RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 EFCAB12Q6NXP0 572 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 ENOSF1Q7L5Y1 443 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 NAF1Q96HR8 494 aaKnown RBP9.25□□□□□ -0.93
CTNND1-232ENST00000532649 RMDN2Q96LZ7 410 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 MYCBPQ99417 103 aaPredicted RBP9.25□□□□□ -0.93
CTNND1-232ENST00000532649 TMEM60Q9H2L4 133 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 PPP2R3BQ9Y5P8 575 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 KIAA0391O15091 583 aaKnown RBP9.25□□□□□ -0.93
CTNND1-232ENST00000532649 TRPA1O75762 1119 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 RGS2P41220 211 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 WDR72Q3MJ13 1102 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 OR9Q1Q8NGQ5 310 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 PGBD4Q96DM1 585 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 NUP85Q9BW27 656 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 AGAP1Q9UPQ3 857 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 HPS5Q9UPZ3 1129 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 TEX33O43247 280 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 FDPSP14324 419 aaKnown RBP9.24□□□□□ -0.93
CTNND1-232ENST00000532649 TCF7P36402 384 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-232ENST00000532649 LAMC2Q13753 1193 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 DCAF4L1Q3SXM0 396 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 RASIP1Q5U651 963 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 CC2D1AQ6P1N0 951 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-232ENST00000532649 FAM180AQ6UWF9 173 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 ZNF564Q8TBZ8 553 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-232ENST00000532649 SCG3Q8WXD2 468 aaKnown RBP9.24□□□□□ -0.93
CTNND1-232ENST00000532649 RBM41Q96IZ5 413 aaKnown RBP9.24□□□□□ -0.93
CTNND1-232ENST00000532649 EHD4Q9H223 541 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 KCND2Q9NZV8 630 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 PCSK1NQ9UHG2 260 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 MYMKA6NI61 221 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 HBP1O60381 514 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 ZRANB2O95218 330 aaKnown RBP eCLIP9.24□□□□□ -0.937e-11■■■■■ 70
CTNND1-232ENST00000532649 ARIH2O95376 493 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 MYBP10242 640 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 EPHB4P54760 987 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 GNGT1P63211 74 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 NME3Q13232 169 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 MED21Q13503 144 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 BBS9Q3SYG4 887 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 PCGF5Q86SE9 256 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 SPATS2Q86XZ4 545 aaKnown RBP9.24□□□□□ -0.93
CTNND1-232ENST00000532649 C7orf25Q9BPX7 421 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 CENPKQ9BS16 269 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 HEMGNQ9BXL5 484 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 UPF3AQ9H1J1 476 aaKnown RBP9.24□□□□□ -0.93
CTNND1-232ENST00000532649 SENP1Q9P0U3 644 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 HEY1Q9Y5J3 304 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 MROH1Q8NDA8 1641 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 ARHGEF9O43307 516 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 CTDNEP1O95476 244 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 ADCY1Q08828 1119 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 VEPH1Q14D04 833 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 ACCSLQ4AC99 568 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 TEX9Q8N6V9 391 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 GPRASP2Q96D09 838 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 TNIP3Q96KP6 325 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 LBHD1Q9BQE6 289 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-232ENST00000532649 MTIF3Q9H2K0 278 aaKnown RBP9.24□□□□□ -0.93
CTNND1-232ENST00000532649 TRAPPC3O43617 180 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 MOCS2O96007 188 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-232ENST00000532649 FTLP02792 175 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-232ENST00000532649 TCF3P15923 654 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 VCAM1P19320 739 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 TMEM132DQ14C87 1099 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 FAM102AQ5T9C2 384 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-232ENST00000532649 MAP1SQ66K74 1059 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-232ENST00000532649 PLEKHH3Q7Z736 793 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 ASAP2O43150 1006 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 SLC26A4O43511 780 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 E2F6O75461 281 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 SERPINI2O75830 405 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 PGK2P07205 417 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 NCF2P19878 526 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-232ENST00000532649 TMED2Q15363 201 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 FAM117BQ6P1L5 589 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 RNF180Q86T96 592 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 DHX40Q8IX18 779 aaKnown RBP9.24□□□□□ -0.93
CTNND1-232ENST00000532649 ABTB1Q969K4 478 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-232ENST00000532649 KLHL8Q9P2G9 620 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-232ENST00000532649 L3MBTL1Q9Y468 752 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 SNX9Q9Y5X1 595 aa9.24□□□□□ -0.93
CTNND1-232ENST00000532649 RGL2O15211 777 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 SLC16A3O15427 465 aaKnown RBP9.23□□□□□ -0.93
CTNND1-232ENST00000532649 TADA2AO75478 443 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 SLC8A1P32418 973 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 TAF1BQ53T94 588 aaPredicted RBP9.23□□□□□ -0.93
CTNND1-232ENST00000532649 KCTD16Q68DU8 428 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 MMS22LQ6ZRQ5 1243 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 EFHBQ8N7U6 833 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 PHF21AQ96BD5 680 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 FAF2Q96CS3 445 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 FGFR1OP2Q9NVK5 253 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 LCMT1Q9UIC8 334 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 TTC26A0AVF1 554 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 MIF4GDA9UHW6 222 aaKnown RBP9.23□□□□□ -0.93
CTNND1-232ENST00000532649 HSPA1AP0DMV8 641 aaKnown RBP9.23□□□□□ -0.93
CTNND1-232ENST00000532649 HSPA1BP0DMV9 641 aaKnown RBP9.23□□□□□ -0.93
CTNND1-232ENST00000532649 LCP1P13796 627 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 DHX9Q08211 1270 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms