RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 RNF208Q9H0X6 261 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 ASCC2Q9H1I8 757 aaPredicted RBP5.68□□□□□ -1.5
LRP6-203ENST00000538239 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.68□□□□□ -1.5
LRP6-203ENST00000538239 PACSIN2Q9UNF0 486 aaPredicted RBP5.68□□□□□ -1.5
LRP6-203ENST00000538239 TAF6LQ9Y6J9 622 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 IGSF9BQ9UPX0 1349 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 KIAA0391O15091 583 aaKnown RBP5.68□□□□□ -1.5
LRP6-203ENST00000538239 EXTL3O43909 919 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 SEC31AO94979 1220 aaKnown RBP5.68□□□□□ -1.5
LRP6-203ENST00000538239 SUPT20HL2P0C7V6 817 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 RAG1P15918 1043 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 DSG3P32926 999 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 TDRD10Q5VZ19 366 aaKnown RBP5.68□□□□□ -1.5
LRP6-203ENST00000538239 TRIM72Q6ZMU5 477 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 SLC7A14Q8TBB6 771 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 EPAS1Q99814 870 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 SENP6Q9GZR1 1112 aaPredicted RBP5.68□□□□□ -1.5
LRP6-203ENST00000538239 GPRC5CQ9NQ84 441 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 SETD4Q9NVD3 440 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 LCMT1Q9UIC8 334 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 VWDEQ8N2E2 1590 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 SLC16A3O15427 465 aaKnown RBP5.68□□□□□ -1.5
LRP6-203ENST00000538239 BAG2O95816 211 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 KRT7P08729 469 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 SKIP12755 728 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 NUMBP49757 651 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 MMP14P50281 582 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 ORC1Q13415 861 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 ARID5BQ14865 1188 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 CCDC157Q569K6 752 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 ZNF484Q5JVG2 852 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 RICTORQ6R327 1708 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 VCX3BQ9H321 246 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 IGFLR1Q9H665 355 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 DDX56Q9NY93 547 aaKnown RBP5.68□□□□□ -1.5
LRP6-203ENST00000538239 TAC1P20366 129 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 BCAR1P56945 870 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 TMCO4Q5TGY1 634 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 RNF135Q8IUD6 432 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 TTC13Q8NBP0 860 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 RBBP8NLQ8NC74 664 aaPredicted RBP5.68□□□□□ -1.5
LRP6-203ENST00000538239 SNX19Q92543 992 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 HPDLQ96IR7 371 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 P2RX7Q99572 595 aaKnown RBP5.68□□□□□ -1.5
LRP6-203ENST00000538239 TRIM9Q9C026 710 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 XPNPEP3Q9NQH7 507 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 NAGPAQ9UK23 515 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 ADGRB1O14514 1584 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 PRR23AA6NEV1 266 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 TBKBP1A7MCY6 615 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 TEX33O43247 280 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 ATP9BO43861 1147 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 SYF2O95926 243 aaKnown RBP5.68□□□□□ -1.5
LRP6-203ENST00000538239 HLA-DRAP01903 254 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 PRAMEP78395 509 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 RBBP7Q16576 425 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 DEFB115Q30KQ5 88 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 C10orf67Q8IYJ2 551 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 C18orf8Q96DM3 657 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 MED15Q96RN5 788 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 EGFL8Q99944 293 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 MTG1Q9BT17 334 aaPredicted RBP5.68□□□□□ -1.5
LRP6-203ENST00000538239 HMX1Q9NP08 348 aaPredicted RBP5.68□□□□□ -1.5
LRP6-203ENST00000538239 INTS9Q9NV88 658 aaKnown RBP5.68□□□□□ -1.5
LRP6-203ENST00000538239 DEPDC5O75140 1603 aa5.68□□□□□ -1.5
LRP6-203ENST00000538239 IQANK1A0A1B0GTG1 560 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 CFAP69A5D8W1 941 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 SART1O43290 800 aaKnown RBP5.67□□□□□ -1.5
LRP6-203ENST00000538239 KLRC1P26715 233 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 PCK1P35558 622 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 HSD17B4P51659 736 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 FAM83AQ86UY5 434 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 VPS39Q96JC1 886 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 MCEEQ96PE7 176 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 NT5C1AQ9BXI3 368 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 MAGEB5Q9BZ81 275 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 LRRC4BQ9NT99 713 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 SLIT1O75093 1534 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 H7C4K7 107 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 CHEK2O96017 543 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 NCF2P19878 526 aaPredicted RBP5.67□□□□□ -1.5
LRP6-203ENST00000538239 FGFR2P21802 821 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 ETFBP38117 255 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 TAF6P49848 677 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 ARL4CP56559 192 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 TTC31Q49AM3 519 aaPredicted RBP5.67□□□□□ -1.5
LRP6-203ENST00000538239 DACT2Q5SW24 774 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 THEMIS2Q5TEJ8 643 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 ITPRIPL1Q6GPH6 555 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 TTC23LQ6PF05 361 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 PID1Q7Z2X4 250 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 CDKL3Q8IVW4 592 aaPredicted RBP5.67□□□□□ -1.5
LRP6-203ENST00000538239 DNAJB3Q8WWF6 145 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 C7orf25Q9BPX7 421 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 RUSC1Q9BVN2 902 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 TRPV6Q9H1D0 765 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 KCND2Q9NZV8 630 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 C3P01024 1663 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 CASTOR2A6NHX0 329 aa5.67□□□□□ -1.5
LRP6-203ENST00000538239 A6NNZ2 444 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms