RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 C1orf54Q8WWF1 131 aa10.49□□□□□ -0.73
COL4A6-208ENST00000538570 RFFLQ8WZ73 363 aa10.49□□□□□ -0.73
COL4A6-208ENST00000538570 PRMT1Q99873 361 aaKnown RBP10.49□□□□□ -0.73
COL4A6-208ENST00000538570 DHX35Q9H5Z1 703 aaKnown RBP10.49□□□□□ -0.73
COL4A6-208ENST00000538570 ZNF302Q9NR11 478 aa10.49□□□□□ -0.73
COL4A6-208ENST00000538570 BSDC1Q9NW68 430 aaPredicted RBP10.49□□□□□ -0.73
COL4A6-208ENST00000538570 ZNF197O14709 1029 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 ANGPT2O15123 496 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 ZNF746Q6NUN9 644 aaPredicted RBP10.48□□□□□ -0.73
COL4A6-208ENST00000538570 TTC30AQ86WT1 665 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 ABHD8Q96I13 439 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 GID8Q9NWU2 228 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 AIPL1Q9NZN9 384 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 FARP1Q9Y4F1 1045 aaPredicted RBP10.48□□□□□ -0.73
COL4A6-208ENST00000538570 ABCB11O95342 1321 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 NEDD4P46934 1319 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 TMEM191CA6NGB0 347 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 FOXP2O15409 715 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 WDR47O94967 919 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 ASNSP08243 561 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 SFNP31947 248 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 HIF1AQ16665 826 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 DCAF4L1Q3SXM0 396 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 FAM102AQ5T9C2 384 aaPredicted RBP10.48□□□□□ -0.73
COL4A6-208ENST00000538570 SYDE1Q6ZW31 735 aaPredicted RBP10.48□□□□□ -0.73
COL4A6-208ENST00000538570 AGR3Q8TD06 166 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 OTULINQ96BN8 352 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 PSD3Q9NYI0 1048 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 ARL2BPQ9Y2Y0 163 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 PPP1R37O75864 691 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 GH2P01242 217 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 ENO1P06733 434 aaKnown RBP10.48□□□□□ -0.73
COL4A6-208ENST00000538570 FAM196AQ6ZSG2 479 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 HIC2Q96JB3 615 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 TRIM62Q9BVG3 475 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 KLHL25Q9H0H3 589 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 MAD2L2Q9UI95 211 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 GGT7Q9UJ14 662 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 ITGB1BP2Q9UKP3 347 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 POTECB2RU33 542 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 TCP11X1B4DZS4 312 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 FGFR4P22455 802 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 MDH1P40925 334 aaKnown RBP10.48□□□□□ -0.73
COL4A6-208ENST00000538570 SLC9A5Q14940 896 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 MTHFD1LQ6UB35 978 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 ANKS3Q6ZW76 656 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 MRPL4Q9BYD3 311 aaKnown RBP10.48□□□□□ -0.73
COL4A6-208ENST00000538570 NPHP4O75161 1426 aaPredicted RBP10.48□□□□□ -0.73
COL4A6-208ENST00000538570 ATP1A1P05023 1023 aaKnown RBP10.48□□□□□ -0.73
COL4A6-208ENST00000538570 VCAM1P19320 739 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 RAB14P61106 215 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 ANO4Q32M45 955 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 CEP78Q5JTW2 689 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 RABGAP1LQ5R372 815 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 HDDC2Q7Z4H3 204 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 PPHLN1Q8NEY8 458 aaKnown RBP10.48□□□□□ -0.73
COL4A6-208ENST00000538570 CCT8L2Q96SF2 557 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 FBXO40Q9UH90 709 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 WDR19Q8NEZ3 1342 aa10.48□□□□□ -0.73
COL4A6-208ENST00000538570 C16orf96A6NNT2 1141 aa10.47□□□□□ -0.73
COL4A6-208ENST00000538570 UBTFL6P0CB48 400 aaPredicted RBP10.47□□□□□ -0.73
COL4A6-208ENST00000538570 HSPA1AP0DMV8 641 aaKnown RBP10.47□□□□□ -0.73
COL4A6-208ENST00000538570 HSPA1BP0DMV9 641 aaKnown RBP10.47□□□□□ -0.73
COL4A6-208ENST00000538570 PLIN5Q00G26 463 aa10.47□□□□□ -0.73
COL4A6-208ENST00000538570 CDH24Q86UP0 819 aa10.47□□□□□ -0.73
COL4A6-208ENST00000538570 RHPN2Q8IUC4 686 aa10.47□□□□□ -0.73
COL4A6-208ENST00000538570 PLD3Q8IV08 490 aa10.47□□□□□ -0.73
COL4A6-208ENST00000538570 ST13P5Q8NFI4 369 aaPredicted RBP10.47□□□□□ -0.73
COL4A6-208ENST00000538570 SH3TC2Q8TF17 1288 aa10.47□□□□□ -0.73
COL4A6-208ENST00000538570 TRABDQ9H4I3 376 aa10.47□□□□□ -0.73
COL4A6-208ENST00000538570 TTC26A0AVF1 554 aa10.47□□□□□ -0.73
COL4A6-208ENST00000538570 PRAMEF22A3QJZ6 481 aa10.47□□□□□ -0.73
COL4A6-208ENST00000538570 P4HBP07237 508 aaKnown RBP10.47□□□□□ -0.73
COL4A6-208ENST00000538570 CDH2P19022 906 aaPredicted RBP10.47□□□□□ -0.73
COL4A6-208ENST00000538570 ADORA2BP29275 332 aa10.47□□□□□ -0.73
COL4A6-208ENST00000538570 CDH6P55285 790 aa10.47□□□□□ -0.73
COL4A6-208ENST00000538570 SF3B3Q15393 1217 aaKnown RBP10.47□□□□□ -0.73
COL4A6-208ENST00000538570 THEMIS2Q5TEJ8 643 aa10.47□□□□□ -0.73
COL4A6-208ENST00000538570 PODNQ7Z5L7 613 aa10.47□□□□□ -0.73
COL4A6-208ENST00000538570 DHX40Q8IX18 779 aaKnown RBP10.47□□□□□ -0.73
COL4A6-208ENST00000538570 DFFAO00273 331 aa10.47□□□□□ -0.73
COL4A6-208ENST00000538570 DPYSL4O14531 572 aa10.47□□□□□ -0.73
COL4A6-208ENST00000538570 AGTP01019 485 aa10.47□□□□□ -0.73
COL4A6-208ENST00000538570 SLC1A1P43005 524 aa10.47□□□□□ -0.73
COL4A6-208ENST00000538570 MCAMP43121 646 aa10.47□□□□□ -0.73
COL4A6-208ENST00000538570 AP3M2P53677 418 aa10.47□□□□□ -0.73
COL4A6-208ENST00000538570 TBC1D10CQ8IV04 446 aa10.47□□□□□ -0.73
COL4A6-208ENST00000538570 APLFQ8IW19 511 aaPredicted RBP10.47□□□□□ -0.73
COL4A6-208ENST00000538570 ARHGEF1Q92888 912 aaKnown RBP10.47□□□□□ -0.73
COL4A6-208ENST00000538570 PHF21AQ96BD5 680 aa10.47□□□□□ -0.73
COL4A6-208ENST00000538570 OLFML3Q9NRN5 406 aa10.47□□□□□ -0.73
COL4A6-208ENST00000538570 SMG5Q9UPR3 1016 aaKnown RBP10.47□□□□□ -0.73
COL4A6-208ENST00000538570 A0A1W2PQC6 194 aa10.47□□□□□ -0.73
COL4A6-208ENST00000538570 H0YC42 278 aa10.47□□□□□ -0.73
COL4A6-208ENST00000538570 EIF3EP60228 445 aaKnown RBP10.47□□□□□ -0.73
COL4A6-208ENST00000538570 SMAD1Q15797 465 aaKnown RBP10.47□□□□□ -0.73
COL4A6-208ENST00000538570 DNAL1Q4LDG9 190 aa10.47□□□□□ -0.73
COL4A6-208ENST00000538570 BTNL9Q6UXG8 535 aa10.47□□□□□ -0.73
COL4A6-208ENST00000538570 HORMAD1Q86X24 394 aa10.47□□□□□ -0.73
COL4A6-208ENST00000538570 GPD1LQ8N335 351 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms