RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 PGBD4Q96DM1 585 aa6.64□□□□□ -1.35
CASP4-210ENST00000531546 NBPF4Q96M43 638 aa6.64□□□□□ -1.35
CASP4-210ENST00000531546 ADARB2Q9NS39 739 aaKnown RBP6.64□□□□□ -1.35
CASP4-210ENST00000531546 COQ6Q9Y2Z9 468 aa6.64□□□□□ -1.35
CASP4-210ENST00000531546 USP54Q70EL1 1684 aa6.64□□□□□ -1.35
CASP4-210ENST00000531546 VIRMAQ69YN4 1812 aaKnown RBP6.64□□□□□ -1.35
CASP4-210ENST00000531546 CASP8AP2Q9UKL3 1982 aa6.64□□□□□ -1.35
CASP4-210ENST00000531546 GRID2IPA4D2P6 1211 aa6.63□□□□□ -1.35
CASP4-210ENST00000531546 SBF1O95248 1867 aa6.63□□□□□ -1.35
CASP4-210ENST00000531546 MMP10P09238 476 aa6.63□□□□□ -1.35
CASP4-210ENST00000531546 DPEP1P16444 411 aa6.63□□□□□ -1.35
CASP4-210ENST00000531546 C21orf58P58505 322 aa6.63□□□□□ -1.35
CASP4-210ENST00000531546 RASGRF1Q13972 1273 aa6.63□□□□□ -1.35
CASP4-210ENST00000531546 DCAF17Q5H9S7 520 aaPredicted RBP6.63□□□□□ -1.35
CASP4-210ENST00000531546 STRIP1Q5VSL9 837 aa6.63□□□□□ -1.35
CASP4-210ENST00000531546 ZKSCAN2Q63HK3 967 aa6.63□□□□□ -1.35
CASP4-210ENST00000531546 NAIF1Q69YI7 327 aaPredicted RBP6.63□□□□□ -1.35
CASP4-210ENST00000531546 ELOA2Q8IYF1 753 aaPredicted RBP6.63□□□□□ -1.35
CASP4-210ENST00000531546 NKD2Q969F2 451 aaPredicted RBP6.63□□□□□ -1.35
CASP4-210ENST00000531546 ZNF512Q96ME7 567 aaPredicted RBP6.63□□□□□ -1.35
CASP4-210ENST00000531546 DHRS4Q9BTZ2 278 aa6.63□□□□□ -1.35
CASP4-210ENST00000531546 TOR3AQ9H497 397 aa6.63□□□□□ -1.35
CASP4-210ENST00000531546 ARFGEF1Q9Y6D6 1849 aa6.63□□□□□ -1.35
CASP4-210ENST00000531546 POLR3AO14802 1390 aaPredicted RBP6.62□□□□□ -1.35
CASP4-210ENST00000531546 JUNP05412 331 aaKnown RBP6.62□□□□□ -1.35
CASP4-210ENST00000531546 CD38P28907 300 aa6.62□□□□□ -1.35
CASP4-210ENST00000531546 FNTBP49356 437 aa6.62□□□□□ -1.35
CASP4-210ENST00000531546 FOXB2Q5VYV0 432 aa6.62□□□□□ -1.35
CASP4-210ENST00000531546 ADGRG3Q86Y34 549 aa6.62□□□□□ -1.35
CASP4-210ENST00000531546 PLA2G15Q8NCC3 412 aa6.62□□□□□ -1.35
CASP4-210ENST00000531546 GCC1Q96CN9 775 aa6.62□□□□□ -1.35
CASP4-210ENST00000531546 FOXRED1Q96CU9 486 aaPredicted RBP6.62□□□□□ -1.35
CASP4-210ENST00000531546 EXOC2Q96KP1 924 aa6.62□□□□□ -1.35
CASP4-210ENST00000531546 TANGO6Q9C0B7 1094 aa6.62□□□□□ -1.35
CASP4-210ENST00000531546 CCDC113Q9H0I3 377 aa6.62□□□□□ -1.35
CASP4-210ENST00000531546 POLR3BQ9NW08 1133 aaPredicted RBP6.62□□□□□ -1.35
CASP4-210ENST00000531546 TIAM2Q8IVF5 1701 aa6.62□□□□□ -1.35
CASP4-210ENST00000531546 KIAA1551Q9HCM1 1747 aa6.62□□□□□ -1.35
CASP4-210ENST00000531546 A0A0A6YYK5 440 aaPredicted RBP6.61□□□□□ -1.35
CASP4-210ENST00000531546 GLTPD2A6NH11 291 aa6.61□□□□□ -1.35
CASP4-210ENST00000531546 RECQL4O94761 1208 aa6.61□□□□□ -1.35
CASP4-210ENST00000531546 TOX4O94842 621 aa6.61□□□□□ -1.35
CASP4-210ENST00000531546 PRLP01236 227 aa6.61□□□□□ -1.35
CASP4-210ENST00000531546 GNAT2P19087 354 aa6.61□□□□□ -1.35
CASP4-210ENST00000531546 ATP2B1P20020 1258 aa6.61□□□□□ -1.35
CASP4-210ENST00000531546 IRF9Q00978 393 aa6.61□□□□□ -1.35
CASP4-210ENST00000531546 LONRF2Q1L5Z9 754 aa6.61□□□□□ -1.35
CASP4-210ENST00000531546 PLEKHG4Q58EX7 1191 aa6.61□□□□□ -1.35
CASP4-210ENST00000531546 DALRD3Q5D0E6 543 aaKnown RBP6.61□□□□□ -1.35
CASP4-210ENST00000531546 HECTD2Q5U5R9 776 aa6.61□□□□□ -1.35
CASP4-210ENST00000531546 C1QL3Q5VWW1 255 aa6.61□□□□□ -1.35
CASP4-210ENST00000531546 CC2D1AQ6P1N0 951 aaPredicted RBP6.61□□□□□ -1.35
CASP4-210ENST00000531546 OVCH1Q7RTY7 1134 aa6.61□□□□□ -1.35
CASP4-210ENST00000531546 BBC3Q96PG8 261 aaPredicted RBP6.61□□□□□ -1.35
CASP4-210ENST00000531546 CDK19Q9BWU1 502 aa6.61□□□□□ -1.35
CASP4-210ENST00000531546 PFDN2Q9UHV9 154 aa6.61□□□□□ -1.35
CASP4-210ENST00000531546 MAGEL2Q9UJ55 1249 aa6.61□□□□□ -1.35
CASP4-210ENST00000531546 ABT1Q9ULW3 272 aaKnown RBP6.61□□□□□ -1.35
CASP4-210ENST00000531546 MRPS23Q9Y3D9 190 aaKnown RBP6.61□□□□□ -1.35
CASP4-210ENST00000531546 HS3ST4Q9Y661 456 aa6.61□□□□□ -1.35
CASP4-210ENST00000531546 BRCA1P38398 1863 aaKnown RBP6.61□□□□□ -1.35
CASP4-210ENST00000531546 TAF1LQ8IZX4 1826 aa6.61□□□□□ -1.35
CASP4-210ENST00000531546 KIF13BQ9NQT8 1826 aa6.61□□□□□ -1.35
CASP4-210ENST00000531546 SLIT3O75094 1523 aa6.6□□□□□ -1.35
CASP4-210ENST00000531546 CCDC88AQ3V6T2 1871 aa6.6□□□□□ -1.35
CASP4-210ENST00000531546 ANKRD36BQ8N2N9 1353 aa6.6□□□□□ -1.35
CASP4-210ENST00000531546 C4BP0C0L5 1744 aa6.6□□□□□ -1.35
CASP4-210ENST00000531546 GRXCR1A8MXD5 290 aa6.6□□□□□ -1.35
CASP4-210ENST00000531546 NPTXRO95502 500 aa6.6□□□□□ -1.35
CASP4-210ENST00000531546 SLC6A3Q01959 620 aa6.6□□□□□ -1.35
CASP4-210ENST00000531546 TAP1Q03518 808 aa6.6□□□□□ -1.35
CASP4-210ENST00000531546 TIGD2Q4W5G0 525 aa6.6□□□□□ -1.35
CASP4-210ENST00000531546 CLEC14AQ86T13 490 aa6.6□□□□□ -1.35
CASP4-210ENST00000531546 ST8SIA2Q92186 375 aa6.6□□□□□ -1.35
CASP4-210ENST00000531546 WDR92Q96MX6 357 aa6.6□□□□□ -1.35
CASP4-210ENST00000531546 SLC52A2Q9HAB3 445 aa6.6□□□□□ -1.35
CASP4-210ENST00000531546 KCMF1Q9P0J7 381 aa6.6□□□□□ -1.35
CASP4-210ENST00000531546 NDOR1Q9UHB4 597 aa6.6□□□□□ -1.35
CASP4-210ENST00000531546 QRICH2Q9H0J4 1663 aa6.6□□□□□ -1.35
CASP4-210ENST00000531546 UBR3Q6ZT12 1888 aa6.6□□□□□ -1.35
CASP4-210ENST00000531546 NSD3Q9BZ95 1437 aa6.59□□□□□ -1.35
CASP4-210ENST00000531546 TRIM24O15164 1050 aa6.59□□□□□ -1.35
CASP4-210ENST00000531546 DAPK3O43293 454 aa6.59□□□□□ -1.35
CASP4-210ENST00000531546 RASGRP1O95267 797 aa6.59□□□□□ -1.35
CASP4-210ENST00000531546 GYPEP15421 78 aa6.59□□□□□ -1.35
CASP4-210ENST00000531546 NR4A1P22736 598 aa6.59□□□□□ -1.35
CASP4-210ENST00000531546 RGS3P49796 1198 aa6.59□□□□□ -1.35
CASP4-210ENST00000531546 NPEPPSP55786 919 aa6.59□□□□□ -1.35
CASP4-210ENST00000531546 SPIDRQ14159 915 aa6.59□□□□□ -1.35
CASP4-210ENST00000531546 DEFB115Q30KQ5 88 aa6.59□□□□□ -1.35
CASP4-210ENST00000531546 ZC3H12BQ5HYM0 836 aaKnown RBP6.59□□□□□ -1.35
CASP4-210ENST00000531546 APBB1IPQ7Z5R6 666 aaPredicted RBP6.59□□□□□ -1.35
CASP4-210ENST00000531546 C2orf69Q8N8R5 385 aa6.59□□□□□ -1.35
CASP4-210ENST00000531546 NTN5Q8WTR8 489 aaPredicted RBP6.59□□□□□ -1.35
CASP4-210ENST00000531546 DYDC2Q96IM9 177 aa6.59□□□□□ -1.35
CASP4-210ENST00000531546 FAM193BQ96PV7 902 aaPredicted RBP6.59□□□□□ -1.35
CASP4-210ENST00000531546 BOCQ9BWV1 1114 aa6.59□□□□□ -1.35
CASP4-210ENST00000531546 CYP4F11Q9HBI6 524 aa6.59□□□□□ -1.35
CASP4-210ENST00000531546 SIRPGQ9P1W8 387 aa6.59□□□□□ -1.35
CASP4-210ENST00000531546 SORCS3Q9UPU3 1222 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms