RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 TMEM82A0PJX8 343 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 ASB14A6NK59 587 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 GRM6O15303 877 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 PSPNO60542 156 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 PARNO95453 639 aaKnown RBP4.67□□□□□ -1.66
C2CD3-214ENST00000540057 CYP2D6P10635 497 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 CKBP12277 381 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 GBP1P32455 592 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 CPT1AP50416 773 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 RRP1P56182 461 aaKnown RBP4.67□□□□□ -1.66
C2CD3-214ENST00000540057 RBL2Q08999 1139 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 DUSP4Q13115 394 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 SNW1Q13573 536 aaKnown RBP4.67□□□□□ -1.66
C2CD3-214ENST00000540057 MRPL58Q14197 206 aaKnown RBP4.67□□□□□ -1.66
C2CD3-214ENST00000540057 ACAP1Q15027 740 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 PTGISQ16647 500 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 BBS9Q3SYG4 887 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 DUSP28Q4G0W2 176 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 TTC39AQ5SRH9 613 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 TTLL10Q6ZVT0 673 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 TMC3Q7Z5M5 1100 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 ZNF605Q86T29 641 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 NLRX1Q86UT6 975 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 CERS3Q8IU89 383 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 MYOCDQ8IZQ8 938 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 PRPF38AQ8NAV1 312 aaKnown RBP4.67□□□□□ -1.66
C2CD3-214ENST00000540057 SMRP1Q8NCR6 262 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 CHST13Q8NET6 341 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 DYNLL2Q96FJ2 89 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 RPGRIP1Q96KN7 1286 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 SLF1Q9BQI6 1058 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 RIOK1Q9BRS2 568 aaKnown RBP4.67□□□□□ -1.66
C2CD3-214ENST00000540057 PHF7Q9BWX1 381 aaPredicted RBP4.67□□□□□ -1.66
C2CD3-214ENST00000540057 KRTAP4-2Q9BYR5 136 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 EHMT1Q9H9B1 1298 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 GCM1Q9NP62 436 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 A1CFQ9NQ94 594 aaKnown RBP4.67□□□□□ -1.66
C2CD3-214ENST00000540057 INCENPQ9NQS7 918 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 MCM9Q9NXL9 1143 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 CLEC1BQ9P126 229 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 FBXO40Q9UH90 709 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 ADAMTS1Q9UHI8 967 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 GPR160Q9UJ42 338 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 MYO10Q9HD67 2058 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 LCTP09848 1927 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 NCOR2Q9Y618 2525 aa4.67□□□□□ -1.66
C2CD3-214ENST00000540057 C5orf67F2Z3F1 127 aa4.66□□□□□ -1.66
C2CD3-214ENST00000540057 SRGAP3O43295 1099 aa4.66□□□□□ -1.66
C2CD3-214ENST00000540057 ZBED4O75132 1171 aa4.66□□□□□ -1.66
C2CD3-214ENST00000540057 IDH1O75874 414 aaKnown RBP4.66□□□□□ -1.66
C2CD3-214ENST00000540057 AMHP03971 560 aa4.66□□□□□ -1.66
C2CD3-214ENST00000540057 LINC00271P0C7V0 271 aa4.66□□□□□ -1.66
C2CD3-214ENST00000540057 EIF4A3P38919 411 aaKnown RBP4.66□□□□□ -1.66
C2CD3-214ENST00000540057 NDUFV1P49821 464 aa4.66□□□□□ -1.66
C2CD3-214ENST00000540057 OAZ1P54368 228 aa4.66□□□□□ -1.66
C2CD3-214ENST00000540057 RNF4P78317 190 aa4.66□□□□□ -1.66
C2CD3-214ENST00000540057 DLG4P78352 724 aa4.66□□□□□ -1.66
C2CD3-214ENST00000540057 COASYQ13057 564 aa4.66□□□□□ -1.66
C2CD3-214ENST00000540057 CLEC16AQ2KHT3 1053 aa4.66□□□□□ -1.66
C2CD3-214ENST00000540057 CCDC158Q5M9N0 1113 aa4.66□□□□□ -1.66
C2CD3-214ENST00000540057 CDCP2Q5VXM1 449 aa4.66□□□□□ -1.66
C2CD3-214ENST00000540057 RNF111Q6ZNA4 994 aa4.66□□□□□ -1.66
C2CD3-214ENST00000540057 DAGLBQ8NCG7 672 aa4.66□□□□□ -1.66
C2CD3-214ENST00000540057 OR6J1Q8NGC5 347 aa4.66□□□□□ -1.66
C2CD3-214ENST00000540057 ENOX1Q8TC92 643 aaKnown RBP4.66□□□□□ -1.66
C2CD3-214ENST00000540057 MORC4Q8TE76 937 aa4.66□□□□□ -1.66
C2CD3-214ENST00000540057 KCNN1Q92952 543 aa4.66□□□□□ -1.66
C2CD3-214ENST00000540057 TCTN2Q96GX1 697 aa4.66□□□□□ -1.66
C2CD3-214ENST00000540057 MAP6Q96JE9 813 aa4.66□□□□□ -1.66
C2CD3-214ENST00000540057 CCDC17Q96LX7 622 aa4.66□□□□□ -1.66
C2CD3-214ENST00000540057 YME1L1Q96TA2 773 aa4.66□□□□□ -1.66
C2CD3-214ENST00000540057 FOXP3Q9BZS1 431 aa4.66□□□□□ -1.66
C2CD3-214ENST00000540057 LMAN2LQ9H0V9 348 aa4.66□□□□□ -1.66
C2CD3-214ENST00000540057 ZNF552Q9H707 407 aaPredicted RBP4.66□□□□□ -1.66
C2CD3-214ENST00000540057 PRKRIP1Q9H875 184 aaPredicted RBP4.66□□□□□ -1.66
C2CD3-214ENST00000540057 CNNM2Q9H8M5 875 aa4.66□□□□□ -1.66
C2CD3-214ENST00000540057 KANSL2Q9H9L4 492 aa4.66□□□□□ -1.66
C2CD3-214ENST00000540057 SLC38A10Q9HBR0 1119 aa4.66□□□□□ -1.66
C2CD3-214ENST00000540057 VTA1Q9NP79 307 aa4.66□□□□□ -1.66
C2CD3-214ENST00000540057 HOMER2Q9NSB8 354 aa4.66□□□□□ -1.66
C2CD3-214ENST00000540057 SWAP70Q9UH65 585 aa4.66□□□□□ -1.66
C2CD3-214ENST00000540057 USP15Q9Y4E8 981 aaPredicted RBP4.66□□□□□ -1.66
C2CD3-214ENST00000540057 SUPT16HQ9Y5B9 1047 aaKnown RBP4.66□□□□□ -1.66
C2CD3-214ENST00000540057 BAZ2AQ9UIF9 1905 aaKnown RBP4.66□□□□□ -1.66
C2CD3-214ENST00000540057 E9PSI1 815 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 F5H6K3 240 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 KPNA6O60684 536 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 SEMA7AO75326 666 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 CSPG5O95196 566 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 PRAMEF1O95521 474 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 GLP2RO95838 553 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 NDUFB10O96000 172 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 LMNAP02545 664 aaKnown RBP4.65□□□□□ -1.67
C2CD3-214ENST00000540057 RB1P06400 928 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 ARP10275 920 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 CTNNB1P35222 781 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 CHMP4BP1P59074 171 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 CLCQ05315 142 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 KLRC3Q07444 240 aa4.65□□□□□ -1.67
C2CD3-214ENST00000540057 DDX10Q13206 875 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms