RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 CCDC142Q17RM4 750 aa5.58□□□□□ -1.52
USP47-211ENST00000531513 FAM214AQ32MH5 1076 aa5.58□□□□□ -1.52
USP47-211ENST00000531513 DCAF17Q5H9S7 520 aaPredicted RBP5.58□□□□□ -1.52
USP47-211ENST00000531513 IL31Q6EBC2 164 aa5.58□□□□□ -1.52
USP47-211ENST00000531513 FRMD7Q6ZUT3 714 aa5.58□□□□□ -1.52
USP47-211ENST00000531513 PRIMA1Q86XR5 153 aa5.58□□□□□ -1.52
USP47-211ENST00000531513 CPT1CQ8TCG5 803 aa5.58□□□□□ -1.52
USP47-211ENST00000531513 ST8SIA2Q92186 375 aa5.58□□□□□ -1.52
USP47-211ENST00000531513 RPGRQ92834 1020 aaKnown RBP5.58□□□□□ -1.52
USP47-211ENST00000531513 RUNDC1Q96C34 613 aa5.58□□□□□ -1.52
USP47-211ENST00000531513 PITHD1Q9GZP4 211 aaPredicted RBP5.58□□□□□ -1.52
USP47-211ENST00000531513 ZMAT4Q9H898 229 aa5.58□□□□□ -1.52
USP47-211ENST00000531513 MAN1C1Q9NR34 630 aa5.58□□□□□ -1.52
USP47-211ENST00000531513 PACSIN3Q9UKS6 424 aa5.58□□□□□ -1.52
USP47-211ENST00000531513 SORCS3Q9UPU3 1222 aa5.58□□□□□ -1.52
USP47-211ENST00000531513 FRMPD2Q68DX3 1309 aaPredicted RBP5.57□□□□□ -1.52
USP47-211ENST00000531513 DAPK3O43293 454 aa5.57□□□□□ -1.52
USP47-211ENST00000531513 ZRANB2O95218 330 aaKnown RBP eCLIP5.57□□□□□ -1.52
USP47-211ENST00000531513 HK1P19367 917 aa5.57□□□□□ -1.52
USP47-211ENST00000531513 LMO1P25800 156 aa5.57□□□□□ -1.52
USP47-211ENST00000531513 KIR2DL3P43628 341 aa5.57□□□□□ -1.52
USP47-211ENST00000531513 NEK3P51956 506 aa5.57□□□□□ -1.52
USP47-211ENST00000531513 DHX8Q14562 1220 aaKnown RBP5.57□□□□□ -1.52
USP47-211ENST00000531513 ACAP2Q15057 778 aa5.57□□□□□ -1.52
USP47-211ENST00000531513 PDCD1Q15116 288 aa5.57□□□□□ -1.52
USP47-211ENST00000531513 C4orf46Q504U0 113 aa5.57□□□□□ -1.52
USP47-211ENST00000531513 COBLL1Q53SF7 1204 aa5.57□□□□□ -1.52
USP47-211ENST00000531513 RRP12Q5JTH9 1297 aaKnown RBP5.57□□□□□ -1.52
USP47-211ENST00000531513 APBB1IPQ7Z5R6 666 aaPredicted RBP5.57□□□□□ -1.52
USP47-211ENST00000531513 CXorf67Q86X51 503 aaPredicted RBP5.57□□□□□ -1.52
USP47-211ENST00000531513 FAM9AQ8IZU1 332 aaPredicted RBP5.57□□□□□ -1.52
USP47-211ENST00000531513 SLC35G2Q8TBE7 412 aa5.57□□□□□ -1.52
USP47-211ENST00000531513 TTC17Q96AE7 1141 aa5.57□□□□□ -1.52
USP47-211ENST00000531513 TEKT5Q96M29 485 aa5.57□□□□□ -1.52
USP47-211ENST00000531513 ORAI2Q96SN7 254 aa5.57□□□□□ -1.52
USP47-211ENST00000531513 MS4A5Q9H3V2 200 aa5.57□□□□□ -1.52
USP47-211ENST00000531513 DDX20Q9UHI6 824 aaKnown RBP5.57□□□□□ -1.52
USP47-211ENST00000531513 SAP30BPQ9UHR5 308 aaKnown RBP5.57□□□□□ -1.52
USP47-211ENST00000531513 A0A0A6YYJ9 748 aa5.56□□□□□ -1.52
USP47-211ENST00000531513 APAF1O14727 1248 aa5.56□□□□□ -1.52
USP47-211ENST00000531513 MTSS1O43312 755 aa5.56□□□□□ -1.52
USP47-211ENST00000531513 CD40P25942 277 aa5.56□□□□□ -1.52
USP47-211ENST00000531513 GALEQ14376 348 aa5.56□□□□□ -1.52
USP47-211ENST00000531513 SAFBQ15424 915 aaKnown RBP eCLIP5.56□□□□□ -1.52
USP47-211ENST00000531513 ZRSR2Q15696 482 aaKnown RBP5.56□□□□□ -1.52
USP47-211ENST00000531513 C10orf62Q5T681 223 aaPredicted RBP5.56□□□□□ -1.52
USP47-211ENST00000531513 IFIT1BQ5T764 474 aaKnown RBP5.56□□□□□ -1.52
USP47-211ENST00000531513 HECTD2Q5U5R9 776 aa5.56□□□□□ -1.52
USP47-211ENST00000531513 CYB5RLQ6IPT4 315 aa5.56□□□□□ -1.52
USP47-211ENST00000531513 B3GNT9Q6UX72 402 aa5.56□□□□□ -1.52
USP47-211ENST00000531513 PHYKPLQ8IUZ5 450 aa5.56□□□□□ -1.52
USP47-211ENST00000531513 ZZZ3Q8IYH5 903 aa5.56□□□□□ -1.52
USP47-211ENST00000531513 JADE3Q92613 823 aa5.56□□□□□ -1.52
USP47-211ENST00000531513 ZNF764Q96H86 408 aaPredicted RBP5.56□□□□□ -1.52
USP47-211ENST00000531513 ACAP3Q96P50 834 aa5.56□□□□□ -1.52
USP47-211ENST00000531513 MTG2Q9H4K7 406 aa5.56□□□□□ -1.52
USP47-211ENST00000531513 NMRK2Q9NPI5 230 aa5.56□□□□□ -1.52
USP47-211ENST00000531513 DDX21Q9NR30 783 aaKnown RBP eCLIP5.56□□□□□ -1.52
USP47-211ENST00000531513 C1orf112Q9NSG2 853 aa5.56□□□□□ -1.52
USP47-211ENST00000531513 CCM2LQ9NUG4 571 aaPredicted RBP5.56□□□□□ -1.52
USP47-211ENST00000531513 ZNHIT2Q9UHR6 403 aa5.56□□□□□ -1.52
USP47-211ENST00000531513 TRIM24O15164 1050 aa5.55□□□□□ -1.52
USP47-211ENST00000531513 AP1G1O43747 822 aa5.55□□□□□ -1.52
USP47-211ENST00000531513 KDM1AO60341 852 aa5.55□□□□□ -1.52
USP47-211ENST00000531513 CTNND1O60716 968 aaKnown RBP5.55□□□□□ -1.52
USP47-211ENST00000531513 PRPF6O94906 941 aaKnown RBP5.55□□□□□ -1.52
USP47-211ENST00000531513 SCAF4O95104 1147 aaKnown RBP5.55□□□□□ -1.52
USP47-211ENST00000531513 HTR3AP46098 478 aa5.55□□□□□ -1.52
USP47-211ENST00000531513 MRPS21P82921 87 aaKnown RBP5.55□□□□□ -1.52
USP47-211ENST00000531513 ADCY2Q08462 1091 aa5.55□□□□□ -1.52
USP47-211ENST00000531513 KIAA1841Q6NSI8 718 aa5.55□□□□□ -1.52
USP47-211ENST00000531513 TMED8Q6PL24 325 aaPredicted RBP5.55□□□□□ -1.52
USP47-211ENST00000531513 UNQ6494/PRO21346Q6UXR6 183 aa5.55□□□□□ -1.52
USP47-211ENST00000531513 SPICE1Q8N0Z3 855 aa5.55□□□□□ -1.52
USP47-211ENST00000531513 C7orf31Q8N865 590 aa5.55□□□□□ -1.52
USP47-211ENST00000531513 BEND2Q8NDZ0 799 aa5.55□□□□□ -1.52
USP47-211ENST00000531513 TGFBRAP1Q8WUH2 860 aa5.55□□□□□ -1.52
USP47-211ENST00000531513 SSH1Q8WYL5 1049 aa5.55□□□□□ -1.52
USP47-211ENST00000531513 RTF1Q92541 710 aaKnown RBP5.55□□□□□ -1.52
USP47-211ENST00000531513 EVI5LQ96CN4 794 aa5.55□□□□□ -1.52
USP47-211ENST00000531513 STRBPQ96SI9 672 aaKnown RBP5.55□□□□□ -1.52
USP47-211ENST00000531513 MYL10Q9BUA6 226 aa5.55□□□□□ -1.52
USP47-211ENST00000531513 SLC12A5Q9H2X9 1139 aa5.55□□□□□ -1.52
USP47-211ENST00000531513 ZNF768Q9H5H4 540 aaKnown RBP5.55□□□□□ -1.52
USP47-211ENST00000531513 RIOX1Q9H6W3 641 aa5.55□□□□□ -1.52
USP47-211ENST00000531513 TAGLN3Q9UI15 199 aa5.55□□□□□ -1.52
USP47-211ENST00000531513 A0A0A6YYK5 440 aaPredicted RBP5.54□□□□□ -1.52
USP47-211ENST00000531513 LCHNA4D1U4 455 aa5.54□□□□□ -1.52
USP47-211ENST00000531513 B3GALT2O43825 422 aa5.54□□□□□ -1.52
USP47-211ENST00000531513 PPFIA4O75335 1185 aa5.54□□□□□ -1.52
USP47-211ENST00000531513 OFD1O75665 1012 aa5.54□□□□□ -1.52
USP47-211ENST00000531513 PTTG1IPP53801 180 aa5.54□□□□□ -1.52
USP47-211ENST00000531513 TIGD2Q4W5G0 525 aa5.54□□□□□ -1.52
USP47-211ENST00000531513 TIGD7Q6NT04 549 aaPredicted RBP5.54□□□□□ -1.52
USP47-211ENST00000531513 CHST15Q7LFX5 561 aaPredicted RBP5.54□□□□□ -1.52
USP47-211ENST00000531513 C11orf96Q7Z7L8 435 aa5.54□□□□□ -1.52
USP47-211ENST00000531513 NTN5Q8WTR8 489 aaPredicted RBP5.54□□□□□ -1.52
USP47-211ENST00000531513 ZNF496Q96IT1 587 aaPredicted RBP5.54□□□□□ -1.52
USP47-211ENST00000531513 TAAR9Q96RI9 348 aa5.54□□□□□ -1.52
USP47-211ENST00000531513 SOX7Q9BT81 388 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms