RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 MRPL38Q96DV4 380 aaKnown RBP24.09■■□□□ 1.45
TRIM65-202ENST00000540128 SNX27Q96L92 541 aa24.09■■□□□ 1.45
TRIM65-202ENST00000540128 ALG13Q9NP73 1137 aaKnown RBP24.09■■□□□ 1.45
TRIM65-202ENST00000540128 CPSF3Q9UKF6 684 aaKnown RBP24.09■■□□□ 1.45
TRIM65-202ENST00000540128 SMIM28A0A1B0GU29 152 aa24.08■■□□□ 1.45
TRIM65-202ENST00000540128 SNRPFP62306 86 aaKnown RBP24.08■■□□□ 1.45
TRIM65-202ENST00000540128 CAMK1Q14012 370 aa24.08■■□□□ 1.45
TRIM65-202ENST00000540128 PTPROQ16827 1216 aa24.08■■□□□ 1.45
TRIM65-202ENST00000540128 KIAA0895Q8NCT3 520 aa24.08■■□□□ 1.45
TRIM65-202ENST00000540128 SPATA20Q8TB22 786 aa24.08■■□□□ 1.45
TRIM65-202ENST00000540128 CCDC47Q96A33 483 aaKnown RBP24.08■■□□□ 1.45
TRIM65-202ENST00000540128 PPP1R10Q96QC0 940 aaKnown RBP24.08■■□□□ 1.45
TRIM65-202ENST00000540128 CNTN3Q9P232 1028 aa24.08■■□□□ 1.45
TRIM65-202ENST00000540128 AGO2Q9UKV8 859 aaKnown RBP24.08■■□□□ 1.45
TRIM65-202ENST00000540128 TTC26A0AVF1 554 aa24.07■■□□□ 1.44
TRIM65-202ENST00000540128 IGFBP4P22692 258 aa24.07■■□□□ 1.44
TRIM65-202ENST00000540128 PBX3P40426 434 aa24.07■■□□□ 1.44
TRIM65-202ENST00000540128 TUSC3Q13454 348 aa24.07■■□□□ 1.44
TRIM65-202ENST00000540128 SEZ6Q53EL9 994 aa24.07■■□□□ 1.44
TRIM65-202ENST00000540128 ZBTB41Q5SVQ8 909 aa24.07■■□□□ 1.44
TRIM65-202ENST00000540128 POMGNT1Q8WZA1 660 aa24.07■■□□□ 1.44
TRIM65-202ENST00000540128 IGSF21Q96ID5 467 aa24.07■■□□□ 1.44
TRIM65-202ENST00000540128 TSPAN18Q96SJ8 248 aa24.07■■□□□ 1.44
TRIM65-202ENST00000540128 GBP3Q9H0R5 595 aa24.07■■□□□ 1.44
TRIM65-202ENST00000540128 HOOK1Q9UJC3 728 aaKnown RBP24.07■■□□□ 1.44
TRIM65-202ENST00000540128 FAN1Q9Y2M0 1017 aa24.07■■□□□ 1.44
TRIM65-202ENST00000540128 NRP1O14786 923 aa24.06■■□□□ 1.44
TRIM65-202ENST00000540128 KIAA0391O15091 583 aaKnown RBP24.06■■□□□ 1.44
TRIM65-202ENST00000540128 TGFB1I1O43294 461 aa24.06■■□□□ 1.44
TRIM65-202ENST00000540128 KINO60870 393 aaKnown RBP24.06■■□□□ 1.44
TRIM65-202ENST00000540128 DNAJB1P25685 340 aa24.06■■□□□ 1.44
TRIM65-202ENST00000540128 TNFSF9P41273 254 aa24.06■■□□□ 1.44
TRIM65-202ENST00000540128 KRT17Q04695 432 aa24.06■■□□□ 1.44
TRIM65-202ENST00000540128 PNOCQ13519 176 aa24.06■■□□□ 1.44
TRIM65-202ENST00000540128 KNOP1Q1ED39 458 aaKnown RBP24.06■■□□□ 1.44
TRIM65-202ENST00000540128 POF1BQ8WVV4 589 aa24.06■■□□□ 1.44
TRIM65-202ENST00000540128 ZMAT2Q96NC0 199 aaKnown RBP24.06■■□□□ 1.44
TRIM65-202ENST00000540128 GSDMAQ96QA5 445 aa24.06■■□□□ 1.44
TRIM65-202ENST00000540128 TRANK1O15050 2925 aa24.06■■□□□ 1.44
TRIM65-202ENST00000540128 NT5C1B-RDH14C9J2C7 533 aa24.05■■□□□ 1.44
TRIM65-202ENST00000540128 CXCL8P10145 99 aa24.05■■□□□ 1.44
TRIM65-202ENST00000540128 ENOX2Q16206 610 aaKnown RBP24.05■■□□□ 1.44
TRIM65-202ENST00000540128 CRELD2Q6UXH1 353 aaPredicted RBP24.05■■□□□ 1.44
TRIM65-202ENST00000540128 TMEM173Q86WV6 379 aaPredicted RBP24.05■■□□□ 1.44
TRIM65-202ENST00000540128 CD302Q8IX05 232 aa24.05■■□□□ 1.44
TRIM65-202ENST00000540128 GBP4Q96PP9 640 aa24.05■■□□□ 1.44
TRIM65-202ENST00000540128 CBWD1Q9BRT8 395 aa24.05■■□□□ 1.44
TRIM65-202ENST00000540128 RPF1Q9H9Y2 349 aaKnown RBP24.05■■□□□ 1.44
TRIM65-202ENST00000540128 SLC38A7Q9NVC3 462 aa24.05■■□□□ 1.44
TRIM65-202ENST00000540128 CGNQ9P2M7 1197 aaKnown RBP24.05■■□□□ 1.44
TRIM65-202ENST00000540128 PUF60Q9UHX1 559 aaKnown RBP24.05■■□□□ 1.44
TRIM65-202ENST00000540128 PCDHA5Q9Y5H7 936 aa24.05■■□□□ 1.44
TRIM65-202ENST00000540128 TRIP11Q15643 1979 aa24.05■■□□□ 1.44
TRIM65-202ENST00000540128 SMC2O95347 1197 aa24.04■■□□□ 1.44
TRIM65-202ENST00000540128 EFEMP2O95967 443 aa24.04■■□□□ 1.44
TRIM65-202ENST00000540128 LDHAP00338 332 aaKnown RBP24.04■■□□□ 1.44
TRIM65-202ENST00000540128 ZBTB6Q15916 424 aa24.04■■□□□ 1.44
TRIM65-202ENST00000540128 DDX53Q86TM3 631 aaKnown RBP24.04■■□□□ 1.44
TRIM65-202ENST00000540128 BCL7CQ8WUZ0 217 aaPredicted RBP24.04■■□□□ 1.44
TRIM65-202ENST00000540128 TMEM169Q96HH4 297 aa24.04■■□□□ 1.44
TRIM65-202ENST00000540128 COLEC11Q9BWP8 271 aa24.04■■□□□ 1.44
TRIM65-202ENST00000540128 STK39Q9UEW8 545 aa24.04■■□□□ 1.44
TRIM65-202ENST00000540128 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.04■■□□□ 1.44
TRIM65-202ENST00000540128 CITO14578 2027 aa24.04■■□□□ 1.44
TRIM65-202ENST00000540128 TDRD15B5MCY1 1934 aaKnown RBP24.04■■□□□ 1.44
TRIM65-202ENST00000540128 COL4A4P53420 1690 aaPredicted RBP24.03■■□□□ 1.44
TRIM65-202ENST00000540128 FSCN2O14926 492 aa24.03■■□□□ 1.44
TRIM65-202ENST00000540128 OR1G1P47890 313 aa24.03■■□□□ 1.44
TRIM65-202ENST00000540128 ACOT2P49753 483 aa24.03■■□□□ 1.44
TRIM65-202ENST00000540128 GLRA4Q5JXX5 417 aa24.03■■□□□ 1.44
TRIM65-202ENST00000540128 PDE12Q6L8Q7 609 aaKnown RBP24.03■■□□□ 1.44
TRIM65-202ENST00000540128 NELFCDQ8IXH7 590 aa24.03■■□□□ 1.44
TRIM65-202ENST00000540128 C12orf56Q8IXR9 622 aa24.03■■□□□ 1.44
TRIM65-202ENST00000540128 TMEM174Q8WUU8 243 aa24.03■■□□□ 1.44
TRIM65-202ENST00000540128 AGPAT3Q9NRZ7 376 aa24.03■■□□□ 1.44
TRIM65-202ENST00000540128 LMBRD1Q9NUN5 540 aa24.03■■□□□ 1.44
TRIM65-202ENST00000540128 RMND1Q9NWS8 449 aa24.03■■□□□ 1.44
TRIM65-202ENST00000540128 MARCH5Q9NX47 278 aa24.03■■□□□ 1.44
TRIM65-202ENST00000540128 LACTBL1A8MY62 500 aa24.02■■□□□ 1.44
TRIM65-202ENST00000540128 EXTL3O43909 919 aa24.02■■□□□ 1.44
TRIM65-202ENST00000540128 ARMCX5Q6P1M9 558 aa24.02■■□□□ 1.44
TRIM65-202ENST00000540128 GOLGA5Q8TBA6 731 aa24.02■■□□□ 1.44
TRIM65-202ENST00000540128 FBXL18Q96ME1 805 aa24.02■■□□□ 1.44
TRIM65-202ENST00000540128 UROC1Q96N76 676 aa24.02■■□□□ 1.44
TRIM65-202ENST00000540128 GTPBP4Q9BZE4 634 aaKnown RBP24.02■■□□□ 1.44
TRIM65-202ENST00000540128 KCTD10Q9H3F6 313 aa24.02■■□□□ 1.44
TRIM65-202ENST00000540128 ASB7Q9H672 318 aa24.02■■□□□ 1.44
TRIM65-202ENST00000540128 TLR9Q9NR96 1032 aa24.02■■□□□ 1.44
TRIM65-202ENST00000540128 PRG3Q9Y2Y8 225 aaPredicted RBP24.02■■□□□ 1.44
TRIM65-202ENST00000540128 KIF20AO95235 890 aa24.01■■□□□ 1.43
TRIM65-202ENST00000540128 ERVFC1P60507 584 aa24.01■■□□□ 1.43
TRIM65-202ENST00000540128 PPP2R3AQ06190 1150 aa24.01■■□□□ 1.43
TRIM65-202ENST00000540128 SOX4Q06945 474 aaPredicted RBP24.01■■□□□ 1.43
TRIM65-202ENST00000540128 TIGD5Q53EQ6 642 aa24.01■■□□□ 1.43
TRIM65-202ENST00000540128 HS2ST1Q7LGA3 356 aa24.01■■□□□ 1.43
TRIM65-202ENST00000540128 RNF168Q8IYW5 571 aaPredicted RBP24.01■■□□□ 1.43
TRIM65-202ENST00000540128 GUF1Q8N442 669 aaKnown RBP24.01■■□□□ 1.43
TRIM65-202ENST00000540128 MAFAQ8NHW3 353 aaPredicted RBP24.01■■□□□ 1.43
TRIM65-202ENST00000540128 SMARCE1Q969G3 411 aa24.01■■□□□ 1.43
TRIM65-202ENST00000540128 DDX27Q96GQ7 796 aaKnown RBP24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms