RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 RFC5P40937 340 aa6.43□□□□□ -1.38
PTPRD-214ENST00000540109 TECP42680 631 aa6.43□□□□□ -1.38
PTPRD-214ENST00000540109 PTGISQ16647 500 aa6.43□□□□□ -1.38
PTPRD-214ENST00000540109 GSTA3Q16772 222 aa6.43□□□□□ -1.38
PTPRD-214ENST00000540109 P3H1Q32P28 736 aa6.43□□□□□ -1.38
PTPRD-214ENST00000540109 PCNX4Q63HM2 1172 aa6.43□□□□□ -1.38
PTPRD-214ENST00000540109 SMYD5Q6GMV2 418 aa6.43□□□□□ -1.38
PTPRD-214ENST00000540109 NIPA1Q7RTP0 329 aa6.43□□□□□ -1.38
PTPRD-214ENST00000540109 HEATR4Q86WZ0 1026 aa6.43□□□□□ -1.38
PTPRD-214ENST00000540109 REXO1L1PQ8IX06 675 aa6.43□□□□□ -1.38
PTPRD-214ENST00000540109 THAP11Q96EK4 314 aa6.43□□□□□ -1.38
PTPRD-214ENST00000540109 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.43□□□□□ -1.38
PTPRD-214ENST00000540109 KCNQ5Q9NR82 932 aa6.43□□□□□ -1.38
PTPRD-214ENST00000540109 ABHD10Q9NUJ1 306 aa6.43□□□□□ -1.38
PTPRD-214ENST00000540109 SEL1LQ9UBV2 794 aa6.43□□□□□ -1.38
PTPRD-214ENST00000540109 ZNF646O15015 1829 aaPredicted RBP6.42□□□□□ -1.38
PTPRD-214ENST00000540109 BIRC5O15392 142 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 GGPS1O95749 300 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 MAGEA8P43361 318 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 SCNN1DP51172 638 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 GRB10Q13322 594 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 ITGA9Q13797 1035 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 SPDYE2Q495Y8 402 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 IRGCQ6NXR0 463 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 RGS9BPQ6ZS82 235 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 CCDC125Q86Z20 511 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 STAMQ92783 540 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 TIPINQ9BVW5 301 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 NACA2Q9H009 215 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 METTL14Q9HCE5 456 aaKnown RBP6.42□□□□□ -1.38
PTPRD-214ENST00000540109 OLFML3Q9NRN5 406 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 FAM198AQ9UFP1 575 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 CCPG1Q9ULG6 757 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 WDR37Q9Y2I8 494 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 TMX2Q9Y320 296 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 SMIM31A0A1B0GVY4 71 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 CCDC162PA2VCL2 907 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 SPDYE2BA6NHP3 402 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 LCA5LO95447 670 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 SPDYE6P0CI01 402 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 ESRRAP11474 423 aaPredicted RBP6.42□□□□□ -1.38
PTPRD-214ENST00000540109 ACADVLP49748 655 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 MARSP56192 900 aaKnown RBP6.42□□□□□ -1.38
PTPRD-214ENST00000540109 RCN1Q15293 331 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 XRRA1Q6P2D8 792 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 C1orf228Q6PIY5 440 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 POTEEQ6S8J3 1075 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 PRR23CQ6ZRP0 262 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 HORMAD1Q86X24 394 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.42□□□□□ -1.38
PTPRD-214ENST00000540109 PPP4R1Q8TF05 950 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 LPAR1Q92633 364 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 RNPC3Q96LT9 517 aaKnown RBP6.42□□□□□ -1.38
PTPRD-214ENST00000540109 TTC25Q96NG3 672 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 TUBGCP2Q9BSJ2 902 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 DBNDD1Q9H9R9 158 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 AASDHPPTQ9NRN7 309 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 TBK1Q9UHD2 729 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 AMFRQ9UKV5 643 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 ADGRG1Q9Y653 693 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 MIF4GDA9UHW6 222 aaKnown RBP6.42□□□□□ -1.38
PTPRD-214ENST00000540109 F5H6K3 240 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 HNRNPRO43390 633 aaKnown RBP6.42□□□□□ -1.38
PTPRD-214ENST00000540109 CALUO43852 315 aaPredicted RBP6.42□□□□□ -1.38
PTPRD-214ENST00000540109 EEF1B2P24534 225 aaKnown RBP6.42□□□□□ -1.38
PTPRD-214ENST00000540109 STAT2P52630 851 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 ADARP55265 1226 aaKnown RBP6.42□□□□□ -1.38
PTPRD-214ENST00000540109 NUP107P57740 925 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 FKBP3Q00688 224 aaKnown RBP6.42□□□□□ -1.38
PTPRD-214ENST00000540109 KLRC3Q07444 240 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 EHHADHQ08426 723 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 RIPK1Q13546 671 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 LRRC14Q15048 493 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 FAM26FQ5R3K3 315 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 NLRP9Q7RTR0 991 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 PEX26Q7Z412 305 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 CNOT6LQ96LI5 555 aaKnown RBP6.42□□□□□ -1.38
PTPRD-214ENST00000540109 VPS37BQ9H9H4 285 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 SYBUQ9NX95 663 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 ZNRF3Q9ULT6 936 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 ARL2BPQ9Y2Y0 163 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 SLC16A3O15427 465 aaKnown RBP6.42□□□□□ -1.38
PTPRD-214ENST00000540109 MAFGO15525 162 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 AGTP01019 485 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 KRT8P05787 483 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 TMOD1P28289 359 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 HNRNPH3P31942 346 aaKnown RBP6.42□□□□□ -1.38
PTPRD-214ENST00000540109 PPP2R5CQ13362 524 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 CWF19L1Q69YN2 538 aaKnown RBP6.42□□□□□ -1.38
PTPRD-214ENST00000540109 SHQ1Q6PI26 577 aaKnown RBP6.42□□□□□ -1.38
PTPRD-214ENST00000540109 CTAGE3PQ8IX95 158 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 SDCCAG3Q96C92 435 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 CSRNP1Q96S65 589 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 PNKPQ96T60 521 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 ROPN1BQ9BZX4 212 aaPredicted RBP6.42□□□□□ -1.38
PTPRD-214ENST00000540109 ROPN1Q9HAT0 212 aaPredicted RBP6.42□□□□□ -1.38
PTPRD-214ENST00000540109 FAM207AQ9NSI2 230 aaPredicted RBP6.42□□□□□ -1.38
PTPRD-214ENST00000540109 MOSPD1Q9UJG1 213 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 DNM3Q9UQ16 869 aa6.42□□□□□ -1.38
PTPRD-214ENST00000540109 COMMD3-BMI1R4GMX3 469 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms