RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 A0A0B4J269 797 aa18.43■□□□□ 0.54
PCDHB17P-201ENST00000539533 IGHA2P01877 340 aa18.43■□□□□ 0.54
PCDHB17P-201ENST00000539533 PRKCBP05771 671 aa18.43■□□□□ 0.54
PCDHB17P-201ENST00000539533 HARSP12081 509 aaKnown RBP18.43■□□□□ 0.54
PCDHB17P-201ENST00000539533 WNT7BP56706 349 aa18.43■□□□□ 0.54
PCDHB17P-201ENST00000539533 GFPT1Q06210 699 aaPredicted RBP18.43■□□□□ 0.54
PCDHB17P-201ENST00000539533 MAPK6Q16659 721 aa18.43■□□□□ 0.54
PCDHB17P-201ENST00000539533 SLFN12LQ6IEE8 588 aa18.43■□□□□ 0.54
PCDHB17P-201ENST00000539533 MTHFD1LQ6UB35 978 aa18.43■□□□□ 0.54
PCDHB17P-201ENST00000539533 RIN2Q8WYP3 895 aaPredicted RBP18.43■□□□□ 0.54
PCDHB17P-201ENST00000539533 SELENOOQ9BVL4 669 aa18.43■□□□□ 0.54
PCDHB17P-201ENST00000539533 MINDY3Q9H8M7 445 aa18.43■□□□□ 0.54
PCDHB17P-201ENST00000539533 JRKLQ9Y4A0 524 aa18.43■□□□□ 0.54
PCDHB17P-201ENST00000539533 ZSWIM8A7E2V4 1837 aa18.43■□□□□ 0.54
PCDHB17P-201ENST00000539533 SSU72P8A0A1W2PR75 194 aa18.42■□□□□ 0.54
PCDHB17P-201ENST00000539533 MACROD2A1Z1Q3 448 aa18.42■□□□□ 0.54
PCDHB17P-201ENST00000539533 P4HA2O15460 535 aa18.42■□□□□ 0.54
PCDHB17P-201ENST00000539533 MAGEB2O15479 319 aa18.42■□□□□ 0.54
PCDHB17P-201ENST00000539533 GGCXP38435 758 aa18.42■□□□□ 0.54
PCDHB17P-201ENST00000539533 PSMC4P43686 418 aa18.42■□□□□ 0.54
PCDHB17P-201ENST00000539533 KLHL30Q0D2K2 578 aa18.42■□□□□ 0.54
PCDHB17P-201ENST00000539533 CETN1Q12798 172 aa18.42■□□□□ 0.54
PCDHB17P-201ENST00000539533 PPFIA1Q13136 1202 aa18.42■□□□□ 0.54
PCDHB17P-201ENST00000539533 SPA17Q15506 151 aa18.42■□□□□ 0.54
PCDHB17P-201ENST00000539533 GRIK4Q16099 956 aa18.42■□□□□ 0.54
PCDHB17P-201ENST00000539533 MARCH8Q5T0T0 291 aa18.42■□□□□ 0.54
PCDHB17P-201ENST00000539533 LINC01465Q8N7H1 131 aa18.42■□□□□ 0.54
PCDHB17P-201ENST00000539533 MRPL4Q9BYD3 311 aaKnown RBP18.42■□□□□ 0.54
PCDHB17P-201ENST00000539533 CLDN3O15551 220 aa18.42■□□□□ 0.54
PCDHB17P-201ENST00000539533 KIF5AQ12840 1032 aa18.42■□□□□ 0.54
PCDHB17P-201ENST00000539533 IRF5Q13568 498 aa18.42■□□□□ 0.54
PCDHB17P-201ENST00000539533 TFDP1Q14186 410 aa18.42■□□□□ 0.54
PCDHB17P-201ENST00000539533 KRT39Q6A163 491 aa18.42■□□□□ 0.54
PCDHB17P-201ENST00000539533 ZPBP2Q6X784 338 aa18.42■□□□□ 0.54
PCDHB17P-201ENST00000539533 ZBTB33Q86T24 672 aa18.42■□□□□ 0.54
PCDHB17P-201ENST00000539533 SEMA4DQ92854 862 aa18.42■□□□□ 0.54
PCDHB17P-201ENST00000539533 SECISBP2LQ93073 1101 aaKnown RBP18.42■□□□□ 0.54
PCDHB17P-201ENST00000539533 ACO2Q99798 780 aaKnown RBP18.42■□□□□ 0.54
PCDHB17P-201ENST00000539533 C2orf40Q9H1Z8 148 aa18.42■□□□□ 0.54
PCDHB17P-201ENST00000539533 KIAA1586Q9HCI6 787 aa18.42■□□□□ 0.54
PCDHB17P-201ENST00000539533 GABRQQ9UN88 632 aa18.42■□□□□ 0.54
PCDHB17P-201ENST00000539533 INO80B-WBP1J3KQ70 363 aa18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 ASAP2O43150 1006 aa18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 CSDE1O75534 798 aaKnown RBP18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 LCA5LO95447 670 aa18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 VTNP04004 478 aa18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 IQCF3P0C7M6 154 aa18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 VAV2P52735 878 aa18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 PTENP60484 403 aa18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 C2orf54Q08AI8 447 aa18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 DRAP1Q14919 205 aaPredicted RBP18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 LMBRD2Q68DH5 695 aaPredicted RBP18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 ARHGEF19Q8IW93 802 aa18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 TCHPQ9BT92 498 aa18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 STK33Q9BYT3 514 aa18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 TSGA10Q9BZW7 698 aa18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 INO80BQ9C086 356 aaPredicted RBP18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 IFT122Q9HBG6 1241 aa18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 SETD4Q9NVD3 440 aa18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 AKT3Q9Y243 479 aa18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 COL1A2P08123 1366 aa18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 ANKRD65E5RJM6 399 aa18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 AGPSO00116 658 aa18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 B4GALT5O43286 388 aa18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 ARHGAP44Q17R89 818 aa18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 SV2AQ7L0J3 742 aa18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 ZNF516Q92618 1163 aa18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 KAT2BQ92831 832 aa18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 GPR88Q9GZN0 384 aa18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 FZD8Q9H461 694 aa18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 TMEM8AQ9HCN3 771 aa18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 UBE2TQ9NPD8 197 aaPredicted RBP18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 PCDHA13Q9Y5I0 950 aa18.41■□□□□ 0.54
PCDHB17P-201ENST00000539533 A0A087WZ62 844 aa18.4■□□□□ 0.54
PCDHB17P-201ENST00000539533 F8VZ95 297 aa18.4■□□□□ 0.54
PCDHB17P-201ENST00000539533 KIAA0391O15091 583 aaKnown RBP18.4■□□□□ 0.54
PCDHB17P-201ENST00000539533 PMM2O15305 246 aa18.4■□□□□ 0.54
PCDHB17P-201ENST00000539533 TOM1L1O75674 476 aa18.4■□□□□ 0.54
PCDHB17P-201ENST00000539533 GFPT2O94808 682 aa18.4■□□□□ 0.54
PCDHB17P-201ENST00000539533 LACTBP83111 547 aaPredicted RBP18.4■□□□□ 0.54
PCDHB17P-201ENST00000539533 BEX3Q00994 111 aa18.4■□□□□ 0.54
PCDHB17P-201ENST00000539533 CAP1Q01518 475 aa18.4■□□□□ 0.54
PCDHB17P-201ENST00000539533 PTK2Q05397 1052 aa18.4■□□□□ 0.54
PCDHB17P-201ENST00000539533 MBTD1Q05BQ5 628 aa18.4■□□□□ 0.54
PCDHB17P-201ENST00000539533 ZNF571Q7Z3V5 609 aaPredicted RBP18.4■□□□□ 0.54
PCDHB17P-201ENST00000539533 USP37Q86T82 979 aa18.4■□□□□ 0.54
PCDHB17P-201ENST00000539533 CDR2LQ86X02 465 aaPredicted RBP18.4■□□□□ 0.54
PCDHB17P-201ENST00000539533 TAS1R2Q8TE23 839 aa18.4■□□□□ 0.54
PCDHB17P-201ENST00000539533 ELMO3Q96BJ8 720 aa18.4■□□□□ 0.54
PCDHB17P-201ENST00000539533 FDXACB1Q9BRP7 624 aaPredicted RBP18.4■□□□□ 0.54
PCDHB17P-201ENST00000539533 PLEKHA4Q9H4M7 779 aa18.4■□□□□ 0.54
PCDHB17P-201ENST00000539533 ADAMTS1Q9UHI8 967 aa18.4■□□□□ 0.54
PCDHB17P-201ENST00000539533 MGAMO43451 1857 aa18.4■□□□□ 0.54
PCDHB17P-201ENST00000539533 LDHAP00338 332 aaKnown RBP18.4■□□□□ 0.54
PCDHB17P-201ENST00000539533 FCGRTP55899 365 aa18.4■□□□□ 0.54
PCDHB17P-201ENST00000539533 CORO7P57737 925 aa18.4■□□□□ 0.54
PCDHB17P-201ENST00000539533 NOGQ13253 232 aa18.4■□□□□ 0.54
PCDHB17P-201ENST00000539533 PSMD6Q15008 389 aa18.4■□□□□ 0.54
PCDHB17P-201ENST00000539533 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.4■□□□□ 0.54
PCDHB17P-201ENST00000539533 IFIH1Q9BYX4 1025 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms