RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 DGKDQ16760 1214 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 FLYWCH1Q4VC44 716 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 KANK2Q63ZY3 851 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 STEAP3Q658P3 488 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 TMC6Q7Z403 805 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 ZDHHC14Q8IZN3 488 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 ZMIZ2Q8NF64 920 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 OR14C36Q8NHC7 312 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 ZSCAN18Q8TBC5 510 aaPredicted RBP1.31□□□□□ -2.2
HIF1A-204ENST00000539097 HIST1H2AHQ96KK5 128 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 TTC14Q96N46 770 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 LMTK3Q96Q04 1460 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 HIST1H2AJQ99878 128 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 TMEM79Q9BSE2 394 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 MAF1Q9H063 256 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 RNF32Q9H0A6 362 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 ARMT1Q9H993 441 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 VPS45Q9NRW7 570 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 RIC8BQ9NVN3 520 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 MKS1Q9NXB0 559 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 PI4KBQ9UBF8 816 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 FTSJ1Q9UET6 329 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 AJAP1Q9UKB5 411 aaPredicted RBP1.31□□□□□ -2.2
HIF1A-204ENST00000539097 PHTF1Q9UMS5 762 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 PCDHB4Q9Y5E5 795 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 SLC30A1Q9Y6M5 507 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 NUDT19A8MXV4 375 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 IQCJ-SCHIP1C9J366 451 aaPredicted RBP1.31□□□□□ -2.2
HIF1A-204ENST00000539097 AMHP03971 560 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 AMY1AP04745 511 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 HNRNPLP14866 589 aaKnown RBP eCLIP1.31□□□□□ -2.22e-6■■□□□ 12.3
HIF1A-204ENST00000539097 ATF2P15336 505 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 MCAMP43121 646 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 GABRB2P47870 512 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 EPHB4P54760 987 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 AK2P54819 239 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 NAP1L1P55209 391 aaKnown RBP1.31□□□□□ -2.2
HIF1A-204ENST00000539097 ST5P78524 1137 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 TLE2Q04725 743 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 ZP2Q05996 745 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 CD69Q07108 199 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 FOXD4Q12950 439 aaPredicted RBP1.31□□□□□ -2.2
HIF1A-204ENST00000539097 DHX8Q14562 1220 aaKnown RBP1.31□□□□□ -2.2
HIF1A-204ENST00000539097 TBR1Q16650 682 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 ZMAT1Q5H9K5 638 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 INTS11Q5TA45 600 aaKnown RBP1.31□□□□□ -2.2
HIF1A-204ENST00000539097 TSHZ1Q6ZSZ6 1077 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 RFX8Q6ZV50 586 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 ZC3H18Q86VM9 953 aaKnown RBP1.31□□□□□ -2.2
HIF1A-204ENST00000539097 PPP1R3BQ86XI6 285 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 GAS2L3Q86XJ1 694 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 LIX1LQ8IVB5 337 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 RPAP2Q8IXW5 612 aaPredicted RBP1.31□□□□□ -2.2
HIF1A-204ENST00000539097 SPATA5Q8NB90 893 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 C3orf20Q8ND61 904 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 CLIP3Q96DZ5 547 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 GBP4Q96PP9 640 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 ALPK1Q96QP1 1244 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 CENPOQ9BU64 300 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 RNF26Q9BY78 433 aaPredicted RBP1.31□□□□□ -2.2
HIF1A-204ENST00000539097 LDHAL6BQ9BYZ2 381 aaPredicted RBP1.31□□□□□ -2.2
HIF1A-204ENST00000539097 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP1.31□□□□□ -2.2
HIF1A-204ENST00000539097 SAE1Q9UBE0 346 aaPredicted RBP1.31□□□□□ -2.2
HIF1A-204ENST00000539097 PRSS50Q9UI38 385 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 CDC42EP3Q9UKI2 254 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 SPATA31A5Q5VU36 1347 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 SPATA31A6Q5VVP1 1343 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 FRMPD2Q68DX3 1309 aaPredicted RBP1.3□□□□□ -2.2
HIF1A-204ENST00000539097 MYPNQ86TC9 1320 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 SPATA31A7Q8IWB4 1347 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 RPTORQ8N122 1335 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP1.3□□□□□ -2.2
HIF1A-204ENST00000539097 MYOCOSA0A1B0GUC4 107 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 GAGE12BA1L429 117 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 GAGE12HA6NDE8 117 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 PRAMEF25A6NGN4 478 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 CCDC154A6NI56 674 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 PHGDHO43175 533 aaKnown RBP1.3□□□□□ -2.2
HIF1A-204ENST00000539097 TSPAN3O60637 253 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 PRPF6O94906 941 aaKnown RBP1.3□□□□□ -2.2
HIF1A-204ENST00000539097 ERBB2P04626 1255 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 GLI1P08151 1106 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 IDEP14735 1019 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 EN2P19622 333 aaPredicted RBP1.3□□□□□ -2.2
HIF1A-204ENST00000539097 PDCP20941 246 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 MGAT1P26572 445 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 BMPR1AP36894 532 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 ADCY8P40145 1251 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 HK3P52790 923 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 EPHB3P54753 998 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 ZNF200P98182 395 aaPredicted RBP1.3□□□□□ -2.2
HIF1A-204ENST00000539097 TARDBPQ13148 414 aaKnown RBP eCLIP1.3□□□□□ -2.2
HIF1A-204ENST00000539097 SHBQ15464 509 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 UGT8Q16880 541 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 LONRF1Q17RB8 773 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 UAP1L1Q3KQV9 507 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 MUM1L1Q5H9M0 696 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 NPNTQ6UXI9 565 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 USP45Q70EL2 814 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 PNMA8AQ86V59 439 aaPredicted RBP1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms