RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 VWA3AA6NCI4 1184 aa9.79□□□□□ -0.84
COPB1-211ENST00000534234 YARSP54577 528 aaKnown RBP9.79□□□□□ -0.84
COPB1-211ENST00000534234 VCPP55072 806 aaKnown RBP9.79□□□□□ -0.84
COPB1-211ENST00000534234 RAD51AP2Q09MP3 1159 aa9.79□□□□□ -0.84
COPB1-211ENST00000534234 ELAVL2Q12926 359 aaKnown RBP9.79□□□□□ -0.84
COPB1-211ENST00000534234 GLRA4Q5JXX5 417 aa9.79□□□□□ -0.84
COPB1-211ENST00000534234 LARP1BQ659C4 914 aaKnown RBP9.79□□□□□ -0.84
COPB1-211ENST00000534234 ARL6IP4Q66PJ3 421 aaKnown RBP9.79□□□□□ -0.84
COPB1-211ENST00000534234 DCLRE1AQ6PJP8 1040 aa9.79□□□□□ -0.84
COPB1-211ENST00000534234 KCTD17Q8N5Z5 321 aa9.79□□□□□ -0.84
COPB1-211ENST00000534234 LNX1Q8TBB1 728 aaPredicted RBP9.79□□□□□ -0.84
COPB1-211ENST00000534234 PIK3R5Q8WYR1 880 aa9.79□□□□□ -0.84
COPB1-211ENST00000534234 SMG7Q92540 1137 aaKnown RBP9.79□□□□□ -0.84
COPB1-211ENST00000534234 STAMQ92783 540 aa9.79□□□□□ -0.84
COPB1-211ENST00000534234 ZNF707Q96C28 371 aaPredicted RBP9.79□□□□□ -0.84
COPB1-211ENST00000534234 PPP1R10Q96QC0 940 aaKnown RBP9.79□□□□□ -0.84
COPB1-211ENST00000534234 PLIN2Q99541 437 aa9.79□□□□□ -0.84
COPB1-211ENST00000534234 CLSTN3Q9BQT9 956 aa9.79□□□□□ -0.84
COPB1-211ENST00000534234 NTPCRQ9BSD7 190 aaKnown RBP9.79□□□□□ -0.84
COPB1-211ENST00000534234 TARS2Q9BW92 718 aaKnown RBP9.79□□□□□ -0.84
COPB1-211ENST00000534234 MRPL4Q9BYD3 311 aaKnown RBP9.79□□□□□ -0.84
COPB1-211ENST00000534234 C17orf75Q9HAS0 396 aa9.79□□□□□ -0.84
COPB1-211ENST00000534234 KCNK12Q9HB15 430 aa9.79□□□□□ -0.84
COPB1-211ENST00000534234 PIDD1Q9HB75 910 aa9.79□□□□□ -0.84
COPB1-211ENST00000534234 PTPRHQ9HD43 1115 aa9.79□□□□□ -0.84
COPB1-211ENST00000534234 ARHGAP28Q9P2N2 729 aa9.79□□□□□ -0.84
COPB1-211ENST00000534234 KCNG1Q9UIX4 513 aa9.79□□□□□ -0.84
COPB1-211ENST00000534234 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.79□□□□□ -0.84
COPB1-211ENST00000534234 SMIM28A0A1B0GU29 152 aa9.78□□□□□ -0.84
COPB1-211ENST00000534234 SLC16A4O15374 487 aa9.78□□□□□ -0.84
COPB1-211ENST00000534234 N4BP1O75113 896 aaKnown RBP9.78□□□□□ -0.84
COPB1-211ENST00000534234 B3GAT3O94766 335 aa9.78□□□□□ -0.84
COPB1-211ENST00000534234 IGFBP6P24592 240 aaPredicted RBP9.78□□□□□ -0.84
COPB1-211ENST00000534234 GUCY2CP25092 1073 aa9.78□□□□□ -0.84
COPB1-211ENST00000534234 GBP2P32456 591 aaPredicted RBP9.78□□□□□ -0.84
COPB1-211ENST00000534234 GRM5P41594 1212 aa9.78□□□□□ -0.84
COPB1-211ENST00000534234 CLCNKBP51801 687 aa9.78□□□□□ -0.84
COPB1-211ENST00000534234 OSTNP61366 133 aa9.78□□□□□ -0.84
COPB1-211ENST00000534234 MAPK7Q13164 816 aa9.78□□□□□ -0.84
COPB1-211ENST00000534234 TDGQ13569 410 aa9.78□□□□□ -0.84
COPB1-211ENST00000534234 PSMD5Q16401 504 aa9.78□□□□□ -0.84
COPB1-211ENST00000534234 ZNF568Q3ZCX4 644 aa9.78□□□□□ -0.84
COPB1-211ENST00000534234 HYIQ5T013 277 aa9.78□□□□□ -0.84
COPB1-211ENST00000534234 TAS1R3Q7RTX0 852 aa9.78□□□□□ -0.84
COPB1-211ENST00000534234 CEP120Q8N960 986 aa9.78□□□□□ -0.84
COPB1-211ENST00000534234 SYT2Q8N9I0 419 aaPredicted RBP9.78□□□□□ -0.84
COPB1-211ENST00000534234 PRSS33Q8NF86 280 aa9.78□□□□□ -0.84
COPB1-211ENST00000534234 CDK5RAP3Q96JB5 506 aa9.78□□□□□ -0.84
COPB1-211ENST00000534234 PNMA5Q96PV4 448 aa9.78□□□□□ -0.84
COPB1-211ENST00000534234 TIPINQ9BVW5 301 aa9.78□□□□□ -0.84
COPB1-211ENST00000534234 CCDC94Q9BW85 323 aaPredicted RBP9.78□□□□□ -0.84
COPB1-211ENST00000534234 PRKD2Q9BZL6 878 aa9.78□□□□□ -0.84
COPB1-211ENST00000534234 CDT1Q9H211 546 aa9.78□□□□□ -0.84
COPB1-211ENST00000534234 TOPORSQ9NS56 1045 aaPredicted RBP9.78□□□□□ -0.84
COPB1-211ENST00000534234 ZDHHC7Q9NXF8 308 aa9.78□□□□□ -0.84
COPB1-211ENST00000534234 PHLPP2Q6ZVD8 1323 aa9.78□□□□□ -0.84
COPB1-211ENST00000534234 TECTAO75443 2155 aa9.78□□□□□ -0.84
COPB1-211ENST00000534234 ZMYND10O75800 440 aa9.77□□□□□ -0.85
COPB1-211ENST00000534234 PAPLNO95428 1278 aa9.77□□□□□ -0.85
COPB1-211ENST00000534234 PLS3P13797 630 aa9.77□□□□□ -0.85
COPB1-211ENST00000534234 MRE11P49959 708 aa9.77□□□□□ -0.85
COPB1-211ENST00000534234 SMTNP53814 917 aa9.77□□□□□ -0.85
COPB1-211ENST00000534234 PTPN5P54829 565 aa9.77□□□□□ -0.85
COPB1-211ENST00000534234 STRN3Q13033 797 aa9.77□□□□□ -0.85
COPB1-211ENST00000534234 UPP1Q16831 310 aa9.77□□□□□ -0.85
COPB1-211ENST00000534234 PDXDC1Q6P996 788 aa9.77□□□□□ -0.85
COPB1-211ENST00000534234 ALKAL1Q6UXT8 129 aa9.77□□□□□ -0.85
COPB1-211ENST00000534234 SPIRE2Q8WWL2 714 aa9.77□□□□□ -0.85
COPB1-211ENST00000534234 ZBTB45Q96K62 511 aaPredicted RBP9.77□□□□□ -0.85
COPB1-211ENST00000534234 UROC1Q96N76 676 aa9.77□□□□□ -0.85
COPB1-211ENST00000534234 TBC1D32Q96NH3 1257 aa9.77□□□□□ -0.85
COPB1-211ENST00000534234 ACAP3Q96P50 834 aa9.77□□□□□ -0.85
COPB1-211ENST00000534234 GOLGA2P5Q9HBQ8 144 aa9.77□□□□□ -0.85
COPB1-211ENST00000534234 IGSF9Q9P2J2 1179 aa9.77□□□□□ -0.85
COPB1-211ENST00000534234 CLUHO75153 1309 aa9.77□□□□□ -0.85
COPB1-211ENST00000534234 TMEM189-UBE2V1I3L0A0 370 aa9.76□□□□□ -0.85
COPB1-211ENST00000534234 ADAM12O43184 909 aa9.76□□□□□ -0.85
COPB1-211ENST00000534234 TRAPPC3O43617 180 aa9.76□□□□□ -0.85
COPB1-211ENST00000534234 PLA2G4BP0C869 781 aa9.76□□□□□ -0.85
COPB1-211ENST00000534234 MCF2P10911 925 aa9.76□□□□□ -0.85
COPB1-211ENST00000534234 FGFR3P22607 806 aa9.76□□□□□ -0.85
COPB1-211ENST00000534234 PROZP22891 400 aa9.76□□□□□ -0.85
COPB1-211ENST00000534234 OR1D2P34982 312 aa9.76□□□□□ -0.85
COPB1-211ENST00000534234 UBA7P41226 1012 aa9.76□□□□□ -0.85
COPB1-211ENST00000534234 SLC12A3P55017 1021 aa9.76□□□□□ -0.85
COPB1-211ENST00000534234 TCF15Q12870 199 aa9.76□□□□□ -0.85
COPB1-211ENST00000534234 XKR4Q5GH76 650 aa9.76□□□□□ -0.85
COPB1-211ENST00000534234 MPZL3Q6UWV2 235 aa9.76□□□□□ -0.85
COPB1-211ENST00000534234 CD300LGQ6UXG3 332 aa9.76□□□□□ -0.85
COPB1-211ENST00000534234 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.76□□□□□ -0.85
COPB1-211ENST00000534234 TMEM161BQ8NDZ6 487 aa9.76□□□□□ -0.85
COPB1-211ENST00000534234 RSAD2Q8WXG1 361 aa9.76□□□□□ -0.85
COPB1-211ENST00000534234 DDX27Q96GQ7 796 aaKnown RBP9.76□□□□□ -0.85
COPB1-211ENST00000534234 AK8Q96MA6 479 aa9.76□□□□□ -0.85
COPB1-211ENST00000534234 MYADMQ96S97 322 aa9.76□□□□□ -0.85
COPB1-211ENST00000534234 MFSD1Q9H3U5 465 aa9.76□□□□□ -0.85
COPB1-211ENST00000534234 SLC38A7Q9NVC3 462 aa9.76□□□□□ -0.85
COPB1-211ENST00000534234 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.76□□□□□ -0.851e-34■■■■□ 19.8
COPB1-211ENST00000534234 KCND2Q9NZV8 630 aa9.76□□□□□ -0.85
COPB1-211ENST00000534234 FBXW11Q9UKB1 542 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms