RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 CHORDC1Q9UHD1 332 aaPredicted RBP13.34□□□□□ -0.27
SPG11-203ENST00000535302 KRT37O76014 449 aa13.34□□□□□ -0.27
SPG11-203ENST00000535302 NNMTP40261 264 aa13.34□□□□□ -0.27
SPG11-203ENST00000535302 CDH6P55285 790 aa13.34□□□□□ -0.27
SPG11-203ENST00000535302 PLEKHM3Q6ZWE6 761 aa13.34□□□□□ -0.27
SPG11-203ENST00000535302 BZW1Q7L1Q6 419 aaKnown RBP13.34□□□□□ -0.27
SPG11-203ENST00000535302 YAF2Q8IY57 180 aa13.34□□□□□ -0.27
SPG11-203ENST00000535302 DPF2Q92785 391 aa13.34□□□□□ -0.27
SPG11-203ENST00000535302 TEX12Q9BXU0 123 aa13.34□□□□□ -0.27
SPG11-203ENST00000535302 PCYT1AP49585 367 aa13.34□□□□□ -0.27
SPG11-203ENST00000535302 SLC16A1P53985 500 aa13.34□□□□□ -0.27
SPG11-203ENST00000535302 R3HDM1Q15032 1099 aaKnown RBP13.34□□□□□ -0.27
SPG11-203ENST00000535302 ATP11CQ8NB49 1132 aa13.34□□□□□ -0.27
SPG11-203ENST00000535302 MBD5Q9P267 1494 aa13.34□□□□□ -0.27
SPG11-203ENST00000535302 TMCC1O94876 653 aa13.34□□□□□ -0.27
SPG11-203ENST00000535302 PNMA6AP0CW24 399 aaPredicted RBP13.34□□□□□ -0.27
SPG11-203ENST00000535302 RARBP10826 455 aa13.34□□□□□ -0.27
SPG11-203ENST00000535302 MLH1P40692 756 aa13.34□□□□□ -0.27
SPG11-203ENST00000535302 MRPS15P82914 257 aaKnown RBP13.34□□□□□ -0.27
SPG11-203ENST00000535302 PKN3Q6P5Z2 889 aa13.34□□□□□ -0.27
SPG11-203ENST00000535302 APOBEC3FQ8IUX4 373 aaKnown RBP13.34□□□□□ -0.27
SPG11-203ENST00000535302 DGKIO75912 1065 aa13.33□□□□□ -0.27
SPG11-203ENST00000535302 CHRNA3P32297 505 aa13.33□□□□□ -0.27
SPG11-203ENST00000535302 USE1Q9NZ43 259 aa13.33□□□□□ -0.27
SPG11-203ENST00000535302 SYNGAP1Q96PV0 1343 aa13.33□□□□□ -0.28
SPG11-203ENST00000535302 BTBD8Q5XKL5 378 aa13.33□□□□□ -0.28
SPG11-203ENST00000535302 SMARCAL1Q9NZC9 954 aa13.33□□□□□ -0.28
SPG11-203ENST00000535302 RNF14Q9UBS8 474 aa13.33□□□□□ -0.28
SPG11-203ENST00000535302 ARHGAP10A1A4S6 786 aa13.33□□□□□ -0.28
SPG11-203ENST00000535302 CTIFO43310 598 aaKnown RBP13.33□□□□□ -0.28
SPG11-203ENST00000535302 KDSRQ06136 332 aa13.33□□□□□ -0.28
SPG11-203ENST00000535302 HAUS6Q7Z4H7 955 aa13.33□□□□□ -0.28
SPG11-203ENST00000535302 WDR75Q8IWA0 830 aaKnown RBP13.33□□□□□ -0.28
SPG11-203ENST00000535302 GEMIN8Q9NWZ8 242 aaKnown RBP13.33□□□□□ -0.28
SPG11-203ENST00000535302 MARCOQ9UEW3 520 aaPredicted RBP13.33□□□□□ -0.28
SPG11-203ENST00000535302 KDM1AO60341 852 aa13.33□□□□□ -0.28
SPG11-203ENST00000535302 GYS1P13807 737 aa13.33□□□□□ -0.28
SPG11-203ENST00000535302 MFSD14CQ5VZR4 134 aa13.33□□□□□ -0.28
SPG11-203ENST00000535302 CYGBQ8WWM9 190 aa13.33□□□□□ -0.28
SPG11-203ENST00000535302 PRKCBP05771 671 aa13.33□□□□□ -0.28
SPG11-203ENST00000535302 EFHC2Q5JST6 749 aa13.33□□□□□ -0.28
SPG11-203ENST00000535302 KRT39Q6A163 491 aa13.33□□□□□ -0.28
SPG11-203ENST00000535302 PATL1Q86TB9 770 aaKnown RBP13.33□□□□□ -0.28
SPG11-203ENST00000535302 HS6ST3Q8IZP7 471 aa13.33□□□□□ -0.28
SPG11-203ENST00000535302 FAM20AQ96MK3 541 aa13.33□□□□□ -0.28
SPG11-203ENST00000535302 MYO3BQ8WXR4 1341 aa13.33□□□□□ -0.28
SPG11-203ENST00000535302 CCDC137Q6PK04 289 aaKnown RBP13.32□□□□□ -0.28
SPG11-203ENST00000535302 PGBD4Q96DM1 585 aa13.32□□□□□ -0.28
SPG11-203ENST00000535302 SENP2Q9HC62 589 aa13.32□□□□□ -0.28
SPG11-203ENST00000535302 IP6K2Q9UHH9 426 aa13.32□□□□□ -0.28
SPG11-203ENST00000535302 ZC3H4Q9UPT8 1303 aaKnown RBP13.32□□□□□ -0.28
SPG11-203ENST00000535302 DYNC1LI2O43237 492 aaPredicted RBP13.32□□□□□ -0.28
SPG11-203ENST00000535302 RAET1EQ8TD07 263 aa13.32□□□□□ -0.28
SPG11-203ENST00000535302 ASPSCR1Q9BZE9 553 aa13.32□□□□□ -0.28
SPG11-203ENST00000535302 STK36Q9NRP7 1315 aa13.32□□□□□ -0.28
SPG11-203ENST00000535302 TNPO2O14787 897 aaKnown RBP13.32□□□□□ -0.28
SPG11-203ENST00000535302 ZNF263O14978 683 aa13.32□□□□□ -0.28
SPG11-203ENST00000535302 BTKQ06187 659 aa13.32□□□□□ -0.28
SPG11-203ENST00000535302 CLMNQ96JQ2 1002 aa13.32□□□□□ -0.28
SPG11-203ENST00000535302 TGS1Q96RS0 853 aaKnown RBP13.32□□□□□ -0.28
SPG11-203ENST00000535302 OSBPL10Q9BXB5 764 aa13.32□□□□□ -0.28
SPG11-203ENST00000535302 JPH1Q9HDC5 661 aaPredicted RBP13.32□□□□□ -0.28
SPG11-203ENST00000535302 TRIM10Q9UDY6 481 aa13.32□□□□□ -0.28
SPG11-203ENST00000535302 HMGB1P1B2RPK0 211 aaPredicted RBP13.32□□□□□ -0.28
SPG11-203ENST00000535302 PODXLO00592 558 aa13.32□□□□□ -0.28
SPG11-203ENST00000535302 KLK7P49862 253 aa13.32□□□□□ -0.28
SPG11-203ENST00000535302 SESN2P58004 480 aaPredicted RBP13.32□□□□□ -0.28
SPG11-203ENST00000535302 MRPL28Q13084 256 aaKnown RBP13.32□□□□□ -0.28
SPG11-203ENST00000535302 BAATQ14032 418 aaPredicted RBP13.32□□□□□ -0.28
SPG11-203ENST00000535302 CHMP1BQ7LBR1 199 aa13.32□□□□□ -0.28
SPG11-203ENST00000535302 IFNEQ86WN2 208 aa13.32□□□□□ -0.28
SPG11-203ENST00000535302 MIER2Q8N344 545 aa13.32□□□□□ -0.28
SPG11-203ENST00000535302 TBC1D16Q8TBP0 767 aa13.32□□□□□ -0.28
SPG11-203ENST00000535302 ATMINO43313 823 aaPredicted RBP13.32□□□□□ -0.28
SPG11-203ENST00000535302 BCAR1P56945 870 aa13.32□□□□□ -0.28
SPG11-203ENST00000535302 WDR72Q3MJ13 1102 aa13.32□□□□□ -0.28
SPG11-203ENST00000535302 ZC2HC1CQ53FD0 456 aaPredicted RBP13.32□□□□□ -0.28
SPG11-203ENST00000535302 ATG9AQ7Z3C6 839 aa13.32□□□□□ -0.28
SPG11-203ENST00000535302 AGAP1Q9UPQ3 857 aa13.32□□□□□ -0.28
SPG11-203ENST00000535302 CCDC151A5D8V7 595 aa13.32□□□□□ -0.28
SPG11-203ENST00000535302 RSPH10B2B2RC85 870 aa13.32□□□□□ -0.28
SPG11-203ENST00000535302 C2CD2LO14523 706 aa13.32□□□□□ -0.28
SPG11-203ENST00000535302 RSPH10BP0C881 870 aa13.32□□□□□ -0.28
SPG11-203ENST00000535302 CYP2B6P20813 491 aa13.32□□□□□ -0.28
SPG11-203ENST00000535302 SOAT1P35610 550 aa13.32□□□□□ -0.28
SPG11-203ENST00000535302 ARL4DP49703 201 aa13.32□□□□□ -0.28
SPG11-203ENST00000535302 ARSEP51690 589 aa13.32□□□□□ -0.28
SPG11-203ENST00000535302 PID1Q7Z2X4 250 aa13.32□□□□□ -0.28
SPG11-203ENST00000535302 ASCC2Q9H1I8 757 aaPredicted RBP13.32□□□□□ -0.28
SPG11-203ENST00000535302 CNOT7Q9UIV1 285 aaKnown RBP13.32□□□□□ -0.28
SPG11-203ENST00000535302 SFNP31947 248 aa13.31□□□□□ -0.28
SPG11-203ENST00000535302 KRT72Q14CN4 511 aa13.31□□□□□ -0.28
SPG11-203ENST00000535302 GALNT4Q8N4A0 578 aa13.31□□□□□ -0.28
SPG11-203ENST00000535302 ACAP3Q96P50 834 aa13.31□□□□□ -0.28
SPG11-203ENST00000535302 OSBPL1AQ9BXW6 950 aa13.31□□□□□ -0.28
SPG11-203ENST00000535302 ALFQ53S48 1182 aa13.31□□□□□ -0.28
SPG11-203ENST00000535302 CCDC33Q8N5R6 958 aa13.31□□□□□ -0.28
SPG11-203ENST00000535302 SLC25A41Q8N5S1 370 aa13.31□□□□□ -0.28
SPG11-203ENST00000535302 GTF2A1LQ9UNN4 478 aa13.31□□□□□ -0.28
SPG11-203ENST00000535302 KCNN4O15554 427 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms