RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 PMS1P54277 932 aaKnown RBP23.22■■□□□ 1.31
CAPN1-220ENST00000530567 WNT7BP56706 349 aa23.22■■□□□ 1.31
CAPN1-220ENST00000530567 DSC1Q08554 894 aa23.22■■□□□ 1.31
CAPN1-220ENST00000530567 NAB2Q15742 525 aa23.22■■□□□ 1.31
CAPN1-220ENST00000530567 GLRA4Q5JXX5 417 aa23.22■■□□□ 1.31
CAPN1-220ENST00000530567 CENPPQ6IPU0 288 aa23.22■■□□□ 1.31
CAPN1-220ENST00000530567 SLC9A9Q8IVB4 645 aa23.22■■□□□ 1.31
CAPN1-220ENST00000530567 GPD1LQ8N335 351 aa23.22■■□□□ 1.31
CAPN1-220ENST00000530567 PPP1R10Q96QC0 940 aaKnown RBP23.22■■□□□ 1.31
CAPN1-220ENST00000530567 RPS6KC1Q96S38 1066 aa23.22■■□□□ 1.31
CAPN1-220ENST00000530567 NRDE2Q9H7Z3 1164 aa23.22■■□□□ 1.31
CAPN1-220ENST00000530567 RPF1Q9H9Y2 349 aaKnown RBP23.22■■□□□ 1.31
CAPN1-220ENST00000530567 KANSL3Q9P2N6 904 aa23.22■■□□□ 1.31
CAPN1-220ENST00000530567 NR3C1P04150 777 aa23.21■■□□□ 1.31
CAPN1-220ENST00000530567 KCNE1P15382 129 aa23.21■■□□□ 1.31
CAPN1-220ENST00000530567 CYP2J2P51589 502 aa23.21■■□□□ 1.31
CAPN1-220ENST00000530567 POU5F1Q01860 360 aaKnown RBP23.21■■□□□ 1.31
CAPN1-220ENST00000530567 GRIK3Q13003 919 aa23.21■■□□□ 1.31
CAPN1-220ENST00000530567 NFIL3Q16649 462 aa23.21■■□□□ 1.31
CAPN1-220ENST00000530567 CAVIN1Q6NZI2 390 aaKnown RBP23.21■■□□□ 1.31
CAPN1-220ENST00000530567 CBWD2Q8IUF1 395 aa23.21■■□□□ 1.31
CAPN1-220ENST00000530567 BRSK2Q8IWQ3 736 aa23.21■■□□□ 1.31
CAPN1-220ENST00000530567 C17orf80Q9BSJ5 609 aa23.21■■□□□ 1.31
CAPN1-220ENST00000530567 TTYH1Q9H313 450 aaPredicted RBP23.21■■□□□ 1.31
CAPN1-220ENST00000530567 SLC28A3Q9HAS3 691 aa23.21■■□□□ 1.31
CAPN1-220ENST00000530567 PLEKHA5Q9HAU0 1116 aa23.21■■□□□ 1.31
CAPN1-220ENST00000530567 SMIM28A0A1B0GU29 152 aa23.2■■□□□ 1.3
CAPN1-220ENST00000530567 CALUO43852 315 aaPredicted RBP23.2■■□□□ 1.3
CAPN1-220ENST00000530567 LDHAP00338 332 aaKnown RBP23.2■■□□□ 1.3
CAPN1-220ENST00000530567 FXR1P51114 621 aaKnown RBP eCLIP23.2■■□□□ 1.3
CAPN1-220ENST00000530567 ERVK-21P61565 698 aa23.2■■□□□ 1.3
CAPN1-220ENST00000530567 NFKBIBQ15653 356 aa23.2■■□□□ 1.3
CAPN1-220ENST00000530567 XXYLT1Q8NBI6 393 aa23.2■■□□□ 1.3
CAPN1-220ENST00000530567 DHTKD1Q96HY7 919 aaPredicted RBP23.2■■□□□ 1.3
CAPN1-220ENST00000530567 DNAJB4Q9UDY4 337 aa23.2■■□□□ 1.3
CAPN1-220ENST00000530567 TMEM265A0A087WTH1 108 aa23.19■■□□□ 1.3
CAPN1-220ENST00000530567 TRIM49BA6NDI0 452 aa23.19■■□□□ 1.3
CAPN1-220ENST00000530567 LACTBL1A8MY62 500 aa23.19■■□□□ 1.3
CAPN1-220ENST00000530567 PSMA7O14818 248 aa23.19■■□□□ 1.3
CAPN1-220ENST00000530567 PPP1R2P41236 205 aa23.19■■□□□ 1.3
CAPN1-220ENST00000530567 MYBPC2Q14324 1141 aa23.19■■□□□ 1.3
CAPN1-220ENST00000530567 EDRF1Q3B7T1 1238 aa23.19■■□□□ 1.3
CAPN1-220ENST00000530567 DPCR1Q3MIW9 517 aa23.19■■□□□ 1.3
CAPN1-220ENST00000530567 COLGALT2Q8IYK4 626 aa23.19■■□□□ 1.3
CAPN1-220ENST00000530567 P2RX5Q93086 422 aa23.19■■□□□ 1.3
CAPN1-220ENST00000530567 TGS1Q96RS0 853 aaKnown RBP23.19■■□□□ 1.3
CAPN1-220ENST00000530567 THP07101 528 aa23.18■■□□□ 1.3
CAPN1-220ENST00000530567 CCNE1P24864 410 aa23.18■■□□□ 1.3
CAPN1-220ENST00000530567 PBX3P40426 434 aa23.18■■□□□ 1.3
CAPN1-220ENST00000530567 RNASELQ05823 741 aaKnown RBP23.18■■□□□ 1.3
CAPN1-220ENST00000530567 PPP2R3AQ06190 1150 aa23.18■■□□□ 1.3
CAPN1-220ENST00000530567 SPAG1Q07617 926 aa23.18■■□□□ 1.3
CAPN1-220ENST00000530567 STIM1Q13586 685 aa23.18■■□□□ 1.3
CAPN1-220ENST00000530567 ANKRD40Q6AI12 368 aa23.18■■□□□ 1.3
CAPN1-220ENST00000530567 KLHL10Q6JEL2 608 aa23.18■■□□□ 1.3
CAPN1-220ENST00000530567 ZC3H3Q8IXZ2 948 aaKnown RBP23.18■■□□□ 1.3
CAPN1-220ENST00000530567 COLGALT1Q8NBJ5 622 aa23.18■■□□□ 1.3
CAPN1-220ENST00000530567 ZNF576Q9H609 170 aa23.18■■□□□ 1.3
CAPN1-220ENST00000530567 RBAKQ9NYW8 714 aaPredicted RBP23.18■■□□□ 1.3
CAPN1-220ENST00000530567 EPOPA6NHQ4 379 aa23.17■■□□□ 1.3
CAPN1-220ENST00000530567 ZC3H11AO75152 810 aaKnown RBP eCLIP23.17■■□□□ 1.3
CAPN1-220ENST00000530567 LAG3P18627 525 aa23.17■■□□□ 1.3
CAPN1-220ENST00000530567 NR2F2P24468 414 aa23.17■■□□□ 1.3
CAPN1-220ENST00000530567 BMPR1AP36894 532 aa23.17■■□□□ 1.3
CAPN1-220ENST00000530567 SLC11A1P49279 550 aa23.17■■□□□ 1.3
CAPN1-220ENST00000530567 CASP4P49662 377 aa23.17■■□□□ 1.3
CAPN1-220ENST00000530567 BCAR1P56945 870 aa23.17■■□□□ 1.3
CAPN1-220ENST00000530567 NLRP12P59046 1061 aa23.17■■□□□ 1.3
CAPN1-220ENST00000530567 SOX4Q06945 474 aaPredicted RBP23.17■■□□□ 1.3
CAPN1-220ENST00000530567 ZBTB6Q15916 424 aa23.17■■□□□ 1.3
CAPN1-220ENST00000530567 SNRNP35Q16560 246 aaKnown RBP23.17■■□□□ 1.3
CAPN1-220ENST00000530567 EPC2Q52LR7 807 aa23.17■■□□□ 1.3
CAPN1-220ENST00000530567 TTI2Q6NXR4 508 aa23.17■■□□□ 1.3
CAPN1-220ENST00000530567 NOC3LQ8WTT2 800 aaKnown RBP23.17■■□□□ 1.3
CAPN1-220ENST00000530567 NELFBQ8WX92 580 aa23.17■■□□□ 1.3
CAPN1-220ENST00000530567 CERS4Q9HA82 394 aa23.17■■□□□ 1.3
CAPN1-220ENST00000530567 KIAA1586Q9HCI6 787 aa23.17■■□□□ 1.3
CAPN1-220ENST00000530567 CACNG4Q9UBN1 327 aa23.17■■□□□ 1.3
CAPN1-220ENST00000530567 MTUS1Q9ULD2 1270 aa23.17■■□□□ 1.3
CAPN1-220ENST00000530567 CTNND2Q9UQB3 1225 aa23.17■■□□□ 1.3
CAPN1-220ENST00000530567 SZT2Q5T011 3432 aa23.17■■□□□ 1.3
CAPN1-220ENST00000530567 CDH23Q9H251 3354 aa23.17■■□□□ 1.3
CAPN1-220ENST00000530567 ZNF233A6NK53 670 aa23.16■■□□□ 1.3
CAPN1-220ENST00000530567 C5orf67F2Z3F1 127 aa23.16■■□□□ 1.3
CAPN1-220ENST00000530567 EXOC3O60645 756 aa23.16■■□□□ 1.3
CAPN1-220ENST00000530567 GALTP07902 379 aa23.16■■□□□ 1.3
CAPN1-220ENST00000530567 NFICP08651 508 aa23.16■■□□□ 1.3
CAPN1-220ENST00000530567 CTNNB1P35222 781 aa23.16■■□□□ 1.3
CAPN1-220ENST00000530567 TUSC3Q13454 348 aa23.16■■□□□ 1.3
CAPN1-220ENST00000530567 GPR153Q6NV75 609 aa23.16■■□□□ 1.3
CAPN1-220ENST00000530567 KCNT2Q6UVM3 1135 aa23.16■■□□□ 1.3
CAPN1-220ENST00000530567 TMEM173Q86WV6 379 aaPredicted RBP23.16■■□□□ 1.3
CAPN1-220ENST00000530567 CD302Q8IX05 232 aa23.16■■□□□ 1.3
CAPN1-220ENST00000530567 TMEM130Q8N3G9 435 aa23.16■■□□□ 1.3
CAPN1-220ENST00000530567 MLKLQ8NB16 471 aa23.16■■□□□ 1.3
CAPN1-220ENST00000530567 C18orf25Q96B23 403 aaPredicted RBP23.16■■□□□ 1.3
CAPN1-220ENST00000530567 FAM212AQ96EL1 285 aa23.16■■□□□ 1.3
CAPN1-220ENST00000530567 SAMD11Q96NU1 681 aa23.16■■□□□ 1.3
CAPN1-220ENST00000530567 MED15Q96RN5 788 aa23.16■■□□□ 1.3
CAPN1-220ENST00000530567 GZF1Q9H116 711 aaPredicted RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms