RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 RHOBTB2Q9BYZ6 727 aa19.7■□□□□ 0.74
PTPN11-204ENST00000531326 CCSER1Q9C0I3 900 aa19.7■□□□□ 0.74
PTPN11-204ENST00000531326 WDR6Q9NNW5 1121 aaKnown RBP19.7■□□□□ 0.74
PTPN11-204ENST00000531326 GPRC5CQ9NQ84 441 aa19.7■□□□□ 0.74
PTPN11-204ENST00000531326 DDX19AQ9NUU7 478 aaKnown RBP19.7■□□□□ 0.74
PTPN11-204ENST00000531326 PCDHA7Q9UN72 937 aa19.7■□□□□ 0.74
PTPN11-204ENST00000531326 KIAA1024Q9UPX6 916 aa19.7■□□□□ 0.74
PTPN11-204ENST00000531326 DOCK8Q8NF50 2099 aa19.7■□□□□ 0.74
PTPN11-204ENST00000531326 TCHHQ07283 1943 aa19.69■□□□□ 0.74
PTPN11-204ENST00000531326 A0A1B0GUA9 196 aa19.69■□□□□ 0.74
PTPN11-204ENST00000531326 PI15O43692 258 aa19.69■□□□□ 0.74
PTPN11-204ENST00000531326 USO1O60763 962 aaKnown RBP19.69■□□□□ 0.74
PTPN11-204ENST00000531326 CUTAO60888 179 aa19.69■□□□□ 0.74
PTPN11-204ENST00000531326 PAPLNO95428 1278 aa19.69■□□□□ 0.74
PTPN11-204ENST00000531326 SPATA31D3P0C874 917 aa19.69■□□□□ 0.74
PTPN11-204ENST00000531326 UBA7P41226 1012 aa19.69■□□□□ 0.74
PTPN11-204ENST00000531326 FUT10Q6P4F1 479 aa19.69■□□□□ 0.74
PTPN11-204ENST00000531326 SPATA31D4Q6ZUB0 917 aa19.69■□□□□ 0.74
PTPN11-204ENST00000531326 FLCNQ8NFG4 579 aa19.69■□□□□ 0.74
PTPN11-204ENST00000531326 LRRC15Q8TF66 581 aa19.69■□□□□ 0.74
PTPN11-204ENST00000531326 ZNF707Q96C28 371 aaPredicted RBP19.69■□□□□ 0.74
PTPN11-204ENST00000531326 SPATA32Q96LK8 384 aa19.69■□□□□ 0.74
PTPN11-204ENST00000531326 COLEC11Q9BWP8 271 aa19.69■□□□□ 0.74
PTPN11-204ENST00000531326 SCAND2PQ9GZW5 306 aaPredicted RBP19.69■□□□□ 0.74
PTPN11-204ENST00000531326 KLK14Q9P0G3 267 aa19.69■□□□□ 0.74
PTPN11-204ENST00000531326 CACNG4Q9UBN1 327 aa19.69■□□□□ 0.74
PTPN11-204ENST00000531326 TTLL13PA6NNM8 815 aa19.68■□□□□ 0.74
PTPN11-204ENST00000531326 NARSO43776 548 aaKnown RBP19.68■□□□□ 0.74
PTPN11-204ENST00000531326 ME1P48163 572 aa19.68■□□□□ 0.74
PTPN11-204ENST00000531326 KARSQ15046 597 aaKnown RBP19.68■□□□□ 0.74
PTPN11-204ENST00000531326 ZRSR1Q15695 479 aaKnown RBP19.68■□□□□ 0.74
PTPN11-204ENST00000531326 SHC4Q6S5L8 630 aa19.68■□□□□ 0.74
PTPN11-204ENST00000531326 CYP26C1Q6V0L0 522 aa19.68■□□□□ 0.74
PTPN11-204ENST00000531326 MAEAQ7L5Y9 396 aa19.68■□□□□ 0.74
PTPN11-204ENST00000531326 ASCL5Q7RTU5 278 aa19.68■□□□□ 0.74
PTPN11-204ENST00000531326 PALB2Q86YC2 1186 aa19.68■□□□□ 0.74
PTPN11-204ENST00000531326 HACE1Q8IYU2 909 aa19.68■□□□□ 0.74
PTPN11-204ENST00000531326 RSAD2Q8WXG1 361 aa19.68■□□□□ 0.74
PTPN11-204ENST00000531326 CCDC43Q96MW1 224 aaKnown RBP19.68■□□□□ 0.74
PTPN11-204ENST00000531326 MYADMQ96S97 322 aa19.68■□□□□ 0.74
PTPN11-204ENST00000531326 PLIN2Q99541 437 aa19.68■□□□□ 0.74
PTPN11-204ENST00000531326 GDPD2Q9HCC8 539 aa19.68■□□□□ 0.74
PTPN11-204ENST00000531326 IGSF9Q9P2J2 1179 aa19.68■□□□□ 0.74
PTPN11-204ENST00000531326 ADAM28Q9UKQ2 775 aa19.68■□□□□ 0.74
PTPN11-204ENST00000531326 CLUHO75153 1309 aa19.68■□□□□ 0.74
PTPN11-204ENST00000531326 LRRIQ4A6NIV6 560 aa19.67■□□□□ 0.74
PTPN11-204ENST00000531326 E9PMD0 336 aa19.67■□□□□ 0.74
PTPN11-204ENST00000531326 TGM5O43548 720 aa19.67■□□□□ 0.74
PTPN11-204ENST00000531326 NR1I2O75469 434 aa19.67■□□□□ 0.74
PTPN11-204ENST00000531326 AOC1P19801 751 aa19.67■□□□□ 0.74
PTPN11-204ENST00000531326 NBL1P41271 181 aa19.67■□□□□ 0.74
PTPN11-204ENST00000531326 GRIK3Q13003 919 aa19.67■□□□□ 0.74
PTPN11-204ENST00000531326 USP41Q3LFD5 358 aa19.67■□□□□ 0.74
PTPN11-204ENST00000531326 LILRA6Q6PI73 481 aa19.67■□□□□ 0.74
PTPN11-204ENST00000531326 PPP4R3CPQ6ZMV5 832 aa19.67■□□□□ 0.74
PTPN11-204ENST00000531326 GLYCTKQ8IVS8 523 aa19.67■□□□□ 0.74
PTPN11-204ENST00000531326 SMG7Q92540 1137 aaKnown RBP19.67■□□□□ 0.74
PTPN11-204ENST00000531326 PAAF1Q9BRP4 392 aa19.67■□□□□ 0.74
PTPN11-204ENST00000531326 NT5C3AQ9H0P0 336 aa19.67■□□□□ 0.74
PTPN11-204ENST00000531326 FNIP2Q9P278 1114 aa19.67■□□□□ 0.74
PTPN11-204ENST00000531326 PARP2Q9UGN5 583 aa19.67■□□□□ 0.74
PTPN11-204ENST00000531326 DPP7Q9UHL4 492 aa19.67■□□□□ 0.74
PTPN11-204ENST00000531326 DNM3Q9UQ16 869 aa19.67■□□□□ 0.74
PTPN11-204ENST00000531326 ZMYM2Q9UBW7 1377 aa19.67■□□□□ 0.74
PTPN11-204ENST00000531326 RPL17P18621 184 aaKnown RBP19.66■□□□□ 0.74
PTPN11-204ENST00000531326 PLCG1P19174 1290 aa19.66■□□□□ 0.74
PTPN11-204ENST00000531326 GBP2P32456 591 aaPredicted RBP19.66■□□□□ 0.74
PTPN11-204ENST00000531326 CDCA2Q69YH5 1023 aaPredicted RBP19.66■□□□□ 0.74
PTPN11-204ENST00000531326 GPR65Q8IYL9 337 aa19.66■□□□□ 0.74
PTPN11-204ENST00000531326 SIX5Q8N196 739 aa19.66■□□□□ 0.74
PTPN11-204ENST00000531326 KCTD17Q8N5Z5 321 aa19.66■□□□□ 0.74
PTPN11-204ENST00000531326 HDAC7Q8WUI4 952 aa19.66■□□□□ 0.74
PTPN11-204ENST00000531326 RIN2Q8WYP3 895 aaPredicted RBP19.66■□□□□ 0.74
PTPN11-204ENST00000531326 CALML4Q96GE6 196 aa19.66■□□□□ 0.74
PTPN11-204ENST00000531326 CDK5RAP3Q96JB5 506 aa19.66■□□□□ 0.74
PTPN11-204ENST00000531326 FZD8Q9H461 694 aa19.66■□□□□ 0.74
PTPN11-204ENST00000531326 PLEKHA4Q9H4M7 779 aa19.66■□□□□ 0.74
PTPN11-204ENST00000531326 EPS15L1Q9UBC2 864 aa19.66■□□□□ 0.74
PTPN11-204ENST00000531326 DOCK6Q96HP0 2047 aa19.66■□□□□ 0.74
PTPN11-204ENST00000531326 A0A087X0B3 334 aa19.65■□□□□ 0.74
PTPN11-204ENST00000531326 C1RP00736 705 aa19.65■□□□□ 0.74
PTPN11-204ENST00000531326 FAM187BQ17R55 369 aa19.65■□□□□ 0.74
PTPN11-204ENST00000531326 RTP2Q5QGT7 225 aa19.65■□□□□ 0.74
PTPN11-204ENST00000531326 ELMSAN1Q6PJG2 1045 aa19.65■□□□□ 0.74
PTPN11-204ENST00000531326 PRSS55Q6UWB4 352 aaPredicted RBP19.65■□□□□ 0.74
PTPN11-204ENST00000531326 BSNDQ8WZ55 320 aa19.65■□□□□ 0.74
PTPN11-204ENST00000531326 STAMQ92783 540 aa19.65■□□□□ 0.74
PTPN11-204ENST00000531326 PRIMPOLQ96LW4 560 aa19.65■□□□□ 0.74
PTPN11-204ENST00000531326 CXCL16Q9H2A7 254 aa19.65■□□□□ 0.74
PTPN11-204ENST00000531326 BHMT2Q9H2M3 363 aa19.65■□□□□ 0.74
PTPN11-204ENST00000531326 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.65■□□□□ 0.74
PTPN11-204ENST00000531326 BLOC1S4Q9NUP1 217 aa19.65■□□□□ 0.74
PTPN11-204ENST00000531326 PRMT7Q9NVM4 692 aaPredicted RBP19.65■□□□□ 0.74
PTPN11-204ENST00000531326 FBXL21Q9UKT6 434 aa19.65■□□□□ 0.74
PTPN11-204ENST00000531326 KRBA1A5PL33 1030 aa19.64■□□□□ 0.73
PTPN11-204ENST00000531326 ARHGEF35A5YM69 484 aa19.64■□□□□ 0.73
PTPN11-204ENST00000531326 PRR23AA6NEV1 266 aa19.64■□□□□ 0.73
PTPN11-204ENST00000531326 PTGESO14684 152 aa19.64■□□□□ 0.73
PTPN11-204ENST00000531326 TXLNAP40222 546 aa19.64■□□□□ 0.73
PTPN11-204ENST00000531326 HSP90AA2PQ14568 343 aaPredicted RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms