RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 AMPD3Q01432 767 aa23.35■■□□□ 1.33
PKP3-211ENST00000534401 DLX2Q07687 328 aaPredicted RBP23.35■■□□□ 1.33
PKP3-211ENST00000534401 EHHADHQ08426 723 aa23.35■■□□□ 1.33
PKP3-211ENST00000534401 SLC10A6Q3KNW5 377 aa23.35■■□□□ 1.33
PKP3-211ENST00000534401 PLPP4Q5VZY2 271 aa23.35■■□□□ 1.33
PKP3-211ENST00000534401 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.35■■□□□ 1.33
PKP3-211ENST00000534401 STAMQ92783 540 aa23.35■■□□□ 1.33
PKP3-211ENST00000534401 MSLNLQ96KJ4 702 aa23.35■■□□□ 1.33
PKP3-211ENST00000534401 ENTPD7Q9NQZ7 604 aa23.35■■□□□ 1.33
PKP3-211ENST00000534401 TOPORSQ9NS56 1045 aaPredicted RBP23.35■■□□□ 1.33
PKP3-211ENST00000534401 CHST7Q9NS84 486 aa23.35■■□□□ 1.33
PKP3-211ENST00000534401 PANK4Q9NVE7 773 aa23.35■■□□□ 1.33
PKP3-211ENST00000534401 TCF20Q9UGU0 1960 aaKnown RBP23.34■■□□□ 1.33
PKP3-211ENST00000534401 VCANP13611 3396 aa23.34■■□□□ 1.33
PKP3-211ENST00000534401 F8W810 466 aa23.34■■□□□ 1.33
PKP3-211ENST00000534401 TBX10O75333 385 aa23.34■■□□□ 1.33
PKP3-211ENST00000534401 NR1I2O75469 434 aa23.34■■□□□ 1.33
PKP3-211ENST00000534401 CXCL14O95715 111 aa23.34■■□□□ 1.33
PKP3-211ENST00000534401 SOD2P04179 222 aa23.34■■□□□ 1.33
PKP3-211ENST00000534401 KCNA5P22460 613 aa23.34■■□□□ 1.33
PKP3-211ENST00000534401 LIG4P49917 911 aa23.34■■□□□ 1.33
PKP3-211ENST00000534401 ALCAMQ13740 583 aa23.34■■□□□ 1.33
PKP3-211ENST00000534401 HERC4Q5GLZ8 1057 aaPredicted RBP23.34■■□□□ 1.33
PKP3-211ENST00000534401 VN1R2Q8NFZ6 395 aa23.34■■□□□ 1.33
PKP3-211ENST00000534401 ZMAT2Q96NC0 199 aaKnown RBP23.34■■□□□ 1.33
PKP3-211ENST00000534401 PAAF1Q9BRP4 392 aa23.34■■□□□ 1.33
PKP3-211ENST00000534401 HERC2P3Q9BVR0 1158 aa23.34■■□□□ 1.33
PKP3-211ENST00000534401 CLDND1Q9NY35 253 aa23.34■■□□□ 1.33
PKP3-211ENST00000534401 CLEC1BQ9P126 229 aa23.34■■□□□ 1.33
PKP3-211ENST00000534401 PRG3Q9Y2Y8 225 aaPredicted RBP23.34■■□□□ 1.33
PKP3-211ENST00000534401 A0A1W2PQ27 194 aa23.33■■□□□ 1.33
PKP3-211ENST00000534401 A0A1W2PQ64 194 aa23.33■■□□□ 1.33
PKP3-211ENST00000534401 A0A1W2PQD8 194 aa23.33■■□□□ 1.33
PKP3-211ENST00000534401 TTC26A0AVF1 554 aa23.33■■□□□ 1.33
PKP3-211ENST00000534401 ANKRD63C9JTQ0 380 aa23.33■■□□□ 1.33
PKP3-211ENST00000534401 TMEM189-UBE2V1I3L0A0 370 aa23.33■■□□□ 1.33
PKP3-211ENST00000534401 HNRNPDLO14979 420 aaKnown RBP23.33■■□□□ 1.33
PKP3-211ENST00000534401 OGTO15294 1046 aa23.33■■□□□ 1.33
PKP3-211ENST00000534401 ACTN4O43707 911 aaKnown RBP23.33■■□□□ 1.33
PKP3-211ENST00000534401 CLTAP09496 248 aa23.33■■□□□ 1.33
PKP3-211ENST00000534401 SLFN14P0C7P3 912 aa23.33■■□□□ 1.33
PKP3-211ENST00000534401 KCNQ1P51787 676 aa23.33■■□□□ 1.33
PKP3-211ENST00000534401 YARSP54577 528 aaKnown RBP23.33■■□□□ 1.33
PKP3-211ENST00000534401 PTPN14Q15678 1187 aa23.33■■□□□ 1.33
PKP3-211ENST00000534401 KYAT1Q16773 422 aa23.33■■□□□ 1.33
PKP3-211ENST00000534401 KIAA0319Q5VV43 1072 aa23.33■■□□□ 1.33
PKP3-211ENST00000534401 RBM23Q86U06 439 aaKnown RBP23.33■■□□□ 1.33
PKP3-211ENST00000534401 CCDC65Q8IXS2 484 aa23.33■■□□□ 1.33
PKP3-211ENST00000534401 IGFLR1Q9H665 355 aa23.33■■□□□ 1.33
PKP3-211ENST00000534401 MRPL44Q9H9J2 332 aaKnown RBP23.33■■□□□ 1.33
PKP3-211ENST00000534401 PLEKHA5Q9HAU0 1116 aa23.33■■□□□ 1.33
PKP3-211ENST00000534401 ANKFY1Q9P2R3 1169 aa23.33■■□□□ 1.33
PKP3-211ENST00000534401 ADAM28Q9UKQ2 775 aa23.33■■□□□ 1.33
PKP3-211ENST00000534401 PER2O15055 1255 aa23.32■■□□□ 1.32
PKP3-211ENST00000534401 CSPG5O95196 566 aa23.32■■□□□ 1.32
PKP3-211ENST00000534401 IDEP14735 1019 aa23.32■■□□□ 1.32
PKP3-211ENST00000534401 CASP5P51878 434 aa23.32■■□□□ 1.32
PKP3-211ENST00000534401 OSTNP61366 133 aa23.32■■□□□ 1.32
PKP3-211ENST00000534401 POU5F1Q01860 360 aaKnown RBP23.32■■□□□ 1.32
PKP3-211ENST00000534401 COASYQ13057 564 aa23.32■■□□□ 1.32
PKP3-211ENST00000534401 HSP90AA2PQ14568 343 aaPredicted RBP23.32■■□□□ 1.32
PKP3-211ENST00000534401 BMS1Q14692 1282 aaKnown RBP23.32■■□□□ 1.32
PKP3-211ENST00000534401 PUS10Q3MIT2 529 aaKnown RBP23.32■■□□□ 1.32
PKP3-211ENST00000534401 L1TD1Q5T7N2 865 aaKnown RBP23.32■■□□□ 1.32
PKP3-211ENST00000534401 CD300LGQ6UXG3 332 aa23.32■■□□□ 1.32
PKP3-211ENST00000534401 TAS1R1Q7RTX1 841 aa23.32■■□□□ 1.32
PKP3-211ENST00000534401 BICD1Q96G01 975 aa23.32■■□□□ 1.32
PKP3-211ENST00000534401 FGFBP2Q9BYJ0 223 aa23.32■■□□□ 1.32
PKP3-211ENST00000534401 GPR62Q9BZJ7 368 aa23.32■■□□□ 1.32
PKP3-211ENST00000534401 USP25Q9UHP3 1055 aa23.32■■□□□ 1.32
PKP3-211ENST00000534401 PCDHB13Q9Y5F0 798 aa23.32■■□□□ 1.32
PKP3-211ENST00000534401 ANK1P16157 1881 aa23.31■■□□□ 1.32
PKP3-211ENST00000534401 GRXCR2A6NFK2 248 aa23.31■■□□□ 1.32
PKP3-211ENST00000534401 CLASP2O75122 1294 aaKnown RBP23.31■■□□□ 1.32
PKP3-211ENST00000534401 PFKFB1P16118 471 aa23.31■■□□□ 1.32
PKP3-211ENST00000534401 DSG1Q02413 1049 aa23.31■■□□□ 1.32
PKP3-211ENST00000534401 SOX4Q06945 474 aaPredicted RBP23.31■■□□□ 1.32
PKP3-211ENST00000534401 KCNA1Q09470 495 aa23.31■■□□□ 1.32
PKP3-211ENST00000534401 ZBTB6Q15916 424 aa23.31■■□□□ 1.32
PKP3-211ENST00000534401 SLFN12LQ6IEE8 588 aa23.31■■□□□ 1.32
PKP3-211ENST00000534401 FUT10Q6P4F1 479 aa23.31■■□□□ 1.32
PKP3-211ENST00000534401 UROC1Q96N76 676 aa23.31■■□□□ 1.32
PKP3-211ENST00000534401 TSPAN18Q96SJ8 248 aa23.31■■□□□ 1.32
PKP3-211ENST00000534401 RXFP1Q9HBX9 757 aa23.31■■□□□ 1.32
PKP3-211ENST00000534401 CACNG4Q9UBN1 327 aa23.31■■□□□ 1.32
PKP3-211ENST00000534401 CPSF3Q9UKF6 684 aaKnown RBP23.31■■□□□ 1.32
PKP3-211ENST00000534401 BDP1A6H8Y1 2624 aa23.3■■□□□ 1.32
PKP3-211ENST00000534401 A0A1B0GVL5 298 aa23.3■■□□□ 1.32
PKP3-211ENST00000534401 PVALEFA0A1B0GWK0 134 aa23.3■■□□□ 1.32
PKP3-211ENST00000534401 ADSSP30520 456 aa23.3■■□□□ 1.32
PKP3-211ENST00000534401 UPP1Q16831 310 aa23.3■■□□□ 1.32
PKP3-211ENST00000534401 SEZ6Q53EL9 994 aa23.3■■□□□ 1.32
PKP3-211ENST00000534401 GLRA4Q5JXX5 417 aa23.3■■□□□ 1.32
PKP3-211ENST00000534401 DCLRE1AQ6PJP8 1040 aa23.3■■□□□ 1.32
PKP3-211ENST00000534401 UNC13DQ70J99 1090 aa23.3■■□□□ 1.32
PKP3-211ENST00000534401 EPM2AIP1Q7L775 607 aaPredicted RBP23.3■■□□□ 1.32
PKP3-211ENST00000534401 SLC22A17Q8WUG5 538 aa23.3■■□□□ 1.32
PKP3-211ENST00000534401 AUTS2Q8WXX7 1259 aa23.3■■□□□ 1.32
PKP3-211ENST00000534401 ACCSQ96QU6 501 aa23.3■■□□□ 1.32
PKP3-211ENST00000534401 IKZF4Q9H2S9 585 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms