RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 KCNH6Q9H252 994 aa3.61□□□□□ -1.83
ATM-220ENST00000533526 MAN1C1Q9NR34 630 aa3.61□□□□□ -1.83
ATM-220ENST00000533526 TDP1Q9NUW8 608 aa3.61□□□□□ -1.83
ATM-220ENST00000533526 DDX56Q9NY93 547 aaKnown RBP3.61□□□□□ -1.83
ATM-220ENST00000533526 TUBD1Q9UJT1 453 aa3.61□□□□□ -1.83
ATM-220ENST00000533526 AJAP1Q9UKB5 411 aaPredicted RBP3.61□□□□□ -1.83
ATM-220ENST00000533526 SORCS3Q9UPU3 1222 aa3.61□□□□□ -1.83
ATM-220ENST00000533526 SIK3Q9Y2K2 1263 aa3.61□□□□□ -1.83
ATM-220ENST00000533526 MYBBP1AQ9BQG0 1328 aaKnown RBP3.61□□□□□ -1.83
ATM-220ENST00000533526 GAGE12BA1L429 117 aa3.6□□□□□ -1.83
ATM-220ENST00000533526 GAGE12HA6NDE8 117 aa3.6□□□□□ -1.83
ATM-220ENST00000533526 DRGXA6NNA5 263 aa3.6□□□□□ -1.83
ATM-220ENST00000533526 GRXCR1A8MXD5 290 aa3.6□□□□□ -1.83
ATM-220ENST00000533526 HTRA2O43464 458 aaPredicted RBP3.6□□□□□ -1.83
ATM-220ENST00000533526 GPR32O75388 356 aa3.6□□□□□ -1.83
ATM-220ENST00000533526 SCAF4O95104 1147 aaKnown RBP3.6□□□□□ -1.83
ATM-220ENST00000533526 PDGFRBP09619 1106 aa3.6□□□□□ -1.83
ATM-220ENST00000533526 SPATA31D3P0C874 917 aa3.6□□□□□ -1.83
ATM-220ENST00000533526 ALAS1P13196 640 aa3.6□□□□□ -1.83
ATM-220ENST00000533526 C6P13671 934 aa3.6□□□□□ -1.83
ATM-220ENST00000533526 DDCP20711 480 aa3.6□□□□□ -1.83
ATM-220ENST00000533526 MAKP20794 623 aa3.6□□□□□ -1.83
ATM-220ENST00000533526 MCM7P33993 719 aa3.6□□□□□ -1.83
ATM-220ENST00000533526 SLC6A9P48067 706 aa3.6□□□□□ -1.83
ATM-220ENST00000533526 KIF23Q02241 960 aaPredicted RBP3.6□□□□□ -1.83
ATM-220ENST00000533526 CREMQ03060 361 aa3.6□□□□□ -1.83
ATM-220ENST00000533526 TMEM240Q5SV17 173 aa3.6□□□□□ -1.83
ATM-220ENST00000533526 AFMIDQ63HM1 303 aa3.6□□□□□ -1.83
ATM-220ENST00000533526 SPATA31D4Q6ZUB0 917 aa3.6□□□□□ -1.83
ATM-220ENST00000533526 SEM1Q6ZVN7 128 aa3.6□□□□□ -1.83
ATM-220ENST00000533526 GDF7Q7Z4P5 450 aa3.6□□□□□ -1.83
ATM-220ENST00000533526 TTC7BQ86TV6 843 aa3.6□□□□□ -1.83
ATM-220ENST00000533526 SYNE4Q8N205 404 aa3.6□□□□□ -1.83
ATM-220ENST00000533526 ZNF276Q8N554 614 aa3.6□□□□□ -1.83
ATM-220ENST00000533526 OR10H5Q8NGA6 315 aa3.6□□□□□ -1.83
ATM-220ENST00000533526 OR2I1PQ8NGU4 316 aa3.6□□□□□ -1.83
ATM-220ENST00000533526 SLC35B2Q8TB61 432 aa3.6□□□□□ -1.83
ATM-220ENST00000533526 CPT1CQ8TCG5 803 aa3.6□□□□□ -1.83
ATM-220ENST00000533526 SLC25A43Q8WUT9 341 aaPredicted RBP3.6□□□□□ -1.83
ATM-220ENST00000533526 SMAD5Q99717 465 aaKnown RBP3.6□□□□□ -1.83
ATM-220ENST00000533526 SLC46A2Q9BY10 475 aa3.6□□□□□ -1.83
ATM-220ENST00000533526 TCF7L1Q9HCS4 588 aa3.6□□□□□ -1.83
ATM-220ENST00000533526 CALCOCO1Q9P1Z2 691 aa3.6□□□□□ -1.83
ATM-220ENST00000533526 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.6□□□□□ -1.83
ATM-220ENST00000533526 FZD1Q9UP38 647 aa3.6□□□□□ -1.83
ATM-220ENST00000533526 IPPQ9Y573 584 aa3.6□□□□□ -1.83
ATM-220ENST00000533526 E2F8A0AVK6 867 aa3.59□□□□□ -1.83
ATM-220ENST00000533526 CCDC154A6NI56 674 aa3.59□□□□□ -1.83
ATM-220ENST00000533526 NPIPB8E9PQR5 432 aa3.59□□□□□ -1.83
ATM-220ENST00000533526 RNASET2O00584 256 aaKnown RBP3.59□□□□□ -1.83
ATM-220ENST00000533526 CYR61O00622 381 aa3.59□□□□□ -1.83
ATM-220ENST00000533526 ALDH1L1O75891 902 aa3.59□□□□□ -1.83
ATM-220ENST00000533526 AMY1AP04745 511 aa3.59□□□□□ -1.83
ATM-220ENST00000533526 HLA-DOAP06340 250 aa3.59□□□□□ -1.83
ATM-220ENST00000533526 MTHFD1P11586 935 aaKnown RBP3.59□□□□□ -1.83
ATM-220ENST00000533526 LAG3P18627 525 aa3.59□□□□□ -1.83
ATM-220ENST00000533526 AKAP5P24588 427 aa3.59□□□□□ -1.83
ATM-220ENST00000533526 APOBEC3AP31941 199 aaPredicted RBP3.59□□□□□ -1.83
ATM-220ENST00000533526 ALDH1A3P47895 512 aa3.59□□□□□ -1.83
ATM-220ENST00000533526 NEK2P51955 445 aa3.59□□□□□ -1.83
ATM-220ENST00000533526 CTXN1P60606 82 aa3.59□□□□□ -1.83
ATM-220ENST00000533526 MXRA7P84157 204 aa3.59□□□□□ -1.83
ATM-220ENST00000533526 ATP8B2P98198 1209 aa3.59□□□□□ -1.83
ATM-220ENST00000533526 NHLH2Q02577 135 aa3.59□□□□□ -1.83
ATM-220ENST00000533526 ABHD18Q0P651 414 aa3.59□□□□□ -1.83
ATM-220ENST00000533526 MTM1Q13496 603 aa3.59□□□□□ -1.83
ATM-220ENST00000533526 RAB39AQ14964 217 aa3.59□□□□□ -1.83
ATM-220ENST00000533526 ODF1Q14990 250 aa3.59□□□□□ -1.83
ATM-220ENST00000533526 DACT2Q5SW24 774 aa3.59□□□□□ -1.83
ATM-220ENST00000533526 ARMC6Q6NXE6 501 aa3.59□□□□□ -1.83
ATM-220ENST00000533526 PLXDC1Q8IUK5 500 aa3.59□□□□□ -1.83
ATM-220ENST00000533526 CMTR2Q8IYT2 770 aaKnown RBP3.59□□□□□ -1.83
ATM-220ENST00000533526 CPA6Q8N4T0 437 aa3.59□□□□□ -1.83
ATM-220ENST00000533526 LENG9Q96B70 501 aa3.59□□□□□ -1.83
ATM-220ENST00000533526 NUP88Q99567 741 aaPredicted RBP3.59□□□□□ -1.83
ATM-220ENST00000533526 TRPM5Q9NZQ8 1165 aa3.59□□□□□ -1.83
ATM-220ENST00000533526 LIMCH1Q9UPQ0 1083 aa3.59□□□□□ -1.83
ATM-220ENST00000533526 ATP11BQ9Y2G3 1177 aa3.59□□□□□ -1.83
ATM-220ENST00000533526 ANKRD6Q9Y2G4 727 aa3.59□□□□□ -1.83
ATM-220ENST00000533526 REXO2Q9Y3B8 237 aaKnown RBP3.59□□□□□ -1.83
ATM-220ENST00000533526 PCDHA13Q9Y5I0 950 aa3.59□□□□□ -1.83
ATM-220ENST00000533526 ACTL7AQ9Y615 435 aa3.59□□□□□ -1.83
ATM-220ENST00000533526 CFAP20Q9Y6A4 193 aaKnown RBP3.59□□□□□ -1.83
ATM-220ENST00000533526 LEFTY2O00292 366 aa3.58□□□□□ -1.84
ATM-220ENST00000533526 NARSO43776 548 aaKnown RBP3.58□□□□□ -1.84
ATM-220ENST00000533526 DTNBO60941 627 aa3.58□□□□□ -1.84
ATM-220ENST00000533526 FAM20BO75063 409 aa3.58□□□□□ -1.84
ATM-220ENST00000533526 RPS6KA4O75676 772 aa3.58□□□□□ -1.84
ATM-220ENST00000533526 ZNF202O95125 648 aa3.58□□□□□ -1.84
ATM-220ENST00000533526 ARIH2O95376 493 aa3.58□□□□□ -1.84
ATM-220ENST00000533526 ITGB1P05556 798 aa3.58□□□□□ -1.84
ATM-220ENST00000533526 ZSCAN20P17040 1043 aaPredicted RBP3.58□□□□□ -1.84
ATM-220ENST00000533526 PCSK1P29120 753 aa3.58□□□□□ -1.84
ATM-220ENST00000533526 ACVRL1P37023 503 aa3.58□□□□□ -1.84
ATM-220ENST00000533526 RAP2BP61225 183 aa3.58□□□□□ -1.84
ATM-220ENST00000533526 DGCR2P98153 550 aa3.58□□□□□ -1.84
ATM-220ENST00000533526 SLC25A3Q00325 362 aa3.58□□□□□ -1.84
ATM-220ENST00000533526 CSRP2Q16527 193 aa3.58□□□□□ -1.84
ATM-220ENST00000533526 UAP1L1Q3KQV9 507 aa3.58□□□□□ -1.84
ATM-220ENST00000533526 THEMIS2Q5TEJ8 643 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms