RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	RAD51AP2	Q09MP3	1159 aa		13.47	□□□□□ -0.25
CLTCL1-205	ENST00000538828	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.47	□□□□□ -0.25
CLTCL1-205	ENST00000538828	USP41	Q3LFD5	358 aa		13.47	□□□□□ -0.25
CLTCL1-205	ENST00000538828	KIAA0319	Q5VV43	1072 aa		13.47	□□□□□ -0.25
CLTCL1-205	ENST00000538828	ANKRD54	Q6NXT1	300 aa		13.47	□□□□□ -0.25
CLTCL1-205	ENST00000538828	FUT10	Q6P4F1	479 aa		13.47	□□□□□ -0.25
CLTCL1-205	ENST00000538828	CYP26C1	Q6V0L0	522 aa		13.47	□□□□□ -0.25
CLTCL1-205	ENST00000538828	MAP4K3	Q8IVH8	894 aa		13.47	□□□□□ -0.25
CLTCL1-205	ENST00000538828	ADHFE1	Q8IWW8	467 aa		13.47	□□□□□ -0.25
CLTCL1-205	ENST00000538828	SUSD6	Q92537	303 aa		13.47	□□□□□ -0.25
CLTCL1-205	ENST00000538828	DDX12P	Q92771	950 aa		13.47	□□□□□ -0.25
CLTCL1-205	ENST00000538828	DNAJC19	Q96DA6	116 aa		13.47	□□□□□ -0.25
CLTCL1-205	ENST00000538828	TCHP	Q9BT92	498 aa		13.47	□□□□□ -0.25
CLTCL1-205	ENST00000538828	S1PR5	Q9H228	398 aa		13.47	□□□□□ -0.25
CLTCL1-205	ENST00000538828	TNMD	Q9H2S6	317 aa		13.47	□□□□□ -0.25
CLTCL1-205	ENST00000538828	KBTBD4	Q9NVX7	518 aa		13.47	□□□□□ -0.25
CLTCL1-205	ENST00000538828	CNTN3	Q9P232	1028 aa		13.47	□□□□□ -0.25
CLTCL1-205	ENST00000538828	RCOR1	Q9UKL0	485 aa		13.47	□□□□□ -0.25
CLTCL1-205	ENST00000538828	TBX20	Q9UMR3	447 aa		13.47	□□□□□ -0.25
CLTCL1-205	ENST00000538828	PCDHGC5	Q9Y5F6	944 aa		13.47	□□□□□ -0.25
CLTCL1-205	ENST00000538828	ATP6V1D	Q9Y5K8	247 aa		13.47	□□□□□ -0.25
CLTCL1-205	ENST00000538828	HCFC2	Q9Y5Z7	792 aa		13.47	□□□□□ -0.25
CLTCL1-205	ENST00000538828	SMIM28	A0A1B0GU29	152 aa		13.46	□□□□□ -0.25
CLTCL1-205	ENST00000538828	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.46	□□□□□ -0.25
CLTCL1-205	ENST00000538828	PPP1R37	O75864	691 aa		13.46	□□□□□ -0.25
CLTCL1-205	ENST00000538828	CLTA	P09496	248 aa		13.46	□□□□□ -0.25
CLTCL1-205	ENST00000538828	IL9	P15248	144 aa		13.46	□□□□□ -0.25
CLTCL1-205	ENST00000538828	PAX3	P23760	479 aa		13.46	□□□□□ -0.25
CLTCL1-205	ENST00000538828	RPL9	P32969	192 aa	Known RBP	13.46	□□□□□ -0.25
CLTCL1-205	ENST00000538828	STAT6	P42226	847 aa		13.46	□□□□□ -0.25
CLTCL1-205	ENST00000538828	GLUD2	P49448	558 aa		13.46	□□□□□ -0.25
CLTCL1-205	ENST00000538828	AMPD3	Q01432	767 aa		13.46	□□□□□ -0.25
CLTCL1-205	ENST00000538828	BECN1	Q14457	450 aa		13.46	□□□□□ -0.25
CLTCL1-205	ENST00000538828	SPECC1	Q5M775	1068 aa		13.46	□□□□□ -0.25
CLTCL1-205	ENST00000538828	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.46	□□□□□ -0.25
CLTCL1-205	ENST00000538828	SLFN12L	Q6IEE8	588 aa		13.46	□□□□□ -0.25
CLTCL1-205	ENST00000538828	ELMSAN1	Q6PJG2	1045 aa		13.46	□□□□□ -0.25
CLTCL1-205	ENST00000538828	DCLRE1A	Q6PJP8	1040 aa		13.46	□□□□□ -0.25
CLTCL1-205	ENST00000538828	EP400NL	Q6ZTU2	488 aa		13.46	□□□□□ -0.25
CLTCL1-205	ENST00000538828	ZNF720	Q7Z2F6	126 aa		13.46	□□□□□ -0.25
CLTCL1-205	ENST00000538828	CD302	Q8IX05	232 aa		13.46	□□□□□ -0.25
CLTCL1-205	ENST00000538828	IQUB	Q8NA54	791 aa		13.46	□□□□□ -0.25
CLTCL1-205	ENST00000538828	TMEM87A	Q8NBN3	555 aa		13.46	□□□□□ -0.25
CLTCL1-205	ENST00000538828	VN1R2	Q8NFZ6	395 aa		13.46	□□□□□ -0.25
CLTCL1-205	ENST00000538828	SLC22A17	Q8WUG5	538 aa		13.46	□□□□□ -0.25
CLTCL1-205	ENST00000538828	SNX27	Q96L92	541 aa		13.46	□□□□□ -0.25
CLTCL1-205	ENST00000538828	NECTIN4	Q96NY8	510 aa		13.46	□□□□□ -0.25
CLTCL1-205	ENST00000538828	STRA6	Q9BX79	667 aa		13.46	□□□□□ -0.25
CLTCL1-205	ENST00000538828	KLK14	Q9P0G3	267 aa		13.46	□□□□□ -0.25
CLTCL1-205	ENST00000538828	GDA	Q9Y2T3	454 aa		13.46	□□□□□ -0.25
CLTCL1-205	ENST00000538828	PRG3	Q9Y2Y8	225 aa	Predicted RBP	13.46	□□□□□ -0.25
CLTCL1-205	ENST00000538828	STYXL1	Q9Y6J8	313 aa		13.46	□□□□□ -0.25
CLTCL1-205	ENST00000538828	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.45	□□□□□ -0.26
CLTCL1-205	ENST00000538828		K7ENM7	598 aa		13.45	□□□□□ -0.26
CLTCL1-205	ENST00000538828	TRAPPC3	O43617	180 aa		13.45	□□□□□ -0.26
CLTCL1-205	ENST00000538828	TADA2A	O75478	443 aa		13.45	□□□□□ -0.26
CLTCL1-205	ENST00000538828	ADH1A	P07327	375 aa		13.45	□□□□□ -0.26
CLTCL1-205	ENST00000538828	LIG4	P49917	911 aa		13.45	□□□□□ -0.26
CLTCL1-205	ENST00000538828	ZP2	Q05996	745 aa		13.45	□□□□□ -0.26
CLTCL1-205	ENST00000538828	DHX8	Q14562	1220 aa	Known RBP	13.45	□□□□□ -0.26
CLTCL1-205	ENST00000538828	CBX2	Q14781	532 aa	Predicted RBP	13.45	□□□□□ -0.26
CLTCL1-205	ENST00000538828	POSTN	Q15063	836 aa		13.45	□□□□□ -0.26
CLTCL1-205	ENST00000538828	E2F4	Q16254	413 aa		13.45	□□□□□ -0.26
CLTCL1-205	ENST00000538828	SYCE2	Q6PIF2	218 aa		13.45	□□□□□ -0.26
CLTCL1-205	ENST00000538828	RTL10	Q7L3V2	364 aa		13.45	□□□□□ -0.26
CLTCL1-205	ENST00000538828	GJD3	Q8N144	294 aa		13.45	□□□□□ -0.26
CLTCL1-205	ENST00000538828	CMAS	Q8NFW8	434 aa	Predicted RBP	13.45	□□□□□ -0.26
CLTCL1-205	ENST00000538828	KLHL5	Q96PQ7	755 aa		13.45	□□□□□ -0.26
CLTCL1-205	ENST00000538828	TFIP11	Q9UBB9	837 aa	Known RBP	13.45	□□□□□ -0.26
CLTCL1-205	ENST00000538828	BARX2	Q9UMQ3	279 aa	Predicted RBP	13.45	□□□□□ -0.26
CLTCL1-205	ENST00000538828	USP20	Q9Y2K6	914 aa		13.45	□□□□□ -0.26
CLTCL1-205	ENST00000538828		A0A0B4J269	797 aa		13.44	□□□□□ -0.26
CLTCL1-205	ENST00000538828	TTC26	A0AVF1	554 aa		13.44	□□□□□ -0.26
CLTCL1-205	ENST00000538828	MYMK	A6NI61	221 aa		13.44	□□□□□ -0.26
CLTCL1-205	ENST00000538828	HNRNPDL	O14979	420 aa	Known RBP	13.44	□□□□□ -0.26
CLTCL1-205	ENST00000538828	OGT	O15294	1046 aa		13.44	□□□□□ -0.26
CLTCL1-205	ENST00000538828	CNP	P09543	421 aa	Known RBP	13.44	□□□□□ -0.26
CLTCL1-205	ENST00000538828	CYP3A5	P20815	502 aa		13.44	□□□□□ -0.26
CLTCL1-205	ENST00000538828	CLCN4	P51793	760 aa		13.44	□□□□□ -0.26
CLTCL1-205	ENST00000538828	CACNB1	Q02641	598 aa	Predicted RBP	13.44	□□□□□ -0.26
CLTCL1-205	ENST00000538828	UPP1	Q16831	310 aa		13.44	□□□□□ -0.26
CLTCL1-205	ENST00000538828	KIAA1841	Q6NSI8	718 aa		13.44	□□□□□ -0.26
CLTCL1-205	ENST00000538828	CES5A	Q6NT32	575 aa		13.44	□□□□□ -0.26
CLTCL1-205	ENST00000538828	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.44	□□□□□ -0.26
CLTCL1-205	ENST00000538828	C15orf39	Q6ZRI6	1047 aa		13.44	□□□□□ -0.26
CLTCL1-205	ENST00000538828	CEP120	Q8N960	986 aa		13.44	□□□□□ -0.26
CLTCL1-205	ENST00000538828	PIK3R5	Q8WYR1	880 aa		13.44	□□□□□ -0.26
CLTCL1-205	ENST00000538828	PHF7	Q9BWX1	381 aa	Predicted RBP	13.44	□□□□□ -0.26
CLTCL1-205	ENST00000538828	GPR62	Q9BZJ7	368 aa		13.44	□□□□□ -0.26
CLTCL1-205	ENST00000538828	ADAM7	Q9H2U9	754 aa		13.44	□□□□□ -0.26
CLTCL1-205	ENST00000538828	PLEKHA4	Q9H4M7	779 aa		13.44	□□□□□ -0.26
CLTCL1-205	ENST00000538828	EXOC7	Q9UPT5	735 aa		13.44	□□□□□ -0.26
CLTCL1-205	ENST00000538828	USP15	Q9Y4E8	981 aa	Predicted RBP	13.44	□□□□□ -0.26
CLTCL1-205	ENST00000538828	PCDHB13	Q9Y5F0	798 aa		13.44	□□□□□ -0.26
CLTCL1-205	ENST00000538828	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.44	□□□□□ -0.26
CLTCL1-205	ENST00000538828	PDCD11	Q14690	1871 aa	Known RBP	13.44	□□□□□ -0.26
CLTCL1-205	ENST00000538828		A0A087X0B3	334 aa		13.43	□□□□□ -0.26
CLTCL1-205	ENST00000538828	XPOT	O43592	962 aa	Known RBP	13.43	□□□□□ -0.26
CLTCL1-205	ENST00000538828	FAM189A1	O60320	539 aa		13.43	□□□□□ -0.26
CLTCL1-205	ENST00000538828	CSPG5	O95196	566 aa		13.43	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms