RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 C1orf186Q6ZWK4 172 aa12.44□□□□□ -0.42
CLCF1-202ENST00000533438 TAS1R3Q7RTX0 852 aa12.44□□□□□ -0.42
CLCF1-202ENST00000533438 ZBTB33Q86T24 672 aa12.44□□□□□ -0.42
CLCF1-202ENST00000533438 UBALD2Q8IYN6 164 aa12.44□□□□□ -0.42
CLCF1-202ENST00000533438 ACO2Q99798 780 aaKnown RBP12.44□□□□□ -0.42
CLCF1-202ENST00000533438 RUSC1Q9BVN2 902 aa12.44□□□□□ -0.42
CLCF1-202ENST00000533438 TMEM134Q9H6X4 195 aa12.44□□□□□ -0.42
CLCF1-202ENST00000533438 FOXD4L1Q9NU39 408 aa12.44□□□□□ -0.42
CLCF1-202ENST00000533438 ARHGAP28Q9P2N2 729 aa12.44□□□□□ -0.42
CLCF1-202ENST00000533438 TNFSF13BQ9Y275 285 aa12.44□□□□□ -0.42
CLCF1-202ENST00000533438 VPS13AQ96RL7 3174 aa12.43□□□□□ -0.42
CLCF1-202ENST00000533438 CCDC195A0A1B0GUA6 201 aa12.43□□□□□ -0.42
CLCF1-202ENST00000533438 TGM5O43548 720 aa12.43□□□□□ -0.42
CLCF1-202ENST00000533438 TADA2AO75478 443 aa12.43□□□□□ -0.42
CLCF1-202ENST00000533438 ASGR2P07307 311 aa12.43□□□□□ -0.42
CLCF1-202ENST00000533438 DDIT3P35638 169 aa12.43□□□□□ -0.42
CLCF1-202ENST00000533438 VCPP55072 806 aaKnown RBP12.43□□□□□ -0.42
CLCF1-202ENST00000533438 CREMQ03060 361 aa12.43□□□□□ -0.42
CLCF1-202ENST00000533438 RTP2Q5QGT7 225 aa12.43□□□□□ -0.42
CLCF1-202ENST00000533438 KCTD17Q8N5Z5 321 aa12.43□□□□□ -0.42
CLCF1-202ENST00000533438 SPRYD3Q8NCJ5 442 aa12.43□□□□□ -0.42
CLCF1-202ENST00000533438 HASPINQ8TF76 798 aa12.43□□□□□ -0.42
CLCF1-202ENST00000533438 RIN2Q8WYP3 895 aaPredicted RBP12.43□□□□□ -0.42
CLCF1-202ENST00000533438 ZNF707Q96C28 371 aaPredicted RBP12.43□□□□□ -0.42
CLCF1-202ENST00000533438 DRC1Q96MC2 740 aa12.43□□□□□ -0.42
CLCF1-202ENST00000533438 PNMA5Q96PV4 448 aa12.43□□□□□ -0.42
CLCF1-202ENST00000533438 PPP1R10Q96QC0 940 aaKnown RBP12.43□□□□□ -0.42
CLCF1-202ENST00000533438 TIPINQ9BVW5 301 aa12.43□□□□□ -0.42
CLCF1-202ENST00000533438 SMOC2Q9H3U7 446 aa12.43□□□□□ -0.42
CLCF1-202ENST00000533438 PLEKHA4Q9H4M7 779 aa12.43□□□□□ -0.42
CLCF1-202ENST00000533438 C17orf75Q9HAS0 396 aa12.43□□□□□ -0.42
CLCF1-202ENST00000533438 PTPRHQ9HD43 1115 aa12.43□□□□□ -0.42
CLCF1-202ENST00000533438 LIMD1Q9UGP4 676 aa12.43□□□□□ -0.42
CLCF1-202ENST00000533438 GDAQ9Y2T3 454 aa12.43□□□□□ -0.42
CLCF1-202ENST00000533438 CACNA1HO95180 2353 aa12.43□□□□□ -0.42
CLCF1-202ENST00000533438 CCDC169A6NNP5 214 aa12.42□□□□□ -0.42
CLCF1-202ENST00000533438 H3BQV1 296 aa12.42□□□□□ -0.42
CLCF1-202ENST00000533438 TMEM189-UBE2V1I3L0A0 370 aa12.42□□□□□ -0.42
CLCF1-202ENST00000533438 ABLIM1O14639 778 aa12.42□□□□□ -0.42
CLCF1-202ENST00000533438 N4BP1O75113 896 aaKnown RBP12.42□□□□□ -0.42
CLCF1-202ENST00000533438 RFPL2O75678 378 aa12.42□□□□□ -0.42
CLCF1-202ENST00000533438 PDGFBP01127 241 aaPredicted RBP12.42□□□□□ -0.42
CLCF1-202ENST00000533438 SPATA31D3P0C874 917 aa12.42□□□□□ -0.42
CLCF1-202ENST00000533438 RPL17P18621 184 aaKnown RBP12.42□□□□□ -0.42
CLCF1-202ENST00000533438 PROZP22891 400 aa12.42□□□□□ -0.42
CLCF1-202ENST00000533438 GUCY2CP25092 1073 aa12.42□□□□□ -0.42
CLCF1-202ENST00000533438 NBL1P41271 181 aa12.42□□□□□ -0.42
CLCF1-202ENST00000533438 GRM5P41594 1212 aa12.42□□□□□ -0.42
CLCF1-202ENST00000533438 DMP1Q13316 513 aaPredicted RBP12.42□□□□□ -0.42
CLCF1-202ENST00000533438 XKR4Q5GH76 650 aa12.42□□□□□ -0.42
CLCF1-202ENST00000533438 ARL6IP4Q66PJ3 421 aaKnown RBP12.42□□□□□ -0.42
CLCF1-202ENST00000533438 ELMSAN1Q6PJG2 1045 aa12.42□□□□□ -0.42
CLCF1-202ENST00000533438 PRSS55Q6UWB4 352 aaPredicted RBP12.42□□□□□ -0.42
CLCF1-202ENST00000533438 ALKAL1Q6UXT8 129 aa12.42□□□□□ -0.42
CLCF1-202ENST00000533438 SPATA31D4Q6ZUB0 917 aa12.42□□□□□ -0.42
CLCF1-202ENST00000533438 OTOP3Q7RTS5 596 aa12.42□□□□□ -0.42
CLCF1-202ENST00000533438 PALB2Q86YC2 1186 aa12.42□□□□□ -0.42
CLCF1-202ENST00000533438 GLYCTKQ8IVS8 523 aa12.42□□□□□ -0.42
CLCF1-202ENST00000533438 CEP120Q8N960 986 aa12.42□□□□□ -0.42
CLCF1-202ENST00000533438 SYT2Q8N9I0 419 aaPredicted RBP12.42□□□□□ -0.42
CLCF1-202ENST00000533438 LNX1Q8TBB1 728 aaPredicted RBP12.42□□□□□ -0.42
CLCF1-202ENST00000533438 PIK3R5Q8WYR1 880 aa12.42□□□□□ -0.42
CLCF1-202ENST00000533438 ACSF2Q96CM8 615 aaPredicted RBP12.42□□□□□ -0.42
CLCF1-202ENST00000533438 CLSTN3Q9BQT9 956 aa12.42□□□□□ -0.42
CLCF1-202ENST00000533438 NTPCRQ9BSD7 190 aaKnown RBP12.42□□□□□ -0.42
CLCF1-202ENST00000533438 TTPALQ9BTX7 342 aa12.42□□□□□ -0.42
CLCF1-202ENST00000533438 NT5C3AQ9H0P0 336 aa12.42□□□□□ -0.42
CLCF1-202ENST00000533438 CDT1Q9H211 546 aa12.42□□□□□ -0.42
CLCF1-202ENST00000533438 WDR6Q9NNW5 1121 aaKnown RBP12.42□□□□□ -0.42
CLCF1-202ENST00000533438 ZDHHC7Q9NXF8 308 aa12.42□□□□□ -0.42
CLCF1-202ENST00000533438 ZDBF2Q9HCK1 2354 aa12.42□□□□□ -0.42
CLCF1-202ENST00000533438 DOCK6Q96HP0 2047 aa12.42□□□□□ -0.42
CLCF1-202ENST00000533438 CLUHO75153 1309 aa12.41□□□□□ -0.42
CLCF1-202ENST00000533438 VWA3AA6NCI4 1184 aa12.41□□□□□ -0.42
CLCF1-202ENST00000533438 GALR2O43603 387 aaPredicted RBP12.41□□□□□ -0.42
CLCF1-202ENST00000533438 GFRA3O60609 400 aa12.41□□□□□ -0.42
CLCF1-202ENST00000533438 MYBP10242 640 aa12.41□□□□□ -0.42
CLCF1-202ENST00000533438 IGFBP6P24592 240 aaPredicted RBP12.41□□□□□ -0.42
CLCF1-202ENST00000533438 SLC12A3P55017 1021 aa12.41□□□□□ -0.42
CLCF1-202ENST00000533438 ELAVL2Q12926 359 aaKnown RBP12.41□□□□□ -0.42
CLCF1-202ENST00000533438 TMEM119Q4V9L6 283 aa12.41□□□□□ -0.42
CLCF1-202ENST00000533438 GLRA4Q5JXX5 417 aa12.41□□□□□ -0.42
CLCF1-202ENST00000533438 FAM171A1Q5VUB5 890 aa12.41□□□□□ -0.42
CLCF1-202ENST00000533438 CD300LGQ6UXG3 332 aa12.41□□□□□ -0.42
CLCF1-202ENST00000533438 APBB1IPQ7Z5R6 666 aaPredicted RBP12.41□□□□□ -0.42
CLCF1-202ENST00000533438 SMG7Q92540 1137 aaKnown RBP12.41□□□□□ -0.42
CLCF1-202ENST00000533438 MRPL4Q9BYD3 311 aaKnown RBP12.41□□□□□ -0.42
CLCF1-202ENST00000533438 KMT5AQ9NQR1 393 aa12.41□□□□□ -0.42
CLCF1-202ENST00000533438 DCHS1Q96JQ0 3298 aa12.41□□□□□ -0.42
CLCF1-202ENST00000533438 SMIM28A0A1B0GU29 152 aa12.4□□□□□ -0.42
CLCF1-202ENST00000533438 SFI1A8K8P3 1242 aa12.4□□□□□ -0.42
CLCF1-202ENST00000533438 SLC16A4O15374 487 aa12.4□□□□□ -0.42
CLCF1-202ENST00000533438 ZMYND10O75800 440 aa12.4□□□□□ -0.42
CLCF1-202ENST00000533438 PDIA4P13667 645 aaKnown RBP12.4□□□□□ -0.42
CLCF1-202ENST00000533438 PDCP20941 246 aa12.4□□□□□ -0.42
CLCF1-202ENST00000533438 CLCNKBP51801 687 aa12.4□□□□□ -0.42
CLCF1-202ENST00000533438 SOX4Q06945 474 aaPredicted RBP12.4□□□□□ -0.42
CLCF1-202ENST00000533438 PSMD5Q16401 504 aa12.4□□□□□ -0.42
CLCF1-202ENST00000533438 UPP1Q16831 310 aa12.4□□□□□ -0.42
CLCF1-202ENST00000533438 ZNF568Q3ZCX4 644 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms