RNA–Protein interactions for RNA: ENST00000532461.5

RDX-213, Transcript of radixin, humanhuman

TSL 1 (best)

Gene RDX, Length 3,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-213ENST00000532461 ZNF473Q8WTR7 871 aaKnown RBP6.22□□□□□ -1.41
RDX-213ENST00000532461 ATXN2LQ8WWM7 1075 aaKnown RBP6.22□□□□□ -1.41
RDX-213ENST00000532461 ZNF516Q92618 1163 aa6.22□□□□□ -1.41
RDX-213ENST00000532461 KRT35Q92764 455 aa6.22□□□□□ -1.41
RDX-213ENST00000532461 ZNF317Q96PQ6 595 aaPredicted RBP6.22□□□□□ -1.41
RDX-213ENST00000532461 FOXP3Q9BZS1 431 aa6.22□□□□□ -1.41
RDX-213ENST00000532461 EFCC1Q9HA90 598 aa6.22□□□□□ -1.41
RDX-213ENST00000532461 ZNF277Q9NRM2 450 aaPredicted RBP6.22□□□□□ -1.41
RDX-213ENST00000532461 HOMER3Q9NSC5 361 aa6.22□□□□□ -1.41
RDX-213ENST00000532461 EURLQ9NYK6 297 aa6.22□□□□□ -1.41
RDX-213ENST00000532461 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.22□□□□□ -1.41
RDX-213ENST00000532461 FAM169AQ9Y6X4 670 aa6.22□□□□□ -1.41
RDX-213ENST00000532461 POLR2AP24928 1970 aaKnown RBP6.22□□□□□ -1.41
RDX-213ENST00000532461 MEFVO15553 781 aaPredicted RBP6.21□□□□□ -1.41
RDX-213ENST00000532461 ASAP2O43150 1006 aa6.21□□□□□ -1.41
RDX-213ENST00000532461 PSTPIP1O43586 416 aa6.21□□□□□ -1.41
RDX-213ENST00000532461 AGTP01019 485 aa6.21□□□□□ -1.41
RDX-213ENST00000532461 MMEP08473 750 aa6.21□□□□□ -1.41
RDX-213ENST00000532461 POTEJP0CG39 1038 aa6.21□□□□□ -1.41
RDX-213ENST00000532461 PYGMP11217 842 aa6.21□□□□□ -1.41
RDX-213ENST00000532461 AP3M2P53677 418 aa6.21□□□□□ -1.41
RDX-213ENST00000532461 PMS2P54278 862 aa6.21□□□□□ -1.41
RDX-213ENST00000532461 CEP85LQ5SZL2 805 aa6.21□□□□□ -1.41
RDX-213ENST00000532461 PLEKHA7Q6IQ23 1121 aa6.21□□□□□ -1.41
RDX-213ENST00000532461 CATSPERGQ6ZRH7 1159 aa6.21□□□□□ -1.41
RDX-213ENST00000532461 SV2AQ7L0J3 742 aa6.21□□□□□ -1.41
RDX-213ENST00000532461 HOOK3Q86VS8 718 aa6.21□□□□□ -1.41
RDX-213ENST00000532461 DDX42Q86XP3 938 aaKnown RBP eCLIP6.21□□□□□ -1.41
RDX-213ENST00000532461 DNAAF5Q86Y56 855 aa6.21□□□□□ -1.41
RDX-213ENST00000532461 MCOLN2Q8IZK6 566 aa6.21□□□□□ -1.41
RDX-213ENST00000532461 SH2D3CQ8N5H7 860 aa6.21□□□□□ -1.41
RDX-213ENST00000532461 ZNF564Q8TBZ8 553 aaPredicted RBP6.21□□□□□ -1.41
RDX-213ENST00000532461 TATDN2Q93075 761 aa6.21□□□□□ -1.41
RDX-213ENST00000532461 RNF25Q96BH1 459 aaPredicted RBP6.21□□□□□ -1.41
RDX-213ENST00000532461 DDX27Q96GQ7 796 aaKnown RBP6.21□□□□□ -1.41
RDX-213ENST00000532461 CCT8L2Q96SF2 557 aa6.21□□□□□ -1.41
RDX-213ENST00000532461 CELF4Q9BZC1 486 aaKnown RBP6.21□□□□□ -1.41
RDX-213ENST00000532461 PORCNQ9H237 461 aa6.21□□□□□ -1.41
RDX-213ENST00000532461 FAM124BQ9H5Z6 455 aaPredicted RBP6.21□□□□□ -1.41
RDX-213ENST00000532461 RPAP3Q9H6T3 665 aaPredicted RBP6.21□□□□□ -1.41
RDX-213ENST00000532461 AS3MTQ9HBK9 375 aa6.21□□□□□ -1.41
RDX-213ENST00000532461 CYP26B1Q9NR63 512 aa6.21□□□□□ -1.41
RDX-213ENST00000532461 CYP39A1Q9NYL5 469 aa6.21□□□□□ -1.41
RDX-213ENST00000532461 ZBTB12Q9Y330 459 aaPredicted RBP6.21□□□□□ -1.41
RDX-213ENST00000532461 PCDHB2Q9Y5E7 798 aa6.21□□□□□ -1.41
RDX-213ENST00000532461 COL4A4P53420 1690 aaPredicted RBP6.21□□□□□ -1.42
RDX-213ENST00000532461 CNTNAP2Q9UHC6 1331 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 GMNCA6NCL1 334 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 SLC16A4O15374 487 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 LRRN2O75325 713 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 NR3C2P08235 984 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 PTPRAP18433 802 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 NAMPTP43490 491 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 RPL21P46778 160 aaKnown RBP6.21□□□□□ -1.42
RDX-213ENST00000532461 PEX3P56589 373 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 RWDD2BP57060 319 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 RASA2Q15283 850 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 XKR3Q5GH77 459 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 LRRC38Q5VT99 294 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 CDCA2Q69YH5 1023 aaPredicted RBP6.21□□□□□ -1.42
RDX-213ENST00000532461 PIGWQ7Z7B1 504 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 KATNAL2Q8IYT4 538 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 NSUN6Q8TEA1 469 aaKnown RBP6.21□□□□□ -1.42
RDX-213ENST00000532461 KAT5Q92993 513 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 NT5C1BQ96P26 610 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 NUP85Q9BW27 656 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 CCDC113Q9H0I3 377 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 RAVER2Q9HCJ3 691 aaKnown RBP6.21□□□□□ -1.42
RDX-213ENST00000532461 POLD4Q9HCU8 107 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 AAASQ9NRG9 546 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 CNOT8Q9UFF9 292 aaKnown RBP6.21□□□□□ -1.42
RDX-213ENST00000532461 LGALS13Q9UHV8 139 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 LOC102724159A0A0B4J2E5 919 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 DENND3A2RUS2 1198 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 GOLGA6L10A6NI86 522 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 TMCO5BA8MYB1 307 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 TRIM66O15016 1216 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 SORBS3O60504 671 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 VNN1O95497 513 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 OAS1P00973 400 aaKnown RBP6.21□□□□□ -1.42
RDX-213ENST00000532461 SUPT20HL2P0C7V6 817 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 GHRP10912 638 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 ITIH2P19823 946 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 ATP4AP20648 1035 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 RFC5P40937 340 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 MARCKSL1P49006 195 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 PDE6CP51160 858 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 SLC18A1P54219 525 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 LMNB2Q03252 620 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 DHX9Q08211 1270 aaKnown RBP6.21□□□□□ -1.42
RDX-213ENST00000532461 ADCY2Q08462 1091 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 PDCLQ13371 301 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 PWP2Q15269 919 aaKnown RBP6.21□□□□□ -1.42
RDX-213ENST00000532461 SUPT20HL1Q3ZLR7 823 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 C6orf118Q5T5N4 469 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 DCAF15Q66K64 600 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 SLFN12LQ6IEE8 588 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 MICALCLQ6ZW33 695 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 MIGA2Q7L4E1 593 aa6.21□□□□□ -1.42
RDX-213ENST00000532461 GPIHBP1Q8IV16 184 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms