RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 GCFC2P16383 781 aaKnown RBP10.21□□□□□ -0.77
CHMP4A-205ENST00000531158 PSMA5P28066 241 aa10.21□□□□□ -0.77
CHMP4A-205ENST00000531158 AXLP30530 894 aa10.21□□□□□ -0.77
CHMP4A-205ENST00000531158 POU5F1BQ06416 359 aa10.21□□□□□ -0.77
CHMP4A-205ENST00000531158 GRIK3Q13003 919 aa10.21□□□□□ -0.77
CHMP4A-205ENST00000531158 NR5A1Q13285 461 aa10.21□□□□□ -0.77
CHMP4A-205ENST00000531158 MXD4Q14582 209 aaPredicted RBP10.21□□□□□ -0.77
CHMP4A-205ENST00000531158 PCBP1Q15365 356 aaKnown RBP eCLIP10.21□□□□□ -0.77
CHMP4A-205ENST00000531158 USP41Q3LFD5 358 aa10.21□□□□□ -0.77
CHMP4A-205ENST00000531158 PPM1JQ5JR12 505 aa10.21□□□□□ -0.77
CHMP4A-205ENST00000531158 RSPO2Q6UXX9 243 aaPredicted RBP10.21□□□□□ -0.77
CHMP4A-205ENST00000531158 TPH2Q8IWU9 490 aa10.21□□□□□ -0.77
CHMP4A-205ENST00000531158 GPR65Q8IYL9 337 aa10.21□□□□□ -0.77
CHMP4A-205ENST00000531158 FAM177A1Q8N128 213 aaPredicted RBP10.21□□□□□ -0.77
CHMP4A-205ENST00000531158 GPR161Q8N6U8 529 aaKnown RBP10.21□□□□□ -0.77
CHMP4A-205ENST00000531158 LNX1Q8TBB1 728 aaPredicted RBP10.21□□□□□ -0.77
CHMP4A-205ENST00000531158 SNX21Q969T3 373 aa10.21□□□□□ -0.77
CHMP4A-205ENST00000531158 COLEC11Q9BWP8 271 aa10.21□□□□□ -0.77
CHMP4A-205ENST00000531158 NFKBIZQ9BYH8 718 aa10.21□□□□□ -0.77
CHMP4A-205ENST00000531158 ZSWIM4Q9H7M6 989 aa10.21□□□□□ -0.77
CHMP4A-205ENST00000531158 PIDD1Q9HB75 910 aa10.21□□□□□ -0.77
CHMP4A-205ENST00000531158 GPRC5CQ9NQ84 441 aa10.21□□□□□ -0.77
CHMP4A-205ENST00000531158 HCFC1R1Q9NWW0 138 aa10.21□□□□□ -0.77
CHMP4A-205ENST00000531158 USP20Q9Y2K6 914 aa10.21□□□□□ -0.77
CHMP4A-205ENST00000531158 GIT1Q9Y2X7 761 aa10.21□□□□□ -0.77
CHMP4A-205ENST00000531158 CCDC194A0A1B0GVG4 234 aa10.2□□□□□ -0.78
CHMP4A-205ENST00000531158 CNOT1A5YKK6 2376 aaKnown RBP10.2□□□□□ -0.78
CHMP4A-205ENST00000531158 CASTOR2A6NHX0 329 aa10.2□□□□□ -0.78
CHMP4A-205ENST00000531158 SOBPA7XYQ1 873 aa10.2□□□□□ -0.78
CHMP4A-205ENST00000531158 NRG2O14511 850 aaPredicted RBP10.2□□□□□ -0.78
CHMP4A-205ENST00000531158 CPLX1O14810 134 aa10.2□□□□□ -0.78
CHMP4A-205ENST00000531158 DKC1O60832 514 aaKnown RBP eCLIP10.2□□□□□ -0.78
CHMP4A-205ENST00000531158 FDPSP14324 419 aaKnown RBP10.2□□□□□ -0.78
CHMP4A-205ENST00000531158 CD72P21854 359 aa10.2□□□□□ -0.78
CHMP4A-205ENST00000531158 FSHRP23945 695 aa10.2□□□□□ -0.78
CHMP4A-205ENST00000531158 RARRES1P49788 294 aa10.2□□□□□ -0.78
CHMP4A-205ENST00000531158 LMNB2Q03252 620 aa10.2□□□□□ -0.78
CHMP4A-205ENST00000531158 EML5Q05BV3 1969 aa10.2□□□□□ -0.78
CHMP4A-205ENST00000531158 SNW1Q13573 536 aaKnown RBP10.2□□□□□ -0.78
CHMP4A-205ENST00000531158 HSP90AA2PQ14568 343 aaPredicted RBP10.2□□□□□ -0.78
CHMP4A-205ENST00000531158 SLC27A1Q6PCB7 646 aa10.2□□□□□ -0.78
CHMP4A-205ENST00000531158 CD300LGQ6UXG3 332 aa10.2□□□□□ -0.78
CHMP4A-205ENST00000531158 OTUD6AQ7L8S5 288 aa10.2□□□□□ -0.78
CHMP4A-205ENST00000531158 EXOC8Q8IYI6 725 aa10.2□□□□□ -0.78
CHMP4A-205ENST00000531158 PIK3R5Q8WYR1 880 aa10.2□□□□□ -0.78
CHMP4A-205ENST00000531158 BSNDQ8WZ55 320 aa10.2□□□□□ -0.78
CHMP4A-205ENST00000531158 FGF13Q92913 245 aa10.2□□□□□ -0.78
CHMP4A-205ENST00000531158 EIF2AK1Q9BQI3 630 aaKnown RBP10.2□□□□□ -0.78
CHMP4A-205ENST00000531158 POLR3FQ9H1D9 316 aaPredicted RBP10.2□□□□□ -0.78
CHMP4A-205ENST00000531158 STK36Q9NRP7 1315 aa10.2□□□□□ -0.78
CHMP4A-205ENST00000531158 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.2□□□□□ -0.78
CHMP4A-205ENST00000531158 ZMYM2Q9UBW7 1377 aa10.2□□□□□ -0.78
CHMP4A-205ENST00000531158 DPP7Q9UHL4 492 aa10.2□□□□□ -0.78
CHMP4A-205ENST00000531158 CDH7Q9ULB5 785 aa10.2□□□□□ -0.78
CHMP4A-205ENST00000531158 ASPMQ8IZT6 3477 aa10.2□□□□□ -0.78
CHMP4A-205ENST00000531158 SPAG17Q6Q759 2223 aa10.19□□□□□ -0.78
CHMP4A-205ENST00000531158 TSC2P49815 1807 aa10.19□□□□□ -0.78
CHMP4A-205ENST00000531158 SF3B1O75533 1304 aaKnown RBP eCLIP10.19□□□□□ -0.78
CHMP4A-205ENST00000531158 KANSL1LA0AUZ9 987 aa10.19□□□□□ -0.78
CHMP4A-205ENST00000531158 CCL16O15467 120 aa10.19□□□□□ -0.78
CHMP4A-205ENST00000531158 DGAT1O75907 488 aa10.19□□□□□ -0.78
CHMP4A-205ENST00000531158 C8AP07357 584 aa10.19□□□□□ -0.78
CHMP4A-205ENST00000531158 TUSC3Q13454 348 aa10.19□□□□□ -0.78
CHMP4A-205ENST00000531158 FZD5Q13467 585 aa10.19□□□□□ -0.78
CHMP4A-205ENST00000531158 TFDP1Q14186 410 aa10.19□□□□□ -0.78
CHMP4A-205ENST00000531158 GSE1Q14687 1217 aa10.19□□□□□ -0.78
CHMP4A-205ENST00000531158 PSMD5Q16401 504 aa10.19□□□□□ -0.78
CHMP4A-205ENST00000531158 SLC5A9Q2M3M2 681 aa10.19□□□□□ -0.78
CHMP4A-205ENST00000531158 VARS2Q5ST30 1063 aaKnown RBP10.19□□□□□ -0.78
CHMP4A-205ENST00000531158 CDCA2Q69YH5 1023 aaPredicted RBP10.19□□□□□ -0.78
CHMP4A-205ENST00000531158 HSCBQ8IWL3 235 aa10.19□□□□□ -0.78
CHMP4A-205ENST00000531158 NPAS3Q8IXF0 933 aa10.19□□□□□ -0.78
CHMP4A-205ENST00000531158 PIGOQ8TEQ8 1089 aa10.19□□□□□ -0.78
CHMP4A-205ENST00000531158 NELL1Q92832 810 aa10.19□□□□□ -0.78
CHMP4A-205ENST00000531158 KXD1Q9BQD3 176 aa10.19□□□□□ -0.78
CHMP4A-205ENST00000531158 TRIM6Q9C030 488 aaPredicted RBP10.19□□□□□ -0.78
CHMP4A-205ENST00000531158 PDZD7Q9H5P4 517 aa10.19□□□□□ -0.78
CHMP4A-205ENST00000531158 ANGPTL2Q9UKU9 493 aa10.19□□□□□ -0.78
CHMP4A-205ENST00000531158 TPCN1Q9ULQ1 816 aa10.19□□□□□ -0.78
CHMP4A-205ENST00000531158 CYP46A1Q9Y6A2 500 aa10.19□□□□□ -0.78
CHMP4A-205ENST00000531158 DENND4CQ5VZ89 1909 aa10.19□□□□□ -0.78
CHMP4A-205ENST00000531158 NUP210Q8TEM1 1887 aaPredicted RBP10.19□□□□□ -0.78
CHMP4A-205ENST00000531158 CEP295Q9C0D2 2601 aa10.18□□□□□ -0.78
CHMP4A-205ENST00000531158 USO1O60763 962 aaKnown RBP10.18□□□□□ -0.78
CHMP4A-205ENST00000531158 KINO60870 393 aaKnown RBP10.18□□□□□ -0.78
CHMP4A-205ENST00000531158 NR1I2O75469 434 aa10.18□□□□□ -0.78
CHMP4A-205ENST00000531158 TADA2AO75478 443 aa10.18□□□□□ -0.78
CHMP4A-205ENST00000531158 HNRNPA1P09651 372 aaKnown RBP eCLIP10.18□□□□□ -0.78
CHMP4A-205ENST00000531158 SPATA31C1P0DKV0 1188 aa10.18□□□□□ -0.78
CHMP4A-205ENST00000531158 RFX1P22670 979 aa10.18□□□□□ -0.78
CHMP4A-205ENST00000531158 MLF2Q15773 248 aaPredicted RBP10.18□□□□□ -0.78
CHMP4A-205ENST00000531158 FAM171A1Q5VUB5 890 aa10.18□□□□□ -0.78
CHMP4A-205ENST00000531158 EEF1DP3Q658K8 133 aa10.18□□□□□ -0.78
CHMP4A-205ENST00000531158 ELMSAN1Q6PJG2 1045 aa10.18□□□□□ -0.78
CHMP4A-205ENST00000531158 PPP4R3CPQ6ZMV5 832 aa10.18□□□□□ -0.78
CHMP4A-205ENST00000531158 ZNF687Q8N1G0 1237 aa10.18□□□□□ -0.78
CHMP4A-205ENST00000531158 C3orf58Q8NDZ4 430 aa10.18□□□□□ -0.78
CHMP4A-205ENST00000531158 SLC7A14Q8TBB6 771 aa10.18□□□□□ -0.78
CHMP4A-205ENST00000531158 ING5Q8WYH8 240 aa10.18□□□□□ -0.78
CHMP4A-205ENST00000531158 TTPALQ9BTX7 342 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms