□□□ -0.25
SMAD3-204ENST00000540846 GPNMBQ14956 572 aa13.51□□□□□ -0.25
SMAD3-204ENST00000540846 FBXO47Q5MNV8 452 aa13.51□□□□□ -0.25
SMAD3-204ENST00000540846 C1orf220Q5T0J3 134 aa13.51□□□□□ -0.25
SMAD3-204ENST00000540846 EEF1DP3Q658K8 133 aa13.51□□□□□ -0.25
SMAD3-204ENST00000540846 TSHZ1Q6ZSZ6 1077 aa13.51□□□□□ -0.25
SMAD3-204ENST00000540846 NECAB2Q7Z6G3 386 aa13.51□□□□□ -0.25
SMAD3-204ENST00000540846 KIAA1328Q86T90 577 aa13.51□□□□□ -0.25
SMAD3-204ENST00000540846 FAM228AQ86W67 206 aa13.51□□□□□ -0.25
SMAD3-204ENST00000540846 ZSWIM2Q8NEG5 633 aa13.51□□□□□ -0.25
SMAD3-204ENST00000540846 CAGE1Q8TC20 777 aa13.51□□□□□ -0.25
SMAD3-204ENST00000540846 ZBTB45Q96K62 511 aaPredicted RBP13.51□□□□□ -0.25
SMAD3-204ENST00000540846 SCLT1Q96NL6 688 aa13.51□□□□□ -0.25
SMAD3-204ENST00000540846 MRPL4Q9BYD3 311 aaKnown RBP13.51□□□□□ -0.25
SMAD3-204ENST00000540846 IRX2Q9BZI1 471 aaPredicted RBP13.51□□□□□ -0.25
SMAD3-204ENST00000540846 TBX21Q9UL17 535 aa13.51□□□□□ -0.25
SMAD3-204ENST00000540846 NOC2LQ9Y3T9 749 aaKnown RBP13.51□□□□□ -0.25
SMAD3-204ENST00000540846 RALGAPA2Q2PPJ7 1873 aa13.51□□□□□ -0.25
SMAD3-204ENST00000540846 UMODL1Q5DID0 1318 aa13.51□□□□□ -0.25
SMAD3-204ENST00000540846 A0A0B4J269 797 aa13.5□□□□□ -0.25
SMAD3-204ENST00000540846 PITPNM1O00562 1244 aa13.5□□□□□ -0.25
SMAD3-204ENST00000540846 TOM1L1O75674 476 aa13.5□□□□□ -0.25
SMAD3-204ENST00000540846 RFX1P22670 979 aa13.5□□□□□ -0.25
SMAD3-204ENST00000540846 PRPF4BQ13523 1007 aaKnown RBP13.5□□□□□ -0.25
SMAD3-204ENST00000540846 LPIN1Q14693 890 aa13.5□□□□□ -0.25
SMAD3-204ENST00000540846 PCBP1Q15365 356 aaKnown RBP eCLIP13.5□□□□□ -0.25
SMAD3-204ENST00000540846 SPA17Q15506 151 aa13.5□□□□□ -0.25
SMAD3-204ENST00000540846 ASIC2Q16515 512 aa13.5□□□□□ -0.25
SMAD3-204ENST00000540846 SNRNP35Q16560 246 aaKnown RBP13.5□□□□□ -0.25
SMAD3-204ENST00000540846 JAKMIP2Q96AA8 810 aa13.5□□□□□ -0.25
SMAD3-204ENST00000540846 SPAG5Q96R06 1193 aa13.5□□□□□ -0.25
SMAD3-204ENST00000540846 INTS2Q9H0H0 1204 aaKnown RBP13.5□□□□□ -0.25
SMAD3-204ENST00000540846 DEF6Q9H4E7 631 aa13.5□□□□□ -0.25
SMAD3-204ENST00000540846 PDZD7Q9H5P4 517 aa13.5□□□□□ -0.25
SMAD3-204ENST00000540846 AGO3Q9H9G7 860 aaKnown RBP13.5□□□□□ -0.25
SMAD3-204ENST00000540846 AJAP1Q9UKB5 411 aaPredicted RBP13.5□□□□□ -0.25
SMAD3-204ENST00000540846 TNFSF13BQ9Y275 285 aa13.5□□□□□ -0.25
SMAD3-204ENST00000540846 LTBP2Q14767 1821 aa13.5□□□□□ -0.25
SMAD3-204ENST00000540846 AKR1B10O60218 316 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 ABL1P00519 1130 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 PRKCIP41743 596 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 LIG4P49917 911 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 DLG4P78352 724 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 CYP27A1Q02318 531 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 MCL1Q07820 350 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 PPP3CAQ08209 521 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 TDRD12Q587J7 1177 aaKnown RBP13.49□□□□□ -0.25
SMAD3-204ENST00000540846 ZNF569Q5MCW4 686 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 ATF7IP2Q5U623 682 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms