RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 SHDQ96IW2 340 aa16.49■□□□□ 0.23
CAPN1-219ENST00000530495 POLR3CQ9BUI4 534 aaPredicted RBP16.49■□□□□ 0.23
CAPN1-219ENST00000530495 TMEM60Q9H2L4 133 aa16.49■□□□□ 0.23
CAPN1-219ENST00000530495 R4GN57 208 aa16.49■□□□□ 0.23
CAPN1-219ENST00000530495 VWA8A3KMH1 1905 aa16.49■□□□□ 0.23
CAPN1-219ENST00000530495 ACKR2O00590 384 aa16.48■□□□□ 0.23
CAPN1-219ENST00000530495 ADAM12O43184 909 aa16.48■□□□□ 0.23
CAPN1-219ENST00000530495 MED24O75448 989 aa16.48■□□□□ 0.23
CAPN1-219ENST00000530495 C8AP07357 584 aa16.48■□□□□ 0.23
CAPN1-219ENST00000530495 SP9P0CG40 484 aa16.48■□□□□ 0.23
CAPN1-219ENST00000530495 RAB33AQ14088 237 aa16.48■□□□□ 0.23
CAPN1-219ENST00000530495 TRIM29Q14134 588 aa16.48■□□□□ 0.23
CAPN1-219ENST00000530495 MAPK6Q16659 721 aa16.48■□□□□ 0.23
CAPN1-219ENST00000530495 UVSSAQ2YD98 709 aa16.48■□□□□ 0.23
CAPN1-219ENST00000530495 NOSTRINQ8IVI9 506 aa16.48■□□□□ 0.23
CAPN1-219ENST00000530495 PJA1Q8NG27 643 aa16.48■□□□□ 0.23
CAPN1-219ENST00000530495 FGF13Q92913 245 aa16.48■□□□□ 0.23
CAPN1-219ENST00000530495 CCDC113Q9H0I3 377 aa16.48■□□□□ 0.23
CAPN1-219ENST00000530495 GVINP1Q7Z2Y8 2422 aa16.48■□□□□ 0.23
CAPN1-219ENST00000530495 NOTCH4Q99466 2003 aa16.47■□□□□ 0.23
CAPN1-219ENST00000530495 XYLBO75191 536 aa16.47■□□□□ 0.23
CAPN1-219ENST00000530495 RECQL4O94761 1208 aa16.47■□□□□ 0.23
CAPN1-219ENST00000530495 LARGE1O95461 756 aa16.47■□□□□ 0.23
CAPN1-219ENST00000530495 POU2F2P09086 479 aa16.47■□□□□ 0.23
CAPN1-219ENST00000530495 GLULP15104 373 aa16.47■□□□□ 0.23
CAPN1-219ENST00000530495 CYP11B2P19099 503 aa16.47■□□□□ 0.23
CAPN1-219ENST00000530495 FGFR3P22607 806 aa16.47■□□□□ 0.23
CAPN1-219ENST00000530495 RPA1P27694 616 aa16.47■□□□□ 0.23
CAPN1-219ENST00000530495 MCM7P33993 719 aa16.47■□□□□ 0.23
CAPN1-219ENST00000530495 NAMPTP43490 491 aa16.47■□□□□ 0.23
CAPN1-219ENST00000530495 AXDND1Q5T1B0 1012 aaPredicted RBP16.47■□□□□ 0.23
CAPN1-219ENST00000530495 ZC3H14Q6PJT7 736 aaKnown RBP16.47■□□□□ 0.23
CAPN1-219ENST00000530495 PADI6Q6TGC4 694 aa16.47■□□□□ 0.23
CAPN1-219ENST00000530495 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.47■□□□□ 0.23
CAPN1-219ENST00000530495 MTSS1LQ765P7 747 aa16.47■□□□□ 0.23
CAPN1-219ENST00000530495 RTL10Q7L3V2 364 aa16.47■□□□□ 0.23
CAPN1-219ENST00000530495 BSNDQ8WZ55 320 aa16.47■□□□□ 0.23
CAPN1-219ENST00000530495 ADPGKQ9BRR6 497 aa16.47■□□□□ 0.23
CAPN1-219ENST00000530495 DDX23Q9BUQ8 820 aaKnown RBP16.47■□□□□ 0.23
CAPN1-219ENST00000530495 FOXQ1Q9C009 403 aa16.47■□□□□ 0.23
CAPN1-219ENST00000530495 USP20Q9Y2K6 914 aa16.47■□□□□ 0.23
CAPN1-219ENST00000530495 DCHS1Q96JQ0 3298 aa16.47■□□□□ 0.23
CAPN1-219ENST00000530495 DMDP11532 3685 aa16.47■□□□□ 0.23
CAPN1-219ENST00000530495 KANSL1LA0AUZ9 987 aa16.46■□□□□ 0.23
CAPN1-219ENST00000530495 TMEM189-UBE2V1I3L0A0 370 aa16.46■□□□□ 0.23
CAPN1-219ENST00000530495 CCL16O15467 120 aa16.46■□□□□ 0.23
CAPN1-219ENST00000530495 PRKCBP05771 671 aa16.46■□□□□ 0.23
CAPN1-219ENST00000530495 OR1D2P34982 312 aa16.46■□□□□ 0.23
CAPN1-219ENST00000530495 RBM25P49756 843 aaKnown RBP16.46■□□□□ 0.23
CAPN1-219ENST00000530495 SNW1Q13573 536 aaKnown RBP16.46■□□□□ 0.23
CAPN1-219ENST00000530495 TMEM132AQ24JP5 1023 aa16.46■□□□□ 0.23
CAPN1-219ENST00000530495 DEPTORQ8TB45 409 aa16.46■□□□□ 0.23
CAPN1-219ENST00000530495 ITFG1Q8TB96 612 aa16.46■□□□□ 0.23
CAPN1-219ENST00000530495 KCNH3Q9ULD8 1083 aa16.46■□□□□ 0.23
CAPN1-219ENST00000530495 POLIQ9UNA4 740 aa16.46■□□□□ 0.23
CAPN1-219ENST00000530495 MIA3Q5JRA6 1907 aa16.46■□□□□ 0.23
CAPN1-219ENST00000530495 TRIP11Q15643 1979 aa16.46■□□□□ 0.22
CAPN1-219ENST00000530495 CACNA1IQ9P0X4 2223 aa16.45■□□□□ 0.22
CAPN1-219ENST00000530495 JAK2O60674 1132 aa16.45■□□□□ 0.22
CAPN1-219ENST00000530495 EDN1P05305 212 aa16.45■□□□□ 0.22
CAPN1-219ENST00000530495 IGFBP6P24592 240 aaPredicted RBP16.45■□□□□ 0.22
CAPN1-219ENST00000530495 EFNA5P52803 228 aa16.45■□□□□ 0.22
CAPN1-219ENST00000530495 PRKCQQ04759 706 aa16.45■□□□□ 0.22
CAPN1-219ENST00000530495 PPP2R5AQ15172 486 aa16.45■□□□□ 0.22
CAPN1-219ENST00000530495 SLC44A4Q53GD3 710 aa16.45■□□□□ 0.22
CAPN1-219ENST00000530495 EEF1DP3Q658K8 133 aa16.45■□□□□ 0.22
CAPN1-219ENST00000530495 CD300LGQ6UXG3 332 aa16.45■□□□□ 0.22
CAPN1-219ENST00000530495 MAML2Q8IZL2 1156 aaPredicted RBP16.45■□□□□ 0.22
CAPN1-219ENST00000530495 ERMNQ8TAM6 284 aa16.45■□□□□ 0.22
CAPN1-219ENST00000530495 SLC7A14Q8TBB6 771 aa16.45■□□□□ 0.22
CAPN1-219ENST00000530495 BORCS6Q96GS4 357 aa16.45■□□□□ 0.22
CAPN1-219ENST00000530495 OSBPL6Q9BZF3 934 aa16.45■□□□□ 0.22
CAPN1-219ENST00000530495 DNMT3BQ9UBC3 853 aaKnown RBP16.45■□□□□ 0.22
CAPN1-219ENST00000530495 MTRRQ9UBK8 725 aa16.45■□□□□ 0.22
CAPN1-219ENST00000530495 GDAQ9Y2T3 454 aa16.45■□□□□ 0.22
CAPN1-219ENST00000530495 ARHGEF35A5YM69 484 aa16.44■□□□□ 0.22
CAPN1-219ENST00000530495 LRRN2O75325 713 aa16.44■□□□□ 0.22
CAPN1-219ENST00000530495 B3GAT3O94766 335 aa16.44■□□□□ 0.22
CAPN1-219ENST00000530495 MUTP22033 750 aa16.44■□□□□ 0.22
CAPN1-219ENST00000530495 FOSBP53539 338 aa16.44■□□□□ 0.22
CAPN1-219ENST00000530495 MLF2Q15773 248 aaPredicted RBP16.44■□□□□ 0.22
CAPN1-219ENST00000530495 UPP1Q16831 310 aa16.44■□□□□ 0.22
CAPN1-219ENST00000530495 DCAF4L1Q3SXM0 396 aa16.44■□□□□ 0.22
CAPN1-219ENST00000530495 NT5DC1Q5TFE4 455 aa16.44■□□□□ 0.22
CAPN1-219ENST00000530495 RSPO2Q6UXX9 243 aaPredicted RBP16.44■□□□□ 0.22
CAPN1-219ENST00000530495 UROC1Q96N76 676 aa16.44■□□□□ 0.22
CAPN1-219ENST00000530495 PPP1R10Q96QC0 940 aaKnown RBP16.44■□□□□ 0.22
CAPN1-219ENST00000530495 HCFC1R1Q9NWW0 138 aa16.44■□□□□ 0.22
CAPN1-219ENST00000530495 BACE2Q9Y5Z0 518 aa16.44■□□□□ 0.22
CAPN1-219ENST00000530495 TRAPPC3O43617 180 aa16.43■□□□□ 0.22
CAPN1-219ENST00000530495 LIG1P18858 919 aa16.43■□□□□ 0.22
CAPN1-219ENST00000530495 CLCNKBP51801 687 aa16.43■□□□□ 0.22
CAPN1-219ENST00000530495 PFKPQ01813 784 aa16.43■□□□□ 0.22
CAPN1-219ENST00000530495 ORC2Q13416 577 aaPredicted RBP16.43■□□□□ 0.22
CAPN1-219ENST00000530495 ZNF528Q3MIS6 628 aa16.43■□□□□ 0.22
CAPN1-219ENST00000530495 PABPC1LQ4VXU2 614 aaKnown RBP16.43■□□□□ 0.22
CAPN1-219ENST00000530495 ANKS3Q6ZW76 656 aa16.43■□□□□ 0.22
CAPN1-219ENST00000530495 NPAS3Q8IXF0 933 aa16.43■□□□□ 0.22
CAPN1-219ENST00000530495 KIAA2013Q8IYS2 634 aa16.43■□□□□ 0.22
CAPN1-219ENST00000530495 RUBCNQ92622 972 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms