RNA–Protein interactions for RNA: ENST00000531131.1

NXF1-208, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2 BASIC

Gene NXF1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-208ENST00000531131 CD302Q8IX05 232 aa12.45□□□□□ -0.42
NXF1-208ENST00000531131 SYCP3Q8IZU3 236 aa12.45□□□□□ -0.42
NXF1-208ENST00000531131 FMR1NBQ8N0W7 255 aaPredicted RBP12.45□□□□□ -0.42
NXF1-208ENST00000531131 CEP120Q8N960 986 aa12.45□□□□□ -0.42
NXF1-208ENST00000531131 TMEM87AQ8NBN3 555 aa12.45□□□□□ -0.42
NXF1-208ENST00000531131 ZNF507Q8TCN5 953 aa12.45□□□□□ -0.42
NXF1-208ENST00000531131 SNX27Q96L92 541 aa12.45□□□□□ -0.42
NXF1-208ENST00000531131 UROC1Q96N76 676 aa12.45□□□□□ -0.42
NXF1-208ENST00000531131 MSTO1Q9BUK6 570 aa12.45□□□□□ -0.42
NXF1-208ENST00000531131 NGRNQ9NPE2 291 aaKnown RBP12.45□□□□□ -0.42
NXF1-208ENST00000531131 CNTN3Q9P232 1028 aa12.45□□□□□ -0.42
NXF1-208ENST00000531131 SMIM28A0A1B0GU29 152 aa12.44□□□□□ -0.42
NXF1-208ENST00000531131 NT5C1B-RDH14C9J2C7 533 aa12.44□□□□□ -0.42
NXF1-208ENST00000531131 ANKRD63C9JTQ0 380 aa12.44□□□□□ -0.42
NXF1-208ENST00000531131 FSCN2O14926 492 aa12.44□□□□□ -0.42
NXF1-208ENST00000531131 FAM189A1O60320 539 aa12.44□□□□□ -0.42
NXF1-208ENST00000531131 B4GALT3O60512 393 aa12.44□□□□□ -0.42
NXF1-208ENST00000531131 LDHAP00338 332 aaKnown RBP12.44□□□□□ -0.42
NXF1-208ENST00000531131 ADRB2P07550 413 aa12.44□□□□□ -0.42
NXF1-208ENST00000531131 HARSP12081 509 aaKnown RBP12.44□□□□□ -0.42
NXF1-208ENST00000531131 GARTP22102 1010 aa12.44□□□□□ -0.42
NXF1-208ENST00000531131 OR1G1P47890 313 aa12.44□□□□□ -0.42
NXF1-208ENST00000531131 KCNA1Q09470 495 aa12.44□□□□□ -0.42
NXF1-208ENST00000531131 HSP90AA2PQ14568 343 aaPredicted RBP12.44□□□□□ -0.42
NXF1-208ENST00000531131 NAB2Q15742 525 aa12.44□□□□□ -0.42
NXF1-208ENST00000531131 CCDC85BQ15834 202 aaPredicted RBP12.44□□□□□ -0.42
NXF1-208ENST00000531131 SLC10A6Q3KNW5 377 aa12.44□□□□□ -0.42
NXF1-208ENST00000531131 EPM2AIP1Q7L775 607 aaPredicted RBP12.44□□□□□ -0.42
NXF1-208ENST00000531131 ELOA2Q8IYF1 753 aaPredicted RBP12.44□□□□□ -0.42
NXF1-208ENST00000531131 GRAMD1CQ8IYS0 662 aa12.44□□□□□ -0.42
NXF1-208ENST00000531131 MICALL1Q8N3F8 863 aa12.44□□□□□ -0.42
NXF1-208ENST00000531131 ENGASEQ8NFI3 743 aa12.44□□□□□ -0.42
NXF1-208ENST00000531131 MICAL1Q8TDZ2 1067 aa12.44□□□□□ -0.42
NXF1-208ENST00000531131 POMGNT1Q8WZA1 660 aa12.44□□□□□ -0.42
NXF1-208ENST00000531131 DDX27Q96GQ7 796 aaKnown RBP12.44□□□□□ -0.42
NXF1-208ENST00000531131 TIGD1Q96MW7 591 aa12.44□□□□□ -0.42
NXF1-208ENST00000531131 PPP1R10Q96QC0 940 aaKnown RBP12.44□□□□□ -0.42
NXF1-208ENST00000531131 COL25A1Q9BXS0 654 aaPredicted RBP12.44□□□□□ -0.42
NXF1-208ENST00000531131 HAPLN2Q9GZV7 340 aa12.44□□□□□ -0.42
NXF1-208ENST00000531131 RPF1Q9H9Y2 349 aaKnown RBP12.44□□□□□ -0.42
NXF1-208ENST00000531131 EXOC1Q9NV70 894 aa12.44□□□□□ -0.42
NXF1-208ENST00000531131 CGNQ9P2M7 1197 aaKnown RBP12.44□□□□□ -0.42
NXF1-208ENST00000531131 HOOK1Q9UJC3 728 aaKnown RBP12.44□□□□□ -0.42
NXF1-208ENST00000531131 AGO2Q9UKV8 859 aaKnown RBP12.44□□□□□ -0.42
NXF1-208ENST00000531131 COG5Q9UP83 839 aa12.44□□□□□ -0.42
NXF1-208ENST00000531131 SSX2IPQ9Y2D8 614 aa12.44□□□□□ -0.42
NXF1-208ENST00000531131 BDP1A6H8Y1 2624 aa12.44□□□□□ -0.42
NXF1-208ENST00000531131 ATG2AQ2TAZ0 1938 aa12.43□□□□□ -0.42
NXF1-208ENST00000531131 PDCD11Q14690 1871 aaKnown RBP12.43□□□□□ -0.42
NXF1-208ENST00000531131 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.43□□□□□ -0.42
NXF1-208ENST00000531131 TTC26A0AVF1 554 aa12.43□□□□□ -0.42
NXF1-208ENST00000531131 KLRC4O43908 158 aa12.43□□□□□ -0.42
NXF1-208ENST00000531131 PRPF6O94906 941 aaKnown RBP12.43□□□□□ -0.42
NXF1-208ENST00000531131 RPN1P04843 607 aaKnown RBP12.43□□□□□ -0.42
NXF1-208ENST00000531131 CASP1P29466 404 aa12.43□□□□□ -0.42
NXF1-208ENST00000531131 ERVFC1P60507 584 aa12.43□□□□□ -0.42
NXF1-208ENST00000531131 PPP2R3AQ06190 1150 aa12.43□□□□□ -0.42
NXF1-208ENST00000531131 DPYDQ12882 1025 aa12.43□□□□□ -0.42
NXF1-208ENST00000531131 SNW1Q13573 536 aaKnown RBP12.43□□□□□ -0.42
NXF1-208ENST00000531131 SMC1AQ14683 1233 aaKnown RBP12.43□□□□□ -0.42
NXF1-208ENST00000531131 BMT2Q1RMZ1 405 aa12.43□□□□□ -0.42
NXF1-208ENST00000531131 KMT5BQ4FZB7 885 aa12.43□□□□□ -0.42
NXF1-208ENST00000531131 TPRNQ4KMQ1 711 aa12.43□□□□□ -0.42
NXF1-208ENST00000531131 TCEAL5Q5H9L2 206 aa12.43□□□□□ -0.42
NXF1-208ENST00000531131 CLEC17AQ6ZS10 378 aa12.43□□□□□ -0.42
NXF1-208ENST00000531131 TMC7Q7Z402 723 aa12.43□□□□□ -0.42
NXF1-208ENST00000531131 GPR65Q8IYL9 337 aa12.43□□□□□ -0.42
NXF1-208ENST00000531131 VPS52Q8N1B4 723 aa12.43□□□□□ -0.42
NXF1-208ENST00000531131 PPM1EQ8WY54 764 aa12.43□□□□□ -0.42
NXF1-208ENST00000531131 CDCA3Q99618 268 aaPredicted RBP12.43□□□□□ -0.42
NXF1-208ENST00000531131 TCF25Q9BQ70 676 aa12.43□□□□□ -0.42
NXF1-208ENST00000531131 CPSF3Q9UKF6 684 aaKnown RBP12.43□□□□□ -0.42
NXF1-208ENST00000531131 IRAK3Q9Y616 596 aa12.43□□□□□ -0.42
NXF1-208ENST00000531131 TRANK1O15050 2925 aa12.43□□□□□ -0.42
NXF1-208ENST00000531131 REV3LO60673 3130 aa12.42□□□□□ -0.42
NXF1-208ENST00000531131 TMEM189-UBE2V1I3L0A0 370 aa12.42□□□□□ -0.42
NXF1-208ENST00000531131 XPOTO43592 962 aaKnown RBP12.42□□□□□ -0.42
NXF1-208ENST00000531131 RHOBTB3O94955 611 aa12.42□□□□□ -0.42
NXF1-208ENST00000531131 KIF20AO95235 890 aa12.42□□□□□ -0.42
NXF1-208ENST00000531131 EFEMP2O95967 443 aa12.42□□□□□ -0.42
NXF1-208ENST00000531131 CXCL8P10145 99 aa12.42□□□□□ -0.42
NXF1-208ENST00000531131 CTSAP10619 480 aa12.42□□□□□ -0.42
NXF1-208ENST00000531131 ADSSP30520 456 aa12.42□□□□□ -0.42
NXF1-208ENST00000531131 RPL9P32969 192 aaKnown RBP12.42□□□□□ -0.42
NXF1-208ENST00000531131 IRS1P35568 1242 aa12.42□□□□□ -0.42
NXF1-208ENST00000531131 ELAVL2Q12926 359 aaKnown RBP12.42□□□□□ -0.42
NXF1-208ENST00000531131 KCNB1Q14721 858 aa12.42□□□□□ -0.42
NXF1-208ENST00000531131 COL19A1Q14993 1142 aa12.42□□□□□ -0.42
NXF1-208ENST00000531131 SKIV2LQ15477 1246 aaKnown RBP12.42□□□□□ -0.42
NXF1-208ENST00000531131 DCLRE1AQ6PJP8 1040 aa12.42□□□□□ -0.42
NXF1-208ENST00000531131 TMEM173Q86WV6 379 aaPredicted RBP12.42□□□□□ -0.42
NXF1-208ENST00000531131 MRPL43Q8N983 215 aaKnown RBP12.42□□□□□ -0.42
NXF1-208ENST00000531131 SCFD1Q8WVM8 642 aa12.42□□□□□ -0.42
NXF1-208ENST00000531131 HLA-CQ95604 372 aa12.42□□□□□ -0.42
NXF1-208ENST00000531131 HPS3Q969F9 1004 aa12.42□□□□□ -0.42
NXF1-208ENST00000531131 FGFBP2Q9BYJ0 223 aa12.42□□□□□ -0.42
NXF1-208ENST00000531131 GTPBP4Q9BZE4 634 aaKnown RBP12.42□□□□□ -0.42
NXF1-208ENST00000531131 ASB7Q9H672 318 aa12.42□□□□□ -0.42
NXF1-208ENST00000531131 KIAA1586Q9HCI6 787 aa12.42□□□□□ -0.42
NXF1-208ENST00000531131 SLC39A2Q9NP94 309 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms