RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, human

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-223	ENST00000532793	PRKCB	P05771	671 aa		10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	TH	P07101	528 aa		10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	MYB	P10242	640 aa		10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	RPA1	P27694	616 aa		10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	HMGN5	P82970	282 aa	Known RBP	10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	ELAVL2	Q12926	359 aa	Known RBP	10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	TUSC3	Q13454	348 aa		10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	HSP90AA2P	Q14568	343 aa	Predicted RBP	10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	ZNF174	Q15697	407 aa		10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	AMHR2	Q16671	573 aa		10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	LIN9	Q5TKA1	542 aa		10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	KIAA0319	Q5VV43	1072 aa		10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	ERICH6B	Q5W0A0	696 aa		10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	PDXDC1	Q6P996	788 aa		10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	PADI6	Q6TGC4	694 aa		10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	CEP57	Q86XR8	500 aa		10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	CCDC83	Q8IWF9	413 aa		10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	GPR65	Q8IYL9	337 aa		10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	PHOX2B	Q99453	314 aa		10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	LLPH	Q9BRT6	129 aa	Known RBP	10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	POLR3C	Q9BUI4	534 aa	Predicted RBP	10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	FOXP1	Q9H334	677 aa	Predicted RBP	10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	SMOC2	Q9H3U7	446 aa		10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	KCNK12	Q9HB15	430 aa		10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	RXFP1	Q9HBX9	757 aa		10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	WDR6	Q9NNW5	1121 aa	Known RBP	10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	GPRC5C	Q9NQ84	441 aa		10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	MIOS	Q9NXC5	875 aa		10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	ZDHHC7	Q9NXF8	308 aa		10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	FNIP2	Q9P278	1114 aa		10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	DUSP12	Q9UNI6	340 aa		10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	TRIP11	Q15643	1979 aa		10.63	□□□□□ -0.71
PPFIA1-223	ENST00000532793	CASTOR2	A6NHX0	329 aa		10.62	□□□□□ -0.71
PPFIA1-223	ENST00000532793	MED24	O75448	989 aa		10.62	□□□□□ -0.71
PPFIA1-223	ENST00000532793	C1R	P00736	705 aa		10.62	□□□□□ -0.71
PPFIA1-223	ENST00000532793	SPATA31D3	P0C874	917 aa		10.62	□□□□□ -0.71
PPFIA1-223	ENST00000532793	MUT	P22033	750 aa		10.62	□□□□□ -0.71
PPFIA1-223	ENST00000532793	CCT6A	P40227	531 aa	Known RBP	10.62	□□□□□ -0.71
PPFIA1-223	ENST00000532793	NAMPT	P43490	491 aa		10.62	□□□□□ -0.71
PPFIA1-223	ENST00000532793	RBM25	P49756	843 aa	Known RBP	10.62	□□□□□ -0.71
PPFIA1-223	ENST00000532793	CLCN5	P51795	746 aa		10.62	□□□□□ -0.71
PPFIA1-223	ENST00000532793	FAM187B	Q17R55	369 aa		10.62	□□□□□ -0.71
PPFIA1-223	ENST00000532793	DCAF4L1	Q3SXM0	396 aa		10.62	□□□□□ -0.71
PPFIA1-223	ENST00000532793	TTC38	Q5R3I4	469 aa		10.62	□□□□□ -0.71
PPFIA1-223	ENST00000532793	CDCA2	Q69YH5	1023 aa	Predicted RBP	10.62	□□□□□ -0.71
PPFIA1-223	ENST00000532793	SPATA31D4	Q6ZUB0	917 aa		10.62	□□□□□ -0.71
PPFIA1-223	ENST00000532793	GET4	Q7L5D6	327 aa	Predicted RBP	10.62	□□□□□ -0.71
PPFIA1-223	ENST00000532793	TAS1R1	Q7RTX1	841 aa		10.62	□□□□□ -0.71
PPFIA1-223	ENST00000532793	RNF168	Q8IYW5	571 aa	Predicted RBP	10.62	□□□□□ -0.71
PPFIA1-223	ENST00000532793	TMEM105	Q8N8V8	129 aa		10.62	□□□□□ -0.71
PPFIA1-223	ENST00000532793	HASPIN	Q8TF76	798 aa		10.62	□□□□□ -0.71
PPFIA1-223	ENST00000532793	NXPE3	Q969Y0	559 aa		10.62	□□□□□ -0.71
PPFIA1-223	ENST00000532793	B3GALT6	Q96L58	329 aa		10.62	□□□□□ -0.71
PPFIA1-223	ENST00000532793	ZSCAN31	Q96LW9	406 aa	Predicted RBP	10.62	□□□□□ -0.71
PPFIA1-223	ENST00000532793	RTP3	Q9BQQ7	232 aa		10.62	□□□□□ -0.71
PPFIA1-223	ENST00000532793	RHOBTB2	Q9BYZ6	727 aa		10.62	□□□□□ -0.71
PPFIA1-223	ENST00000532793	TMEM60	Q9H2L4	133 aa		10.62	□□□□□ -0.71
PPFIA1-223	ENST00000532793	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	10.62	□□□□□ -0.71
PPFIA1-223	ENST00000532793	CIT	O14578	2027 aa		10.62	□□□□□ -0.71
PPFIA1-223	ENST00000532793	C5orf42	Q9H799	3197 aa		10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793	MYH15	Q9Y2K3	1946 aa		10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793		F8W810	466 aa		10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793	ACKR2	O00590	384 aa		10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793	WNT7A	O00755	349 aa		10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793	TGM5	O43548	720 aa		10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793	RFPL2	O75678	378 aa		10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793	RECQL4	O94761	1208 aa		10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793	SPATA31C1	P0DKV0	1188 aa		10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793	CYP11B2	P19099	503 aa		10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793	TRAPPC10	P48553	1259 aa		10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793	EFNA5	P52803	228 aa		10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793	YARS	P54577	528 aa	Known RBP	10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793	PSMD5	Q16401	504 aa		10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793	PKDCC	Q504Y2	493 aa		10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793	PPM1L	Q5SGD2	360 aa		10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793	C6orf132	Q5T0Z8	1188 aa		10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793	FAM171A1	Q5VUB5	890 aa		10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793	SIX5	Q8N196	739 aa		10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793	RABGGTA	Q92696	567 aa		10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793	KIFAP3	Q92845	792 aa		10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793	TTPAL	Q9BTX7	342 aa		10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793	GPR62	Q9BZJ7	368 aa		10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793	FZD8	Q9H461	694 aa		10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793	PDZD7	Q9H5P4	517 aa		10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793	SH2B1	Q9NRF2	756 aa	Predicted RBP	10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793	CHST7	Q9NS84	486 aa		10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793	SNTG2	Q9NY99	539 aa		10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793	STK17A	Q9UEE5	414 aa		10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793	LRWD1	Q9UFC0	647 aa		10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793	POLI	Q9UNA4	740 aa		10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793	KIF3A	Q9Y496	699 aa		10.61	□□□□□ -0.71
PPFIA1-223	ENST00000532793	PHLPP2	Q6ZVD8	1323 aa		10.6	□□□□□ -0.71
PPFIA1-223	ENST00000532793	TRAPPC3	O43617	180 aa		10.6	□□□□□ -0.71
PPFIA1-223	ENST00000532793	XYLB	O75191	536 aa		10.6	□□□□□ -0.71
PPFIA1-223	ENST00000532793	ZMYND10	O75800	440 aa		10.6	□□□□□ -0.71
PPFIA1-223	ENST00000532793	CFH	P08603	1231 aa		10.6	□□□□□ -0.71
PPFIA1-223	ENST00000532793	RPL17	P18621	184 aa	Known RBP	10.6	□□□□□ -0.71
PPFIA1-223	ENST00000532793	AOC1	P19801	751 aa		10.6	□□□□□ -0.71
PPFIA1-223	ENST00000532793	PRSS55	Q6UWB4	352 aa	Predicted RBP	10.6	□□□□□ -0.71
PPFIA1-223	ENST00000532793	NOSTRIN	Q8IVI9	506 aa		10.6	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms