RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 CDYL2Q8N8U2 506 aa7.31□□□□□ -1.24
CLIP1-207ENST00000536634 ANKRD53Q8N9V6 530 aa7.31□□□□□ -1.24
CLIP1-207ENST00000536634 PLA2G15Q8NCC3 412 aa7.31□□□□□ -1.24
CLIP1-207ENST00000536634 RABGGTAQ92696 567 aa7.31□□□□□ -1.24
CLIP1-207ENST00000536634 LPPQ93052 612 aa7.31□□□□□ -1.24
CLIP1-207ENST00000536634 HIST1H2AHQ96KK5 128 aa7.31□□□□□ -1.24
CLIP1-207ENST00000536634 RPL10LQ96L21 214 aaKnown RBP7.31□□□□□ -1.24
CLIP1-207ENST00000536634 GPHA2Q96T91 129 aa7.31□□□□□ -1.24
CLIP1-207ENST00000536634 HIST1H2AJQ99878 128 aa7.31□□□□□ -1.24
CLIP1-207ENST00000536634 FDXACB1Q9BRP7 624 aaPredicted RBP7.31□□□□□ -1.24
CLIP1-207ENST00000536634 DEF6Q9H4E7 631 aa7.31□□□□□ -1.24
CLIP1-207ENST00000536634 VTA1Q9NP79 307 aa7.31□□□□□ -1.24
CLIP1-207ENST00000536634 AATKQ6ZMQ8 1374 aa7.31□□□□□ -1.24
CLIP1-207ENST00000536634 COL24A1Q17RW2 1714 aa7.3□□□□□ -1.24
CLIP1-207ENST00000536634 TUBGCP6Q96RT7 1819 aa7.3□□□□□ -1.24
CLIP1-207ENST00000536634 MAFGO15525 162 aa7.3□□□□□ -1.24
CLIP1-207ENST00000536634 ULK1O75385 1050 aa7.3□□□□□ -1.24
CLIP1-207ENST00000536634 TOX4O94842 621 aa7.3□□□□□ -1.24
CLIP1-207ENST00000536634 GCP02774 474 aa7.3□□□□□ -1.24
CLIP1-207ENST00000536634 SELENOPP49908 381 aa7.3□□□□□ -1.24
CLIP1-207ENST00000536634 TMPRSS15P98073 1019 aa7.3□□□□□ -1.24
CLIP1-207ENST00000536634 FOXL1Q12952 345 aa7.3□□□□□ -1.24
CLIP1-207ENST00000536634 PITRM1Q5JRX3 1037 aa7.3□□□□□ -1.24
CLIP1-207ENST00000536634 GAREM2Q75VX8 874 aa7.3□□□□□ -1.24
CLIP1-207ENST00000536634 PALM2Q8IXS6 379 aa7.3□□□□□ -1.24
CLIP1-207ENST00000536634 CMIPQ8IY22 773 aa7.3□□□□□ -1.24
CLIP1-207ENST00000536634 PPP1R14CQ8TAE6 165 aa7.3□□□□□ -1.24
CLIP1-207ENST00000536634 TMEM176AQ96HP8 235 aa7.3□□□□□ -1.24
CLIP1-207ENST00000536634 OSBPL6Q9BZF3 934 aa7.3□□□□□ -1.24
CLIP1-207ENST00000536634 NHSQ6T4R5 1651 aa7.3□□□□□ -1.24
CLIP1-207ENST00000536634 RGPD5Q99666 1765 aa7.3□□□□□ -1.24
CLIP1-207ENST00000536634 SLIT3O75094 1523 aa7.29□□□□□ -1.24
CLIP1-207ENST00000536634 PMS2P1A4D2B8 440 aa7.29□□□□□ -1.24
CLIP1-207ENST00000536634 BRINP1O60477 761 aa7.29□□□□□ -1.24
CLIP1-207ENST00000536634 LPLP06858 475 aa7.29□□□□□ -1.24
CLIP1-207ENST00000536634 GAAP10253 952 aa7.29□□□□□ -1.24
CLIP1-207ENST00000536634 MSX2P35548 267 aaPredicted RBP7.29□□□□□ -1.24
CLIP1-207ENST00000536634 RPS19P39019 145 aaKnown RBP7.29□□□□□ -1.24
CLIP1-207ENST00000536634 CD69Q07108 199 aa7.29□□□□□ -1.24
CLIP1-207ENST00000536634 PPARAQ07869 468 aa7.29□□□□□ -1.24
CLIP1-207ENST00000536634 CT83Q5H943 113 aa7.29□□□□□ -1.24
CLIP1-207ENST00000536634 ZNF662Q6ZS27 426 aa7.29□□□□□ -1.24
CLIP1-207ENST00000536634 Q6ZSN1 163 aa7.29□□□□□ -1.24
CLIP1-207ENST00000536634 ADGRE4PQ86SQ3 457 aa7.29□□□□□ -1.24
CLIP1-207ENST00000536634 SLC41A1Q8IVJ1 513 aa7.29□□□□□ -1.24
CLIP1-207ENST00000536634 PIK3C3Q8NEB9 887 aa7.29□□□□□ -1.24
CLIP1-207ENST00000536634 GAB3Q8WWW8 586 aa7.29□□□□□ -1.24
CLIP1-207ENST00000536634 CDK19Q9BWU1 502 aa7.29□□□□□ -1.24
CLIP1-207ENST00000536634 PLA2G3Q9NZ20 509 aa7.29□□□□□ -1.24
CLIP1-207ENST00000536634 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.29□□□□□ -1.24
CLIP1-207ENST00000536634 TCAF1Q9Y4C2 921 aa7.29□□□□□ -1.24
CLIP1-207ENST00000536634 NUMBLQ9Y6R0 609 aa7.29□□□□□ -1.24
CLIP1-207ENST00000536634 SBNO2Q9Y2G9 1366 aa7.29□□□□□ -1.24
CLIP1-207ENST00000536634 BTAF1O14981 1849 aa7.29□□□□□ -1.24
CLIP1-207ENST00000536634 PIK3C2AO00443 1686 aa7.28□□□□□ -1.24
CLIP1-207ENST00000536634 SEC24DO94855 1032 aaPredicted RBP7.28□□□□□ -1.24
CLIP1-207ENST00000536634 VSIG10L2P0DP72 767 aa7.28□□□□□ -1.24
CLIP1-207ENST00000536634 COMTP21964 271 aa7.28□□□□□ -1.24
CLIP1-207ENST00000536634 GRM7Q14831 915 aa7.28□□□□□ -1.24
CLIP1-207ENST00000536634 TOM1L2Q6ZVM7 507 aa7.28□□□□□ -1.24
CLIP1-207ENST00000536634 POLNQ7Z5Q5 900 aa7.28□□□□□ -1.24
CLIP1-207ENST00000536634 EAF2Q96CJ1 260 aaPredicted RBP7.28□□□□□ -1.24
CLIP1-207ENST00000536634 GPR20Q99678 358 aa7.28□□□□□ -1.24
CLIP1-207ENST00000536634 NELFAQ9H3P2 528 aa7.28□□□□□ -1.24
CLIP1-207ENST00000536634 MSL2Q9HCI7 577 aa7.28□□□□□ -1.24
CLIP1-207ENST00000536634 EVLQ9UI08 416 aaPredicted RBP7.28□□□□□ -1.24
CLIP1-207ENST00000536634 PRSS50Q9UI38 385 aa7.28□□□□□ -1.24
CLIP1-207ENST00000536634 ATP10DQ9P241 1426 aa7.27□□□□□ -1.24
CLIP1-207ENST00000536634 QSER1Q2KHR3 1735 aa7.27□□□□□ -1.25
CLIP1-207ENST00000536634 A0A1W2PRX2 142 aa7.27□□□□□ -1.25
CLIP1-207ENST00000536634 GOLGA8BA8MQT2 603 aa7.27□□□□□ -1.25
CLIP1-207ENST00000536634 GPR39O43194 453 aa7.27□□□□□ -1.25
CLIP1-207ENST00000536634 DAPK3O43293 454 aa7.27□□□□□ -1.25
CLIP1-207ENST00000536634 FSBPO95073 299 aa7.27□□□□□ -1.25
CLIP1-207ENST00000536634 LY86O95711 162 aa7.27□□□□□ -1.25
CLIP1-207ENST00000536634 ACO1P21399 889 aaKnown RBP7.27□□□□□ -1.25
CLIP1-207ENST00000536634 COG1Q8WTW3 980 aa7.27□□□□□ -1.25
CLIP1-207ENST00000536634 ADOQ96SZ5 270 aa7.27□□□□□ -1.25
CLIP1-207ENST00000536634 WNT8AQ9H1J5 351 aa7.27□□□□□ -1.25
CLIP1-207ENST00000536634 KCTD10Q9H3F6 313 aa7.27□□□□□ -1.25
CLIP1-207ENST00000536634 EDARQ9UNE0 448 aa7.27□□□□□ -1.25
CLIP1-207ENST00000536634 TSC22D4Q9Y3Q8 395 aa7.27□□□□□ -1.25
CLIP1-207ENST00000536634 TNS2Q63HR2 1409 aa7.27□□□□□ -1.25
CLIP1-207ENST00000536634 WDR17Q8IZU2 1322 aa7.27□□□□□ -1.25
CLIP1-207ENST00000536634 KAT6BQ8WYB5 2073 aa7.26□□□□□ -1.25
CLIP1-207ENST00000536634 UBE2QL1A1L167 161 aa7.26□□□□□ -1.25
CLIP1-207ENST00000536634 DNAJC6O75061 913 aa7.26□□□□□ -1.25
CLIP1-207ENST00000536634 PRKD3O94806 890 aa7.26□□□□□ -1.25
CLIP1-207ENST00000536634 INSRRP14616 1297 aa7.26□□□□□ -1.25
CLIP1-207ENST00000536634 HSPA6P17066 643 aa7.26□□□□□ -1.25
CLIP1-207ENST00000536634 KIR2DL3P43628 341 aa7.26□□□□□ -1.25
CLIP1-207ENST00000536634 FSCN1Q16658 493 aaKnown RBP7.26□□□□□ -1.25
CLIP1-207ENST00000536634 MAN2A1Q16706 1144 aa7.26□□□□□ -1.25
CLIP1-207ENST00000536634 GAGE13Q4V321 117 aa7.26□□□□□ -1.25
CLIP1-207ENST00000536634 HS1BP3Q53T59 392 aa7.26□□□□□ -1.25
CLIP1-207ENST00000536634 KRT40Q6A162 431 aa7.26□□□□□ -1.25
CLIP1-207ENST00000536634 IQSEC1Q6DN90 963 aa7.26□□□□□ -1.25
CLIP1-207ENST00000536634 GGNQ86UU5 652 aa7.26□□□□□ -1.25
CLIP1-207ENST00000536634 UNC5BQ8IZJ1 945 aa7.26□□□□□ -1.25
CLIP1-207ENST00000536634 ZNF808Q8N4W9 903 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms