RNA–Protein interactions for RNA: ENST00000533308.1

COMMD9-207, Transcript of COMM domain containing 9, humanhuman

TSL 3

Gene COMMD9, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-207ENST00000533308 CEP135Q66GS9 1140 aa8.59□□□□□ -1.03
COMMD9-207ENST00000533308 SLFN12LQ6IEE8 588 aa8.59□□□□□ -1.03
COMMD9-207ENST00000533308 SASS6Q6UVJ0 657 aa8.59□□□□□ -1.03
COMMD9-207ENST00000533308 GLB1LQ6UWU2 654 aa8.59□□□□□ -1.03
COMMD9-207ENST00000533308 TMEM173Q86WV6 379 aaPredicted RBP8.59□□□□□ -1.03
COMMD9-207ENST00000533308 ZNF280BQ86YH2 543 aa8.59□□□□□ -1.03
COMMD9-207ENST00000533308 BRSK2Q8IWQ3 736 aa8.59□□□□□ -1.03
COMMD9-207ENST00000533308 C12orf56Q8IXR9 622 aa8.59□□□□□ -1.03
COMMD9-207ENST00000533308 ZC3H3Q8IXZ2 948 aaKnown RBP8.59□□□□□ -1.03
COMMD9-207ENST00000533308 XXYLT1Q8NBI6 393 aa8.59□□□□□ -1.03
COMMD9-207ENST00000533308 PHOSPHO2Q8TCD6 241 aa8.59□□□□□ -1.03
COMMD9-207ENST00000533308 SP7Q8TDD2 431 aaPredicted RBP8.59□□□□□ -1.03
COMMD9-207ENST00000533308 BCL7CQ8WUZ0 217 aaPredicted RBP8.59□□□□□ -1.03
COMMD9-207ENST00000533308 SYAP1Q96A49 352 aaPredicted RBP8.59□□□□□ -1.03
COMMD9-207ENST00000533308 C18orf25Q96B23 403 aaPredicted RBP8.59□□□□□ -1.03
COMMD9-207ENST00000533308 PGBD4Q96DM1 585 aa8.59□□□□□ -1.03
COMMD9-207ENST00000533308 FAM212AQ96EL1 285 aa8.59□□□□□ -1.03
COMMD9-207ENST00000533308 DHTKD1Q96HY7 919 aaPredicted RBP8.59□□□□□ -1.03
COMMD9-207ENST00000533308 FBXL18Q96ME1 805 aa8.59□□□□□ -1.03
COMMD9-207ENST00000533308 ACAP3Q96P50 834 aa8.59□□□□□ -1.03
COMMD9-207ENST00000533308 PAAF1Q9BRP4 392 aa8.59□□□□□ -1.03
COMMD9-207ENST00000533308 CCDC94Q9BW85 323 aaPredicted RBP8.59□□□□□ -1.03
COMMD9-207ENST00000533308 TMEM117Q9H0C3 514 aa8.59□□□□□ -1.03
COMMD9-207ENST00000533308 MTIF3Q9H2K0 278 aaKnown RBP8.59□□□□□ -1.03
COMMD9-207ENST00000533308 NKX2-4Q9H2Z4 354 aa8.59□□□□□ -1.03
COMMD9-207ENST00000533308 TBC1D13Q9NVG8 400 aa8.59□□□□□ -1.03
COMMD9-207ENST00000533308 DMAC2Q9NW81 257 aa8.59□□□□□ -1.03
COMMD9-207ENST00000533308 RBAKQ9NYW8 714 aaPredicted RBP8.59□□□□□ -1.03
COMMD9-207ENST00000533308 DNAJB4Q9UDY4 337 aa8.59□□□□□ -1.03
COMMD9-207ENST00000533308 SCN1AP35498 2009 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 TTC26A0AVF1 554 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 LINC01553A4QN01 128 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 CASTOR2A6NHX0 329 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 PPEF2O14830 753 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 INPPL1O15357 1258 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 EXOC3O60645 756 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 CLTAP09496 248 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 SKIP12755 728 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 DNAJB2P25686 324 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 DLG4P78352 724 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 PPP2R3AQ06190 1150 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 CYP24A1Q07973 514 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 BTG3Q14201 252 aaPredicted RBP8.58□□□□□ -1.04
COMMD9-207ENST00000533308 SKOR2Q2VWA4 1001 aaPredicted RBP8.58□□□□□ -1.04
COMMD9-207ENST00000533308 EDRF1Q3B7T1 1238 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 HSP90AA4PQ58FG1 418 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 XKR4Q5GH76 650 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 C1orf220Q5T0J3 134 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 JADE1Q6IE81 842 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 ALKAL1Q6UXT8 129 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 SLC9A9Q8IVB4 645 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 CMTR2Q8IYT2 770 aaKnown RBP8.58□□□□□ -1.04
COMMD9-207ENST00000533308 ABI1Q8IZP0 508 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 LRRC43Q8N309 656 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 MLKLQ8NB16 471 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 GOLGA5Q8TBA6 731 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 LRCH3Q96II8 777 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 PPP1R10Q96QC0 940 aaKnown RBP8.58□□□□□ -1.04
COMMD9-207ENST00000533308 RPS6KC1Q96S38 1066 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 POP1Q99575 1024 aaKnown RBP8.58□□□□□ -1.04
COMMD9-207ENST00000533308 TSG101Q99816 390 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 C17orf80Q9BSJ5 609 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 ZBED2Q9BTP6 218 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 CWH43Q9H720 699 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 NRDE2Q9H7Z3 1164 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 RPF1Q9H9Y2 349 aaKnown RBP8.58□□□□□ -1.04
COMMD9-207ENST00000533308 CERS4Q9HA82 394 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 PDE11AQ9HCR9 933 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 ANO10Q9NW15 660 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 CNTN3Q9P232 1028 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 RWDD2AQ9UIY3 292 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 MTUS1Q9ULD2 1270 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 GIT1Q9Y2X7 761 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 VWA8A3KMH1 1905 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 CHD7Q9P2D1 2997 aa8.58□□□□□ -1.04
COMMD9-207ENST00000533308 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.57□□□□□ -1.04
COMMD9-207ENST00000533308 SMIM28A0A1B0GU29 152 aa8.57□□□□□ -1.04
COMMD9-207ENST00000533308 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.57□□□□□ -1.04
COMMD9-207ENST00000533308 EPOPA6NHQ4 379 aa8.57□□□□□ -1.04
COMMD9-207ENST00000533308 LRRIQ3A6PVS8 624 aaPredicted RBP8.57□□□□□ -1.04
COMMD9-207ENST00000533308 NT5C1B-RDH14C9J2C7 533 aa8.57□□□□□ -1.04
COMMD9-207ENST00000533308 ZC3H11AO75152 810 aaKnown RBP eCLIP8.57□□□□□ -1.04
COMMD9-207ENST00000533308 CSPG5O95196 566 aa8.57□□□□□ -1.04
COMMD9-207ENST00000533308 KIF20AO95235 890 aa8.57□□□□□ -1.04
COMMD9-207ENST00000533308 ITGB1P05556 798 aa8.57□□□□□ -1.04
COMMD9-207ENST00000533308 TRIM49P0CI25 452 aa8.57□□□□□ -1.04
COMMD9-207ENST00000533308 TRIM49CP0CI26 452 aa8.57□□□□□ -1.04
COMMD9-207ENST00000533308 KCNE1P15382 129 aa8.57□□□□□ -1.04
COMMD9-207ENST00000533308 SLC11A1P49279 550 aa8.57□□□□□ -1.04
COMMD9-207ENST00000533308 YARSP54577 528 aaKnown RBP8.57□□□□□ -1.04
COMMD9-207ENST00000533308 SNRPFP62306 86 aaKnown RBP8.57□□□□□ -1.04
COMMD9-207ENST00000533308 TAP1Q03518 808 aa8.57□□□□□ -1.04
COMMD9-207ENST00000533308 LRRC63Q05C16 580 aa8.57□□□□□ -1.04
COMMD9-207ENST00000533308 GRIK3Q13003 919 aa8.57□□□□□ -1.04
COMMD9-207ENST00000533308 ADAM9Q13443 819 aa8.57□□□□□ -1.04
COMMD9-207ENST00000533308 STIM1Q13586 685 aa8.57□□□□□ -1.04
COMMD9-207ENST00000533308 NFIL3Q16649 462 aa8.57□□□□□ -1.04
COMMD9-207ENST00000533308 APBB1IPQ7Z5R6 666 aaPredicted RBP8.57□□□□□ -1.04
COMMD9-207ENST00000533308 IRF2BP1Q8IU81 584 aa8.57□□□□□ -1.04
COMMD9-207ENST00000533308 HACE1Q8IYU2 909 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms