RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 RPF1Q9H9Y2 349 aaKnown RBP12.71□□□□□ -0.37
SPARC-207ENST00000537849 ERVK-5Q9HDB9 667 aa12.71□□□□□ -0.37
SPARC-207ENST00000537849 MFAP3LO75121 409 aa12.7□□□□□ -0.38
SPARC-207ENST00000537849 KRT9P35527 623 aa12.7□□□□□ -0.38
SPARC-207ENST00000537849 ZBED6P86452 979 aa12.7□□□□□ -0.38
SPARC-207ENST00000537849 MYL7Q01449 175 aa12.7□□□□□ -0.38
SPARC-207ENST00000537849 DSC3Q14574 896 aa12.7□□□□□ -0.38
SPARC-207ENST00000537849 MBTPS1Q14703 1052 aa12.7□□□□□ -0.38
SPARC-207ENST00000537849 ZACNQ401N2 412 aa12.7□□□□□ -0.38
SPARC-207ENST00000537849 LMBRD2Q68DH5 695 aaPredicted RBP12.7□□□□□ -0.38
SPARC-207ENST00000537849 KRT39Q6A163 491 aa12.7□□□□□ -0.38
SPARC-207ENST00000537849 SCARA3Q6AZY7 606 aa12.7□□□□□ -0.38
SPARC-207ENST00000537849 ALKAL1Q6UXT8 129 aa12.7□□□□□ -0.38
SPARC-207ENST00000537849 ANKRD33Q7Z3H0 272 aa12.7□□□□□ -0.38
SPARC-207ENST00000537849 ANKLE1Q8NAG6 615 aa12.7□□□□□ -0.38
SPARC-207ENST00000537849 CCDC150Q8NCX0 1101 aa12.7□□□□□ -0.38
SPARC-207ENST00000537849 OR5B17Q8NGF7 314 aa12.7□□□□□ -0.38
SPARC-207ENST00000537849 BAP1Q92560 729 aa12.7□□□□□ -0.38
SPARC-207ENST00000537849 ACAP3Q96P50 834 aa12.7□□□□□ -0.38
SPARC-207ENST00000537849 PANX2Q96RD6 677 aa12.7□□□□□ -0.38
SPARC-207ENST00000537849 FNBP1Q96RU3 617 aa12.7□□□□□ -0.38
SPARC-207ENST00000537849 ADPGKQ9BRR6 497 aa12.7□□□□□ -0.38
SPARC-207ENST00000537849 NAA15Q9BXJ9 866 aaKnown RBP12.7□□□□□ -0.38
SPARC-207ENST00000537849 INTS2Q9H0H0 1204 aaKnown RBP12.7□□□□□ -0.38
SPARC-207ENST00000537849 PRDM10Q9NQV6 1147 aa12.7□□□□□ -0.38
SPARC-207ENST00000537849 CHST12Q9NRB3 414 aa12.7□□□□□ -0.38
SPARC-207ENST00000537849 FAM207AQ9NSI2 230 aaPredicted RBP12.7□□□□□ -0.38
SPARC-207ENST00000537849 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.7□□□□□ -0.38
SPARC-207ENST00000537849 PADI3Q9ULW8 664 aa12.7□□□□□ -0.38
SPARC-207ENST00000537849 LUC7L2Q9Y383 392 aaKnown RBP12.7□□□□□ -0.38
SPARC-207ENST00000537849 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.7□□□□□ -0.38
SPARC-207ENST00000537849 MROH7Q68CQ1 1323 aa12.69□□□□□ -0.38
SPARC-207ENST00000537849 GPR182O15218 404 aa12.69□□□□□ -0.38
SPARC-207ENST00000537849 IL18RAPO95256 599 aa12.69□□□□□ -0.38
SPARC-207ENST00000537849 VNN1O95497 513 aa12.69□□□□□ -0.38
SPARC-207ENST00000537849 CXCL8P10145 99 aa12.69□□□□□ -0.38
SPARC-207ENST00000537849 CAPN2P17655 700 aa12.69□□□□□ -0.38
SPARC-207ENST00000537849 TNNI1P19237 187 aa12.69□□□□□ -0.38
SPARC-207ENST00000537849 TRIM21P19474 475 aaKnown RBP12.69□□□□□ -0.38
SPARC-207ENST00000537849 FECHP22830 423 aa12.69□□□□□ -0.38
SPARC-207ENST00000537849 CD52P31358 61 aa12.69□□□□□ -0.38
SPARC-207ENST00000537849 MXI1P50539 228 aa12.69□□□□□ -0.38
SPARC-207ENST00000537849 AP3M2P53677 418 aa12.69□□□□□ -0.38
SPARC-207ENST00000537849 ATN1P54259 1190 aaPredicted RBP12.69□□□□□ -0.38
SPARC-207ENST00000537849 CCZ1BP86790 482 aa12.69□□□□□ -0.38
SPARC-207ENST00000537849 CCZ1P86791 482 aaPredicted RBP12.69□□□□□ -0.38
SPARC-207ENST00000537849 NFX1Q12986 1120 aaKnown RBP12.69□□□□□ -0.38
SPARC-207ENST00000537849 GPNMBQ14956 572 aa12.69□□□□□ -0.38
SPARC-207ENST00000537849 C1orf53Q5VUE5 145 aa12.69□□□□□ -0.38
SPARC-207ENST00000537849 PHLDB3Q6NSJ2 640 aa12.69□□□□□ -0.38
SPARC-207ENST00000537849 TRIM65Q6PJ69 517 aa12.69□□□□□ -0.38
SPARC-207ENST00000537849 APBB1IPQ7Z5R6 666 aaPredicted RBP12.69□□□□□ -0.38
SPARC-207ENST00000537849 TMEM139Q8IV31 216 aa12.69□□□□□ -0.38
SPARC-207ENST00000537849 USP38Q8NB14 1042 aa12.69□□□□□ -0.38
SPARC-207ENST00000537849 SMG8Q8ND04 991 aaKnown RBP12.69□□□□□ -0.38
SPARC-207ENST00000537849 TET1Q8NFU7 2136 aa12.69□□□□□ -0.38
SPARC-207ENST00000537849 OR8K1Q8NGG5 319 aa12.69□□□□□ -0.38
SPARC-207ENST00000537849 CAGE1Q8TC20 777 aa12.69□□□□□ -0.38
SPARC-207ENST00000537849 DIS3LQ8TF46 1054 aaKnown RBP12.69□□□□□ -0.38
SPARC-207ENST00000537849 TRIM44Q96DX7 344 aaPredicted RBP12.69□□□□□ -0.38
SPARC-207ENST00000537849 DNAJC7Q99615 494 aa12.69□□□□□ -0.38
SPARC-207ENST00000537849 CXCL16Q9H2A7 254 aa12.69□□□□□ -0.38
SPARC-207ENST00000537849 RNF39Q9H2S5 420 aa12.69□□□□□ -0.38
SPARC-207ENST00000537849 ASB7Q9H672 318 aa12.69□□□□□ -0.38
SPARC-207ENST00000537849 SNTG2Q9NY99 539 aa12.69□□□□□ -0.38
SPARC-207ENST00000537849 GCNT4Q9P109 453 aa12.69□□□□□ -0.38
SPARC-207ENST00000537849 CEP72Q9P209 647 aa12.69□□□□□ -0.38
SPARC-207ENST00000537849 FBXL5Q9UKA1 691 aa12.69□□□□□ -0.38
SPARC-207ENST00000537849 PIN4Q9Y237 131 aaKnown RBP12.69□□□□□ -0.38
SPARC-207ENST00000537849 MGEA5O60502 916 aa12.68□□□□□ -0.38
SPARC-207ENST00000537849 CST3P01034 146 aaPredicted RBP12.68□□□□□ -0.38
SPARC-207ENST00000537849 TPM1P09493 284 aa12.68□□□□□ -0.38
SPARC-207ENST00000537849 GHRP10912 638 aa12.68□□□□□ -0.38
SPARC-207ENST00000537849 UCHL3P15374 230 aa12.68□□□□□ -0.38
SPARC-207ENST00000537849 HNRNPH3P31942 346 aaKnown RBP12.68□□□□□ -0.38
SPARC-207ENST00000537849 POLR2FP61218 127 aaKnown RBP12.68□□□□□ -0.38
SPARC-207ENST00000537849 TLE2Q04725 743 aa12.68□□□□□ -0.38
SPARC-207ENST00000537849 FAAP100Q0VG06 881 aa12.68□□□□□ -0.38
SPARC-207ENST00000537849 CETN1Q12798 172 aa12.68□□□□□ -0.38
SPARC-207ENST00000537849 DUOXA2Q1HG44 320 aa12.68□□□□□ -0.38
SPARC-207ENST00000537849 TDRD10Q5VZ19 366 aaKnown RBP12.68□□□□□ -0.38
SPARC-207ENST00000537849 GJB7Q6PEY0 223 aa12.68□□□□□ -0.38
SPARC-207ENST00000537849 WDR59Q6PJI9 974 aa12.68□□□□□ -0.38
SPARC-207ENST00000537849 TRAPPC11Q7Z392 1133 aa12.68□□□□□ -0.38
SPARC-207ENST00000537849 MRPL10Q7Z7H8 261 aaKnown RBP12.68□□□□□ -0.38
SPARC-207ENST00000537849 RTN4RL1Q86UN2 441 aaPredicted RBP12.68□□□□□ -0.38
SPARC-207ENST00000537849 WDR49Q8IV35 697 aa12.68□□□□□ -0.38
SPARC-207ENST00000537849 CNGA4Q8IV77 575 aa12.68□□□□□ -0.38
SPARC-207ENST00000537849 EFCAB13Q8IY85 973 aa12.68□□□□□ -0.38
SPARC-207ENST00000537849 FBXL13Q8NEE6 735 aa12.68□□□□□ -0.38
SPARC-207ENST00000537849 TAS1R2Q8TE23 839 aa12.68□□□□□ -0.38
SPARC-207ENST00000537849 FAM212AQ96EL1 285 aa12.68□□□□□ -0.38
SPARC-207ENST00000537849 TOX2Q96NM4 488 aa12.68□□□□□ -0.38
SPARC-207ENST00000537849 CCDC94Q9BW85 323 aaPredicted RBP12.68□□□□□ -0.38
SPARC-207ENST00000537849 PLEKHA5Q9HAU0 1116 aa12.68□□□□□ -0.38
SPARC-207ENST00000537849 NLRC4Q9NPP4 1024 aa12.68□□□□□ -0.38
SPARC-207ENST00000537849 RAB20Q9NX57 234 aa12.68□□□□□ -0.38
SPARC-207ENST00000537849 AJAP1Q9UKB5 411 aaPredicted RBP12.68□□□□□ -0.38
SPARC-207ENST00000537849 HES2Q9Y543 173 aa12.68□□□□□ -0.38
SPARC-207ENST00000537849 BRCA2P51587 3418 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms