RNA–Protein interactions for RNA: ENST00000530426.1

LTBP3-216, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 431 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-216ENST00000530426 LACTBL1A8MY62 500 aa16.66■□□□□ 0.26
LTBP3-216ENST00000530426 EFCAB14O75071 495 aa16.66■□□□□ 0.26
LTBP3-216ENST00000530426 UPP2O95045 317 aa16.66■□□□□ 0.26
LTBP3-216ENST00000530426 EOMESO95936 686 aa16.66■□□□□ 0.26
LTBP3-216ENST00000530426 AMHP03971 560 aa16.66■□□□□ 0.26
LTBP3-216ENST00000530426 TRIM49P0CI25 452 aa16.66■□□□□ 0.26
LTBP3-216ENST00000530426 TRIM49CP0CI26 452 aa16.66■□□□□ 0.26
LTBP3-216ENST00000530426 TNNI1P19237 187 aa16.66■□□□□ 0.26
LTBP3-216ENST00000530426 KCNJ6P48051 423 aa16.66■□□□□ 0.26
LTBP3-216ENST00000530426 FAM189BP81408 668 aa16.66■□□□□ 0.26
LTBP3-216ENST00000530426 KRT31Q15323 416 aa16.66■□□□□ 0.26
LTBP3-216ENST00000530426 SLC10A6Q3KNW5 377 aa16.66■□□□□ 0.26
LTBP3-216ENST00000530426 PSRC1Q6PGN9 363 aaPredicted RBP16.66■□□□□ 0.26
LTBP3-216ENST00000530426 CD302Q8IX05 232 aa16.66■□□□□ 0.26
LTBP3-216ENST00000530426 TMC2Q8TDI7 906 aa16.66■□□□□ 0.26
LTBP3-216ENST00000530426 VWCEQ96DN2 955 aa16.66■□□□□ 0.26
LTBP3-216ENST00000530426 RPS6KC1Q96S38 1066 aa16.66■□□□□ 0.26
LTBP3-216ENST00000530426 VPS16Q9H269 839 aa16.66■□□□□ 0.26
LTBP3-216ENST00000530426 RSAD1Q9HA92 442 aa16.66■□□□□ 0.26
LTBP3-216ENST00000530426 UBN1Q9NPG3 1134 aa16.66■□□□□ 0.26
LTBP3-216ENST00000530426 TMEM161AQ9NX61 479 aa16.66■□□□□ 0.26
LTBP3-216ENST00000530426 INPP5FQ9Y2H2 1132 aa16.66■□□□□ 0.26
LTBP3-216ENST00000530426 GIT1Q9Y2X7 761 aa16.66■□□□□ 0.26
LTBP3-216ENST00000530426 LTBP2Q14767 1821 aa16.66■□□□□ 0.26
LTBP3-216ENST00000530426 MEIS3P2A8K0S8 358 aa16.65■□□□□ 0.26
LTBP3-216ENST00000530426 BAIAP3O94812 1187 aa16.65■□□□□ 0.26
LTBP3-216ENST00000530426 MLH1P40692 756 aa16.65■□□□□ 0.26
LTBP3-216ENST00000530426 EPHB4P54760 987 aa16.65■□□□□ 0.26
LTBP3-216ENST00000530426 MARSP56192 900 aaKnown RBP16.65■□□□□ 0.26
LTBP3-216ENST00000530426 WNT7BP56706 349 aa16.65■□□□□ 0.26
LTBP3-216ENST00000530426 DLG4P78352 724 aa16.65■□□□□ 0.26
LTBP3-216ENST00000530426 FANCCQ00597 558 aa16.65■□□□□ 0.26
LTBP3-216ENST00000530426 POU5F1Q01860 360 aaKnown RBP16.65■□□□□ 0.26
LTBP3-216ENST00000530426 GSE1Q14687 1217 aa16.65■□□□□ 0.26
LTBP3-216ENST00000530426 MAN2A1Q16706 1144 aa16.65■□□□□ 0.26
LTBP3-216ENST00000530426 UVSSAQ2YD98 709 aa16.65■□□□□ 0.26
LTBP3-216ENST00000530426 FILIP1LQ4L180 1135 aa16.65■□□□□ 0.26
LTBP3-216ENST00000530426 AGMOQ6ZNB7 445 aa16.65■□□□□ 0.26
LTBP3-216ENST00000530426 TRIM59Q8IWR1 403 aa16.65■□□□□ 0.26
LTBP3-216ENST00000530426 ABI1Q8IZP0 508 aa16.65■□□□□ 0.26
LTBP3-216ENST00000530426 PLEKHO2Q8TD55 490 aa16.65■□□□□ 0.26
LTBP3-216ENST00000530426 PARD3BQ8TEW8 1205 aa16.65■□□□□ 0.26
LTBP3-216ENST00000530426 KIF12Q96FN5 646 aa16.65■□□□□ 0.26
LTBP3-216ENST00000530426 BORCS6Q96GS4 357 aa16.65■□□□□ 0.26
LTBP3-216ENST00000530426 SNX27Q96L92 541 aa16.65■□□□□ 0.26
LTBP3-216ENST00000530426 GAD1Q99259 594 aa16.65■□□□□ 0.26
LTBP3-216ENST00000530426 POP1Q99575 1024 aaKnown RBP16.65■□□□□ 0.26
LTBP3-216ENST00000530426 ELAC1Q9H777 363 aaKnown RBP16.65■□□□□ 0.26
LTBP3-216ENST00000530426 PLEKHA5Q9HAU0 1116 aa16.65■□□□□ 0.26
LTBP3-216ENST00000530426 RNF19AQ9NV58 838 aa16.65■□□□□ 0.26
LTBP3-216ENST00000530426 LIMA1Q9UHB6 759 aaKnown RBP16.65■□□□□ 0.26
LTBP3-216ENST00000530426 TTC26A0AVF1 554 aa16.64■□□□□ 0.25
LTBP3-216ENST00000530426 LRRIQ3A6PVS8 624 aaPredicted RBP16.64■□□□□ 0.25
LTBP3-216ENST00000530426 STX10O60499 249 aa16.64■□□□□ 0.25
LTBP3-216ENST00000530426 FGFR1P11362 822 aa16.64■□□□□ 0.25
LTBP3-216ENST00000530426 ATF7P17544 494 aaPredicted RBP16.64■□□□□ 0.25
LTBP3-216ENST00000530426 COPB1P53618 953 aaKnown RBP16.64■□□□□ 0.25
LTBP3-216ENST00000530426 TFAMQ00059 246 aaKnown RBP16.64■□□□□ 0.25
LTBP3-216ENST00000530426 VWA3BQ502W6 1294 aa16.64■□□□□ 0.25
LTBP3-216ENST00000530426 GLRA4Q5JXX5 417 aa16.64■□□□□ 0.25
LTBP3-216ENST00000530426 LMBRD2Q68DH5 695 aaPredicted RBP16.64■□□□□ 0.25
LTBP3-216ENST00000530426 JADE1Q6IE81 842 aa16.64■□□□□ 0.25
LTBP3-216ENST00000530426 GLB1LQ6UWU2 654 aa16.64■□□□□ 0.25
LTBP3-216ENST00000530426 C16orf59Q7L2K0 433 aa16.64■□□□□ 0.25
LTBP3-216ENST00000530426 ZNF598Q86UK7 904 aaKnown RBP16.64■□□□□ 0.25
LTBP3-216ENST00000530426 NPAS4Q8IUM7 802 aa16.64■□□□□ 0.25
LTBP3-216ENST00000530426 HELQQ8TDG4 1101 aa16.64■□□□□ 0.25
LTBP3-216ENST00000530426 CGRRF1Q99675 332 aa16.64■□□□□ 0.25
LTBP3-216ENST00000530426 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.64■□□□□ 0.252e-6■□□□□ 9.5
LTBP3-216ENST00000530426 ASB7Q9H672 318 aa16.64■□□□□ 0.25
LTBP3-216ENST00000530426 PHACTR2O75167 634 aa16.63■□□□□ 0.25
LTBP3-216ENST00000530426 TNNC2P02585 160 aa16.63■□□□□ 0.25
LTBP3-216ENST00000530426 AFPP02771 609 aaKnown RBP16.63■□□□□ 0.25
LTBP3-216ENST00000530426 NFICP08651 508 aa16.63■□□□□ 0.25
LTBP3-216ENST00000530426 TMEM191BP0C7N4 346 aa16.63■□□□□ 0.25
LTBP3-216ENST00000530426 GCLMP48507 274 aa16.63■□□□□ 0.25
LTBP3-216ENST00000530426 UBASH3AP57075 661 aa16.63■□□□□ 0.25
LTBP3-216ENST00000530426 WDR5P61964 334 aaKnown RBP16.63■□□□□ 0.25
LTBP3-216ENST00000530426 KCNH2Q12809 1159 aa16.63■□□□□ 0.25
LTBP3-216ENST00000530426 TMEM132DQ14C87 1099 aa16.63■□□□□ 0.25
LTBP3-216ENST00000530426 TMEM240Q5SV17 173 aa16.63■□□□□ 0.25
LTBP3-216ENST00000530426 FAM117BQ6P1L5 589 aa16.63■□□□□ 0.25
LTBP3-216ENST00000530426 WDR49Q8IV35 697 aa16.63■□□□□ 0.25
LTBP3-216ENST00000530426 URGCPQ8TCY9 931 aa16.63■□□□□ 0.25
LTBP3-216ENST00000530426 CACTINQ8WUQ7 758 aaKnown RBP16.63■□□□□ 0.25
LTBP3-216ENST00000530426 SLC35C1Q96A29 364 aa16.63■□□□□ 0.25
LTBP3-216ENST00000530426 ANKRD36BP1Q96IX9 119 aa16.63■□□□□ 0.25
LTBP3-216ENST00000530426 ZFP42Q96MM3 310 aa16.63■□□□□ 0.25
LTBP3-216ENST00000530426 CXCL16Q9H2A7 254 aa16.63■□□□□ 0.25
LTBP3-216ENST00000530426 MTIF3Q9H2K0 278 aaKnown RBP16.63■□□□□ 0.25
LTBP3-216ENST00000530426 GRPEL1Q9HAV7 217 aa16.63■□□□□ 0.25
LTBP3-216ENST00000530426 ARL5CA6NH57 179 aa16.62■□□□□ 0.25
LTBP3-216ENST00000530426 MEFVO15553 781 aaPredicted RBP16.62■□□□□ 0.25
LTBP3-216ENST00000530426 HOXA2O43364 376 aa16.62■□□□□ 0.25
LTBP3-216ENST00000530426 XPOTO43592 962 aaKnown RBP16.62■□□□□ 0.25
LTBP3-216ENST00000530426 OFD1O75665 1012 aa16.62■□□□□ 0.25
LTBP3-216ENST00000530426 CLSTN1O94985 981 aa16.62■□□□□ 0.25
LTBP3-216ENST00000530426 POMCP01189 267 aa16.62■□□□□ 0.25
LTBP3-216ENST00000530426 MAGEA10P43363 369 aaPredicted RBP16.62■□□□□ 0.25
LTBP3-216ENST00000530426 SCNN1GP51170 649 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms