RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 ZNF536O15090 1300 aa4.32□□□□□ -1.72
CSMD3-210ENST00000534172 AKR1B10O60218 316 aa4.32□□□□□ -1.72
CSMD3-210ENST00000534172 FGAP02671 866 aa4.32□□□□□ -1.72
CSMD3-210ENST00000534172 USP14P54578 494 aa4.32□□□□□ -1.72
CSMD3-210ENST00000534172 ZNF280AP59817 542 aaPredicted RBP4.32□□□□□ -1.72
CSMD3-210ENST00000534172 JAG1P78504 1218 aa4.32□□□□□ -1.72
CSMD3-210ENST00000534172 ATP2C1P98194 919 aaPredicted RBP4.32□□□□□ -1.72
CSMD3-210ENST00000534172 ZNF267Q14586 743 aaPredicted RBP4.32□□□□□ -1.72
CSMD3-210ENST00000534172 HS1BP3Q53T59 392 aa4.32□□□□□ -1.72
CSMD3-210ENST00000534172 GLB1LQ6UWU2 654 aa4.32□□□□□ -1.72
CSMD3-210ENST00000534172 ADGRE4PQ86SQ3 457 aa4.32□□□□□ -1.72
CSMD3-210ENST00000534172 PARD3BQ8TEW8 1205 aa4.32□□□□□ -1.72
CSMD3-210ENST00000534172 PNISRQ8TF01 805 aaKnown RBP4.32□□□□□ -1.72
CSMD3-210ENST00000534172 ARL8AQ96BM9 186 aa4.32□□□□□ -1.72
CSMD3-210ENST00000534172 BORCS6Q96GS4 357 aa4.32□□□□□ -1.72
CSMD3-210ENST00000534172 XYLT2Q9H1B5 865 aa4.32□□□□□ -1.72
CSMD3-210ENST00000534172 PHTF1Q9UMS5 762 aa4.32□□□□□ -1.72
CSMD3-210ENST00000534172 OAZ3Q9UMX2 235 aa4.32□□□□□ -1.72
CSMD3-210ENST00000534172 CTNND1O60716 968 aaKnown RBP4.32□□□□□ -1.72
CSMD3-210ENST00000534172 ARIH2O95376 493 aa4.32□□□□□ -1.72
CSMD3-210ENST00000534172 GSPT1P15170 499 aaKnown RBP4.32□□□□□ -1.72
CSMD3-210ENST00000534172 CNR2P34972 360 aa4.32□□□□□ -1.72
CSMD3-210ENST00000534172 ATP2B3Q16720 1220 aa4.32□□□□□ -1.72
CSMD3-210ENST00000534172 LCNL1Q6ZST4 164 aa4.32□□□□□ -1.72
CSMD3-210ENST00000534172 CHST15Q7LFX5 561 aaPredicted RBP4.32□□□□□ -1.72
CSMD3-210ENST00000534172 PIK3C3Q8NEB9 887 aa4.32□□□□□ -1.72
CSMD3-210ENST00000534172 SHCBP1Q8NEM2 672 aa4.32□□□□□ -1.72
CSMD3-210ENST00000534172 VPS37AQ8NEZ2 397 aa4.32□□□□□ -1.72
CSMD3-210ENST00000534172 PPM1EQ8WY54 764 aa4.32□□□□□ -1.72
CSMD3-210ENST00000534172 CDC5LQ99459 802 aaKnown RBP4.32□□□□□ -1.72
CSMD3-210ENST00000534172 C7orf25Q9BPX7 421 aa4.32□□□□□ -1.72
CSMD3-210ENST00000534172 PRDM12Q9H4Q4 367 aa4.32□□□□□ -1.72
CSMD3-210ENST00000534172 RTEL1Q9NZ71 1219 aa4.32□□□□□ -1.72
CSMD3-210ENST00000534172 DNM3Q9UQ16 869 aa4.32□□□□□ -1.72
CSMD3-210ENST00000534172 PTPN22Q9Y2R2 807 aa4.32□□□□□ -1.72
CSMD3-210ENST00000534172 A6NNZ2 444 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 SGTAO43765 313 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 OFD1O75665 1012 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 TOX4O94842 621 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 MYBP10242 640 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 OSMP13725 252 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 IL2RBP14784 551 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 C5AR1P21730 350 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 PER3P56645 1201 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 KIF23Q02241 960 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-210ENST00000534172 RAPGEF1Q13905 1077 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 RNF151Q2KHN1 245 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 TOGARAM2Q6ZUX3 1019 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 CIR1Q86X95 450 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-210ENST00000534172 GPATCH11Q8N954 259 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 OR7D4Q8NG98 312 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 OR14K1Q8NGZ2 314 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 GJA10Q969M2 543 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 TCF25Q9BQ70 676 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 GPRC5DQ9NZD1 345 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 MAGI3Q5TCQ9 1506 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 ARAP3Q8WWN8 1544 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 CDK12Q9NYV4 1490 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-210ENST00000534172 SLC16A6O15403 523 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 TCEA3O75764 348 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 MYL3P08590 195 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 RHCEP18577 417 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 TRAPPC10P48553 1259 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 RHDQ02161 417 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 PTH1RQ03431 593 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 POLNQ7Z5Q5 900 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 ENAHQ8N8S7 591 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-210ENST00000534172 ANKRD53Q8N9V6 530 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 GIMAP8Q8ND71 665 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-210ENST00000534172 FEZF2Q8TBJ5 459 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 PDCD2LQ9BRP1 358 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-210ENST00000534172 KLHL11Q9NVR0 708 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 MOCS1Q9NZB8 636 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 RPS6KL1Q9Y6S9 549 aa4.31□□□□□ -1.72
CSMD3-210ENST00000534172 RAPGEF6Q8TEU7 1601 aa4.3□□□□□ -1.72
CSMD3-210ENST00000534172 POLA1P09884 1462 aaPredicted RBP4.3□□□□□ -1.72
CSMD3-210ENST00000534172 CYP27B1O15528 508 aa4.3□□□□□ -1.72
CSMD3-210ENST00000534172 TMEM127O75204 238 aa4.3□□□□□ -1.72
CSMD3-210ENST00000534172 RAD17O75943 681 aa4.3□□□□□ -1.72
CSMD3-210ENST00000534172 HHEXQ03014 270 aa4.3□□□□□ -1.72
CSMD3-210ENST00000534172 FZD5Q13467 585 aa4.3□□□□□ -1.72
CSMD3-210ENST00000534172 MST1LQ2TV78 715 aa4.3□□□□□ -1.72
CSMD3-210ENST00000534172 TMEM95Q3KNT9 176 aa4.3□□□□□ -1.72
CSMD3-210ENST00000534172 CATIPQ7Z7H3 387 aa4.3□□□□□ -1.72
CSMD3-210ENST00000534172 TTC7BQ86TV6 843 aa4.3□□□□□ -1.72
CSMD3-210ENST00000534172 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.3□□□□□ -1.72
CSMD3-210ENST00000534172 NRG4Q8WWG1 115 aa4.3□□□□□ -1.72
CSMD3-210ENST00000534172 CASKIN2Q8WXE0 1202 aa4.3□□□□□ -1.72
CSMD3-210ENST00000534172 CFHR4Q92496 578 aa4.3□□□□□ -1.72
CSMD3-210ENST00000534172 COA7Q96BR5 231 aa4.3□□□□□ -1.72
CSMD3-210ENST00000534172 ACO2Q99798 780 aaKnown RBP4.3□□□□□ -1.72
CSMD3-210ENST00000534172 IL23AQ9NPF7 189 aa4.3□□□□□ -1.72
CSMD3-210ENST00000534172 PLCB1Q9NQ66 1216 aa4.3□□□□□ -1.72
CSMD3-210ENST00000534172 LANCL2Q9NS86 450 aa4.3□□□□□ -1.72
CSMD3-210ENST00000534172 POLHQ9Y253 713 aa4.3□□□□□ -1.72
CSMD3-210ENST00000534172 SLC30A1Q9Y6M5 507 aa4.3□□□□□ -1.72
CSMD3-210ENST00000534172 FER1L4A9Z1Z3 1794 aa4.3□□□□□ -1.72
CSMD3-210ENST00000534172 CUX1P39880 1505 aa4.3□□□□□ -1.72
CSMD3-210ENST00000534172 A0A1W2PRX2 142 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms