RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 SNX27Q96L92 541 aa20.01■□□□□ 0.79
SNRPA1-203ENST00000540017 ZMAT2Q96NC0 199 aaKnown RBP20.01■□□□□ 0.79
SNRPA1-203ENST00000540017 ACAP3Q96P50 834 aa20.01■□□□□ 0.79
SNRPA1-203ENST00000540017 PPP1R10Q96QC0 940 aaKnown RBP20.01■□□□□ 0.79
SNRPA1-203ENST00000540017 SCAND2PQ9GZW5 306 aaPredicted RBP20.01■□□□□ 0.79
SNRPA1-203ENST00000540017 NGRNQ9NPE2 291 aaKnown RBP20.01■□□□□ 0.79
SNRPA1-203ENST00000540017 OLFML3Q9NRN5 406 aa20.01■□□□□ 0.79
SNRPA1-203ENST00000540017 SERTAD1Q9UHV2 236 aa20.01■□□□□ 0.79
SNRPA1-203ENST00000540017 HPSEQ9Y251 543 aa20.01■□□□□ 0.79
SNRPA1-203ENST00000540017 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20■□□□□ 0.79
SNRPA1-203ENST00000540017 SMIM28A0A1B0GU29 152 aa20■□□□□ 0.79
SNRPA1-203ENST00000540017 C2orf71A6NGG8 1288 aa20■□□□□ 0.79
SNRPA1-203ENST00000540017 H3BQ06 376 aaPredicted RBP20■□□□□ 0.79
SNRPA1-203ENST00000540017 ACTN4O43707 911 aaKnown RBP20■□□□□ 0.79
SNRPA1-203ENST00000540017 FAM189A1O60320 539 aa20■□□□□ 0.79
SNRPA1-203ENST00000540017 TBX10O75333 385 aa20■□□□□ 0.79
SNRPA1-203ENST00000540017 CXCL14O95715 111 aa20■□□□□ 0.79
SNRPA1-203ENST00000540017 GLP2RO95838 553 aa20■□□□□ 0.79
SNRPA1-203ENST00000540017 TNFSF9P41273 254 aa20■□□□□ 0.79
SNRPA1-203ENST00000540017 MATR3P43243 847 aaKnown RBP eCLIP20■□□□□ 0.791e-7■■□□□ 11.4
SNRPA1-203ENST00000540017 YARSP54577 528 aaKnown RBP20■□□□□ 0.79
SNRPA1-203ENST00000540017 SMC1AQ14683 1233 aaKnown RBP20■□□□□ 0.79
SNRPA1-203ENST00000540017 DUSP6Q16828 381 aa20■□□□□ 0.79
SNRPA1-203ENST00000540017 SLC10A6Q3KNW5 377 aa20■□□□□ 0.79
SNRPA1-203ENST00000540017 TPRNQ4KMQ1 711 aa20■□□□□ 0.79
SNRPA1-203ENST00000540017 ZBTB41Q5SVQ8 909 aa20■□□□□ 0.79
SNRPA1-203ENST00000540017 CNNM4Q6P4Q7 775 aa20■□□□□ 0.79
SNRPA1-203ENST00000540017 EFHBQ8N7U6 833 aa20■□□□□ 0.79
SNRPA1-203ENST00000540017 GLIS3Q8NEA6 775 aa20■□□□□ 0.79
SNRPA1-203ENST00000540017 C7orf25Q9BPX7 421 aa20■□□□□ 0.79
SNRPA1-203ENST00000540017 BLZF1Q9H2G9 400 aa20■□□□□ 0.79
SNRPA1-203ENST00000540017 A0A0B4J269 797 aa19.99■□□□□ 0.79
SNRPA1-203ENST00000540017 NCK2O43639 380 aa19.99■□□□□ 0.79
SNRPA1-203ENST00000540017 CTSAP10619 480 aa19.99■□□□□ 0.79
SNRPA1-203ENST00000540017 BMP1P13497 986 aa19.99■□□□□ 0.79
SNRPA1-203ENST00000540017 AFMP43652 599 aa19.99■□□□□ 0.79
SNRPA1-203ENST00000540017 ASIC1P78348 528 aa19.99■□□□□ 0.79
SNRPA1-203ENST00000540017 AMPD3Q01432 767 aa19.99■□□□□ 0.79
SNRPA1-203ENST00000540017 SOX4Q06945 474 aaPredicted RBP19.99■□□□□ 0.79
SNRPA1-203ENST00000540017 TJAP1Q5JTD0 557 aa19.99■□□□□ 0.79
SNRPA1-203ENST00000540017 CCDC65Q8IXS2 484 aa19.99■□□□□ 0.79
SNRPA1-203ENST00000540017 RNF168Q8IYW5 571 aaPredicted RBP19.99■□□□□ 0.79
SNRPA1-203ENST00000540017 PPP2R3CQ969Q6 453 aa19.99■□□□□ 0.79
SNRPA1-203ENST00000540017 COLEC11Q9BWP8 271 aa19.99■□□□□ 0.79
SNRPA1-203ENST00000540017 GPR62Q9BZJ7 368 aa19.99■□□□□ 0.79
SNRPA1-203ENST00000540017 LRRC27Q9C0I9 530 aa19.99■□□□□ 0.79
SNRPA1-203ENST00000540017 GOLGA2P5Q9HBQ8 144 aa19.99■□□□□ 0.79
SNRPA1-203ENST00000540017 TOPORSQ9NS56 1045 aaPredicted RBP19.99■□□□□ 0.79
SNRPA1-203ENST00000540017 FAM237AA0A1B0GTK4 181 aa19.98■□□□□ 0.79
SNRPA1-203ENST00000540017 GCNT3O95395 438 aa19.98■□□□□ 0.79
SNRPA1-203ENST00000540017 SLFN14P0C7P3 912 aa19.98■□□□□ 0.79
SNRPA1-203ENST00000540017 CXCL8P10145 99 aa19.98■□□□□ 0.79
SNRPA1-203ENST00000540017 KCNE1P15382 129 aa19.98■□□□□ 0.79
SNRPA1-203ENST00000540017 ABCD1P33897 745 aa19.98■□□□□ 0.79
SNRPA1-203ENST00000540017 NDUFA8P51970 172 aa19.98■□□□□ 0.79
SNRPA1-203ENST00000540017 CUL4BQ13620 913 aa19.98■□□□□ 0.79
SNRPA1-203ENST00000540017 KCNC3Q14003 757 aa19.98■□□□□ 0.79
SNRPA1-203ENST00000540017 HSP90AA2PQ14568 343 aaPredicted RBP19.98■□□□□ 0.79
SNRPA1-203ENST00000540017 PTPN14Q15678 1187 aa19.98■□□□□ 0.79
SNRPA1-203ENST00000540017 LEXMQ3ZCV2 418 aa19.98■□□□□ 0.79
SNRPA1-203ENST00000540017 L1TD1Q5T7N2 865 aaKnown RBP19.98■□□□□ 0.79
SNRPA1-203ENST00000540017 TMEM130Q8N3G9 435 aa19.98■□□□□ 0.79
SNRPA1-203ENST00000540017 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.98■□□□□ 0.79
SNRPA1-203ENST00000540017 HASPINQ8TF76 798 aa19.98■□□□□ 0.79
SNRPA1-203ENST00000540017 HVCN1Q96D96 273 aa19.98■□□□□ 0.79
SNRPA1-203ENST00000540017 GOLPH3LQ9H4A5 285 aa19.98■□□□□ 0.79
SNRPA1-203ENST00000540017 MAGEF1Q9HAY2 307 aa19.98■□□□□ 0.79
SNRPA1-203ENST00000540017 CLEC1BQ9P126 229 aa19.98■□□□□ 0.79
SNRPA1-203ENST00000540017 CNTN3Q9P232 1028 aa19.98■□□□□ 0.79
SNRPA1-203ENST00000540017 IRAK3Q9Y616 596 aa19.98■□□□□ 0.79
SNRPA1-203ENST00000540017 STYXL1Q9Y6J8 313 aa19.98■□□□□ 0.79
SNRPA1-203ENST00000540017 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.97■□□□□ 0.79
SNRPA1-203ENST00000540017 OGTO15294 1046 aa19.97■□□□□ 0.79
SNRPA1-203ENST00000540017 LILRB3O75022 631 aa19.97■□□□□ 0.79
SNRPA1-203ENST00000540017 NR1I2O75469 434 aa19.97■□□□□ 0.79
SNRPA1-203ENST00000540017 PRPF6O94906 941 aaKnown RBP19.97■□□□□ 0.79
SNRPA1-203ENST00000540017 KIF4AO95239 1232 aa19.97■□□□□ 0.79
SNRPA1-203ENST00000540017 SOD2P04179 222 aa19.97■□□□□ 0.79
SNRPA1-203ENST00000540017 CLTAP09496 248 aa19.97■□□□□ 0.79
SNRPA1-203ENST00000540017 ADSSP30520 456 aa19.97■□□□□ 0.79
SNRPA1-203ENST00000540017 CA8P35219 290 aa19.97■□□□□ 0.79
SNRPA1-203ENST00000540017 AAK1Q2M2I8 961 aa19.97■□□□□ 0.79
SNRPA1-203ENST00000540017 FUT10Q6P4F1 479 aa19.97■□□□□ 0.79
SNRPA1-203ENST00000540017 CD300LGQ6UXG3 332 aa19.97■□□□□ 0.79
SNRPA1-203ENST00000540017 C18orf25Q96B23 403 aaPredicted RBP19.97■□□□□ 0.79
SNRPA1-203ENST00000540017 B3GALT6Q96L58 329 aa19.97■□□□□ 0.79
SNRPA1-203ENST00000540017 MSTO1Q9BUK6 570 aa19.97■□□□□ 0.79
SNRPA1-203ENST00000540017 HERC2P3Q9BVR0 1158 aa19.97■□□□□ 0.79
SNRPA1-203ENST00000540017 ADAM28Q9UKQ2 775 aa19.97■□□□□ 0.79
SNRPA1-203ENST00000540017 BARX2Q9UMQ3 279 aaPredicted RBP19.97■□□□□ 0.79
SNRPA1-203ENST00000540017 CITO14578 2027 aa19.97■□□□□ 0.79
SNRPA1-203ENST00000540017 A0A1W2PQ27 194 aa19.96■□□□□ 0.79
SNRPA1-203ENST00000540017 A0A1W2PQ64 194 aa19.96■□□□□ 0.79
SNRPA1-203ENST00000540017 A0A1W2PQD8 194 aa19.96■□□□□ 0.79
SNRPA1-203ENST00000540017 TTC26A0AVF1 554 aa19.96■□□□□ 0.79
SNRPA1-203ENST00000540017 CLASP2O75122 1294 aaKnown RBP19.96■□□□□ 0.79
SNRPA1-203ENST00000540017 CLCNKBP51801 687 aa19.96■□□□□ 0.79
SNRPA1-203ENST00000540017 EHHADHQ08426 723 aa19.96■□□□□ 0.79
SNRPA1-203ENST00000540017 CLUL1Q15846 466 aa19.96■□□□□ 0.79
SNRPA1-203ENST00000540017 ENOX2Q16206 610 aaKnown RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms