RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 CNTD1Q8N815 330 aa4.71□□□□□ -1.66
USP48-215ENST00000534705 GLB1L3Q8NCI6 653 aaPredicted RBP4.71□□□□□ -1.66
USP48-215ENST00000534705 FATE1Q969F0 183 aa4.71□□□□□ -1.66
USP48-215ENST00000534705 IFT122Q9HBG6 1241 aa4.71□□□□□ -1.66
USP48-215ENST00000534705 ZNF277Q9NRM2 450 aaPredicted RBP4.71□□□□□ -1.66
USP48-215ENST00000534705 EDARQ9UNE0 448 aa4.71□□□□□ -1.66
USP48-215ENST00000534705 FZD1Q9UP38 647 aa4.71□□□□□ -1.66
USP48-215ENST00000534705 LRRIQ1Q96JM4 1722 aa4.71□□□□□ -1.66
USP48-215ENST00000534705 RPTORQ8N122 1335 aa4.71□□□□□ -1.66
USP48-215ENST00000534705 HOXA3O43365 443 aaPredicted RBP4.7□□□□□ -1.66
USP48-215ENST00000534705 MFAP3LO75121 409 aa4.7□□□□□ -1.66
USP48-215ENST00000534705 GZMKP49863 264 aa4.7□□□□□ -1.66
USP48-215ENST00000534705 RABGGTBP53611 331 aa4.7□□□□□ -1.66
USP48-215ENST00000534705 SRSF2Q01130 221 aaKnown RBP4.7□□□□□ -1.66
USP48-215ENST00000534705 RABL3Q5HYI8 236 aa4.7□□□□□ -1.66
USP48-215ENST00000534705 EPHA10Q5JZY3 1008 aa4.7□□□□□ -1.66
USP48-215ENST00000534705 FAM180AQ6UWF9 173 aa4.7□□□□□ -1.66
USP48-215ENST00000534705 RHOUQ7L0Q8 258 aa4.7□□□□□ -1.66
USP48-215ENST00000534705 VRK3Q8IV63 474 aa4.7□□□□□ -1.66
USP48-215ENST00000534705 CMIPQ8IY22 773 aa4.7□□□□□ -1.66
USP48-215ENST00000534705 ZNF276Q8N554 614 aa4.7□□□□□ -1.66
USP48-215ENST00000534705 TGFBRAP1Q8WUH2 860 aa4.7□□□□□ -1.66
USP48-215ENST00000534705 ST8SIA2Q92186 375 aa4.7□□□□□ -1.66
USP48-215ENST00000534705 GPR87Q9BY21 358 aa4.7□□□□□ -1.66
USP48-215ENST00000534705 ACE2Q9BYF1 805 aaPredicted RBP4.7□□□□□ -1.66
USP48-215ENST00000534705 TOR3AQ9H497 397 aa4.7□□□□□ -1.66
USP48-215ENST00000534705 GREM2Q9H772 168 aa4.7□□□□□ -1.66
USP48-215ENST00000534705 DNAJC28Q9NX36 388 aa4.7□□□□□ -1.66
USP48-215ENST00000534705 GPRC5DQ9NZD1 345 aa4.7□□□□□ -1.66
USP48-215ENST00000534705 NCDNQ9UBB6 729 aa4.7□□□□□ -1.66
USP48-215ENST00000534705 CLCA2Q9UQC9 943 aa4.7□□□□□ -1.66
USP48-215ENST00000534705 COL4A3BPQ9Y5P4 624 aa4.7□□□□□ -1.66
USP48-215ENST00000534705 GPR45Q9Y5Y3 372 aa4.7□□□□□ -1.66
USP48-215ENST00000534705 ZCCHC11Q5TAX3 1644 aaKnown RBP4.7□□□□□ -1.66
USP48-215ENST00000534705 DIP2BQ9P265 1576 aa4.7□□□□□ -1.66
USP48-215ENST00000534705 MAPKBP1O60336 1514 aa4.69□□□□□ -1.66
USP48-215ENST00000534705 GOLGA6L6A8MZA4 724 aa4.69□□□□□ -1.66
USP48-215ENST00000534705 CFBP00751 764 aa4.69□□□□□ -1.66
USP48-215ENST00000534705 ITGB1P05556 798 aa4.69□□□□□ -1.66
USP48-215ENST00000534705 ZNF37AP17032 561 aaPredicted RBP4.69□□□□□ -1.66
USP48-215ENST00000534705 GNAT2P19087 354 aa4.69□□□□□ -1.66
USP48-215ENST00000534705 CASRP41180 1078 aa4.69□□□□□ -1.66
USP48-215ENST00000534705 CDKN1CP49918 316 aaPredicted RBP4.69□□□□□ -1.66
USP48-215ENST00000534705 TAP1Q03518 808 aa4.69□□□□□ -1.66
USP48-215ENST00000534705 MALLQ13021 153 aa4.69□□□□□ -1.66
USP48-215ENST00000534705 MUM1L1Q5H9M0 696 aa4.69□□□□□ -1.66
USP48-215ENST00000534705 TOR2AQ5JU69 321 aa4.69□□□□□ -1.66
USP48-215ENST00000534705 SYDE2Q5VT97 1194 aa4.69□□□□□ -1.66
USP48-215ENST00000534705 ABHD15Q6UXT9 468 aa4.69□□□□□ -1.66
USP48-215ENST00000534705 PDZD4Q76G19 769 aaPredicted RBP4.69□□□□□ -1.66
USP48-215ENST00000534705 AMOTL1Q8IY63 956 aa4.69□□□□□ -1.66
USP48-215ENST00000534705 CBARPQ8N350 705 aaPredicted RBP4.69□□□□□ -1.66
USP48-215ENST00000534705 LILRA3Q8N6C8 439 aaPredicted RBP4.69□□□□□ -1.66
USP48-215ENST00000534705 PRPF38AQ8NAV1 312 aaKnown RBP4.69□□□□□ -1.66
USP48-215ENST00000534705 GPR156Q8NFN8 814 aa4.69□□□□□ -1.66
USP48-215ENST00000534705 OR5M3Q8NGP4 307 aa4.69□□□□□ -1.66
USP48-215ENST00000534705 PROKR1Q8TCW9 393 aa4.69□□□□□ -1.66
USP48-215ENST00000534705 PCDH12Q9NPG4 1184 aa4.69□□□□□ -1.66
USP48-215ENST00000534705 LOC105371045A0A1W2PR82 267 aa4.68□□□□□ -1.66
USP48-215ENST00000534705 KLRG2A4D1S0 409 aaPredicted RBP4.68□□□□□ -1.66
USP48-215ENST00000534705 B5MCH6 92 aa4.68□□□□□ -1.66
USP48-215ENST00000534705 B3GALT2O43825 422 aa4.68□□□□□ -1.66
USP48-215ENST00000534705 FAM20BO75063 409 aa4.68□□□□□ -1.66
USP48-215ENST00000534705 ITGA10O75578 1167 aa4.68□□□□□ -1.66
USP48-215ENST00000534705 ABHD16AO95870 558 aa4.68□□□□□ -1.66
USP48-215ENST00000534705 AGXTP21549 392 aa4.68□□□□□ -1.66
USP48-215ENST00000534705 MCAMP43121 646 aa4.68□□□□□ -1.66
USP48-215ENST00000534705 GUCY2FP51841 1108 aa4.68□□□□□ -1.66
USP48-215ENST00000534705 CDK17Q00537 523 aa4.68□□□□□ -1.66
USP48-215ENST00000534705 C1QL3Q5VWW1 255 aa4.68□□□□□ -1.66
USP48-215ENST00000534705 KCNV1Q6PIU1 500 aa4.68□□□□□ -1.66
USP48-215ENST00000534705 FAM83AQ86UY5 434 aa4.68□□□□□ -1.66
USP48-215ENST00000534705 OR52N2Q8NGI0 321 aa4.68□□□□□ -1.66
USP48-215ENST00000534705 HOXB13Q92826 284 aaPredicted RBP4.68□□□□□ -1.66
USP48-215ENST00000534705 CDC5LQ99459 802 aaKnown RBP4.68□□□□□ -1.66
USP48-215ENST00000534705 BCO1Q9HAY6 547 aa4.68□□□□□ -1.66
USP48-215ENST00000534705 RBM12Q9NTZ6 932 aaKnown RBP4.68□□□□□ -1.66
USP48-215ENST00000534705 TRPS1Q9UHF7 1281 aa4.68□□□□□ -1.66
USP48-215ENST00000534705 ZBTB21Q9ULJ3 1066 aa4.68□□□□□ -1.66
USP48-215ENST00000534705 COX11Q9Y6N1 276 aa4.68□□□□□ -1.66
USP48-215ENST00000534705 EEA1Q15075 1411 aa4.68□□□□□ -1.66
USP48-215ENST00000534705 ABCA8O94911 1581 aa4.68□□□□□ -1.66
USP48-215ENST00000534705 ABCC2Q92887 1545 aa4.67□□□□□ -1.66
USP48-215ENST00000534705 FAM171A2A8MVW0 826 aa4.67□□□□□ -1.66
USP48-215ENST00000534705 STC2O76061 302 aa4.67□□□□□ -1.66
USP48-215ENST00000534705 ENDOD1O94919 500 aa4.67□□□□□ -1.66
USP48-215ENST00000534705 HSP90B1P14625 803 aaKnown RBP4.67□□□□□ -1.66
USP48-215ENST00000534705 ECHS1P30084 290 aa4.67□□□□□ -1.66
USP48-215ENST00000534705 WASP42768 502 aa4.67□□□□□ -1.66
USP48-215ENST00000534705 FLT3LGP49771 235 aa4.67□□□□□ -1.66
USP48-215ENST00000534705 MGAT2Q10469 447 aa4.67□□□□□ -1.66
USP48-215ENST00000534705 PTPROQ16827 1216 aa4.67□□□□□ -1.66
USP48-215ENST00000534705 FAM214AQ32MH5 1076 aa4.67□□□□□ -1.66
USP48-215ENST00000534705 HECTD2Q5U5R9 776 aa4.67□□□□□ -1.66
USP48-215ENST00000534705 PAPD7Q5XG87 772 aaKnown RBP4.67□□□□□ -1.66
USP48-215ENST00000534705 DRICH1Q6PGQ1 229 aaPredicted RBP4.67□□□□□ -1.66
USP48-215ENST00000534705 OLFML1Q6UWY5 402 aa4.67□□□□□ -1.66
USP48-215ENST00000534705 GPRIN1Q7Z2K8 1008 aa4.67□□□□□ -1.66
USP48-215ENST00000534705 ELOA2Q8IYF1 753 aaPredicted RBP4.67□□□□□ -1.66
USP48-215ENST00000534705 OR7D4Q8NG98 312 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms