RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 TTC26A0AVF1 554 aa15.23■□□□□ 0.03
TSPAN4-220ENST00000532375 OGTO15294 1046 aa15.23■□□□□ 0.03
TSPAN4-220ENST00000532375 LILRB3O75022 631 aa15.23■□□□□ 0.03
TSPAN4-220ENST00000532375 PRPF6O94906 941 aaKnown RBP15.23■□□□□ 0.03
TSPAN4-220ENST00000532375 ZNF202O95125 648 aa15.23■□□□□ 0.03
TSPAN4-220ENST00000532375 GCNT3O95395 438 aa15.23■□□□□ 0.03
TSPAN4-220ENST00000532375 THP07101 528 aa15.23■□□□□ 0.03
TSPAN4-220ENST00000532375 HARSP12081 509 aaKnown RBP15.23■□□□□ 0.03
TSPAN4-220ENST00000532375 KCNE1P15382 129 aa15.23■□□□□ 0.03
TSPAN4-220ENST00000532375 GTF2F1P35269 517 aaKnown RBP eCLIP15.23■□□□□ 0.036e-7■■■■■ 38.6
TSPAN4-220ENST00000532375 LTBRP36941 435 aa15.23■□□□□ 0.03
TSPAN4-220ENST00000532375 LIG4P49917 911 aa15.23■□□□□ 0.03
TSPAN4-220ENST00000532375 SOX4Q06945 474 aaPredicted RBP15.23■□□□□ 0.03
TSPAN4-220ENST00000532375 TUSC3Q13454 348 aa15.23■□□□□ 0.03
TSPAN4-220ENST00000532375 ZBTB6Q15916 424 aa15.23■□□□□ 0.03
TSPAN4-220ENST00000532375 CRELD2Q6UXH1 353 aaPredicted RBP15.23■□□□□ 0.03
TSPAN4-220ENST00000532375 KRBA2Q6ZNG9 492 aa15.23■□□□□ 0.03
TSPAN4-220ENST00000532375 APBB1IPQ7Z5R6 666 aaPredicted RBP15.23■□□□□ 0.03
TSPAN4-220ENST00000532375 FMR1NBQ8N0W7 255 aaPredicted RBP15.23■□□□□ 0.03
TSPAN4-220ENST00000532375 ZSWIM2Q8NEG5 633 aa15.23■□□□□ 0.03
TSPAN4-220ENST00000532375 ZNF507Q8TCN5 953 aa15.23■□□□□ 0.03
TSPAN4-220ENST00000532375 RABGGTAQ92696 567 aa15.23■□□□□ 0.03
TSPAN4-220ENST00000532375 FAM193BQ96PV7 902 aaPredicted RBP15.23■□□□□ 0.03
TSPAN4-220ENST00000532375 ZBP1Q9H171 429 aa15.23■□□□□ 0.03
TSPAN4-220ENST00000532375 CNTN3Q9P232 1028 aa15.23■□□□□ 0.03
TSPAN4-220ENST00000532375 CPSF3Q9UKF6 684 aaKnown RBP15.23■□□□□ 0.03
TSPAN4-220ENST00000532375 PCDHB13Q9Y5F0 798 aa15.23■□□□□ 0.03
TSPAN4-220ENST00000532375 XIRP2A4UGR9 3374 aa15.23■□□□□ 0.03
TSPAN4-220ENST00000532375 CARNS1A5YM72 827 aa15.22■□□□□ 0.03
TSPAN4-220ENST00000532375 HIDE1A8MVS5 230 aa15.22■□□□□ 0.03
TSPAN4-220ENST00000532375 CLTAP09496 248 aa15.22■□□□□ 0.03
TSPAN4-220ENST00000532375 PRR29P0C7W0 189 aa15.22■□□□□ 0.03
TSPAN4-220ENST00000532375 OR1G1P47890 313 aa15.22■□□□□ 0.03
TSPAN4-220ENST00000532375 KRT17Q04695 432 aa15.22■□□□□ 0.03
TSPAN4-220ENST00000532375 ALCAMQ13740 583 aa15.22■□□□□ 0.03
TSPAN4-220ENST00000532375 KCNC3Q14003 757 aa15.22■□□□□ 0.03
TSPAN4-220ENST00000532375 ENOX2Q16206 610 aaKnown RBP15.22■□□□□ 0.03
TSPAN4-220ENST00000532375 GLRA4Q5JXX5 417 aa15.22■□□□□ 0.03
TSPAN4-220ENST00000532375 FAM26FQ5R3K3 315 aa15.22■□□□□ 0.03
TSPAN4-220ENST00000532375 PDE12Q6L8Q7 609 aaKnown RBP15.22■□□□□ 0.03
TSPAN4-220ENST00000532375 TAS1R1Q7RTX1 841 aa15.22■□□□□ 0.03
TSPAN4-220ENST00000532375 CEP57L1Q8IYX8 460 aa15.22■□□□□ 0.03
TSPAN4-220ENST00000532375 MRPL43Q8N983 215 aaKnown RBP15.22■□□□□ 0.03
TSPAN4-220ENST00000532375 SCFD1Q8WVM8 642 aa15.22■□□□□ 0.03
TSPAN4-220ENST00000532375 BICD1Q96G01 975 aa15.22■□□□□ 0.03
TSPAN4-220ENST00000532375 TMEM169Q96HH4 297 aa15.22■□□□□ 0.03
TSPAN4-220ENST00000532375 ACCSQ96QU6 501 aa15.22■□□□□ 0.03
TSPAN4-220ENST00000532375 RPS6KC1Q96S38 1066 aa15.22■□□□□ 0.03
TSPAN4-220ENST00000532375 TSHZ2Q9NRE2 1034 aa15.22■□□□□ 0.03
TSPAN4-220ENST00000532375 PUF60Q9UHX1 559 aaKnown RBP15.22■□□□□ 0.03
TSPAN4-220ENST00000532375 PRG3Q9Y2Y8 225 aaPredicted RBP15.22■□□□□ 0.03
TSPAN4-220ENST00000532375 IRAK3Q9Y616 596 aa15.22■□□□□ 0.03
TSPAN4-220ENST00000532375 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.21■□□□□ 0.03
TSPAN4-220ENST00000532375 GADD45BO75293 160 aaPredicted RBP15.21■□□□□ 0.03
TSPAN4-220ENST00000532375 CSPG5O95196 566 aa15.21■□□□□ 0.03
TSPAN4-220ENST00000532375 CXCL8P10145 99 aa15.21■□□□□ 0.03
TSPAN4-220ENST00000532375 CTSAP10619 480 aa15.21■□□□□ 0.03
TSPAN4-220ENST00000532375 DPYDQ12882 1025 aa15.21■□□□□ 0.03
TSPAN4-220ENST00000532375 STK4Q13043 487 aa15.21■□□□□ 0.03
TSPAN4-220ENST00000532375 ADAM15Q13444 863 aa15.21■□□□□ 0.03
TSPAN4-220ENST00000532375 TPRNQ4KMQ1 711 aa15.21■□□□□ 0.03
TSPAN4-220ENST00000532375 SLFN12LQ6IEE8 588 aa15.21■□□□□ 0.03
TSPAN4-220ENST00000532375 VPS52Q8N1B4 723 aa15.21■□□□□ 0.03
TSPAN4-220ENST00000532375 TMEM130Q8N3G9 435 aa15.21■□□□□ 0.03
TSPAN4-220ENST00000532375 TMEM87AQ8NBN3 555 aa15.21■□□□□ 0.03
TSPAN4-220ENST00000532375 TCF25Q9BQ70 676 aa15.21■□□□□ 0.03
TSPAN4-220ENST00000532375 MSTO1Q9BUK6 570 aa15.21■□□□□ 0.03
TSPAN4-220ENST00000532375 GPR62Q9BZJ7 368 aa15.21■□□□□ 0.03
TSPAN4-220ENST00000532375 PLEKHA5Q9HAU0 1116 aa15.21■□□□□ 0.03
TSPAN4-220ENST00000532375 NGRNQ9NPE2 291 aaKnown RBP15.21■□□□□ 0.03
TSPAN4-220ENST00000532375 TOPORSQ9NS56 1045 aaPredicted RBP15.21■□□□□ 0.03
TSPAN4-220ENST00000532375 CHST7Q9NS84 486 aa15.21■□□□□ 0.03
TSPAN4-220ENST00000532375 VWA8A3KMH1 1905 aa15.21■□□□□ 0.02
TSPAN4-220ENST00000532375 C2orf71A6NGG8 1288 aa15.2■□□□□ 0.02
TSPAN4-220ENST00000532375 CASTOR2A6NHX0 329 aa15.2■□□□□ 0.02
TSPAN4-220ENST00000532375 LACTBL1A8MY62 500 aa15.2■□□□□ 0.02
TSPAN4-220ENST00000532375 EIF3DO15371 548 aaKnown RBP eCLIP15.2■□□□□ 0.02
TSPAN4-220ENST00000532375 LINC01565O15544 149 aa15.2■□□□□ 0.02
TSPAN4-220ENST00000532375 TGFB1I1O43294 461 aa15.2■□□□□ 0.02
TSPAN4-220ENST00000532375 MYL1P05976 194 aa15.2■□□□□ 0.02
TSPAN4-220ENST00000532375 YARSP54577 528 aaKnown RBP15.2■□□□□ 0.02
TSPAN4-220ENST00000532375 DLX2Q07687 328 aaPredicted RBP15.2■□□□□ 0.02
TSPAN4-220ENST00000532375 UPP1Q16831 310 aa15.2■□□□□ 0.02
TSPAN4-220ENST00000532375 BMT2Q1RMZ1 405 aa15.2■□□□□ 0.02
TSPAN4-220ENST00000532375 KMT5BQ4FZB7 885 aa15.2■□□□□ 0.02
TSPAN4-220ENST00000532375 KIAA0319Q5VV43 1072 aa15.2■□□□□ 0.02
TSPAN4-220ENST00000532375 KIAA0895Q8NCT3 520 aa15.2■□□□□ 0.02
TSPAN4-220ENST00000532375 C3orf58Q8NDZ4 430 aa15.2■□□□□ 0.02
TSPAN4-220ENST00000532375 VN1R2Q8NFZ6 395 aa15.2■□□□□ 0.02
TSPAN4-220ENST00000532375 AUTS2Q8WXX7 1259 aa15.2■□□□□ 0.02
TSPAN4-220ENST00000532375 C18orf25Q96B23 403 aaPredicted RBP15.2■□□□□ 0.02
TSPAN4-220ENST00000532375 PABPC5Q96DU9 382 aaKnown RBP15.2■□□□□ 0.02
TSPAN4-220ENST00000532375 COLEC11Q9BWP8 271 aa15.2■□□□□ 0.02
TSPAN4-220ENST00000532375 GOLGA2P5Q9HBQ8 144 aa15.2■□□□□ 0.02
TSPAN4-220ENST00000532375 AGO2Q9UKV8 859 aaKnown RBP15.2■□□□□ 0.02
TSPAN4-220ENST00000532375 A0A0C4DFX4 3053 aa15.19■□□□□ 0.02
TSPAN4-220ENST00000532375 TMEM189-UBE2V1I3L0A0 370 aa15.19■□□□□ 0.02
TSPAN4-220ENST00000532375 PER2O15055 1255 aa15.19■□□□□ 0.02
TSPAN4-220ENST00000532375 KIF4AO95239 1232 aa15.19■□□□□ 0.02
TSPAN4-220ENST00000532375 CXCL14O95715 111 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms