RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, human

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLNS1A-209	ENST00000527299	GPR87	Q9BY21	358 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	NACA2	Q9H009	215 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	TSPY26P	Q9H489	355 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	LMBRD1	Q9NUN5	540 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	RGL1	Q9NZL6	768 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	PNMA2	Q9UL42	364 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	MYO6	Q9UM54	1294 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	FZD1	Q9UP38	647 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	WDR37	Q9Y2I8	494 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	KIF27	Q86VH2	1401 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	SYNJ1	O43426	1573 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ELP1	O95163	1332 aa		4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ATXN2	Q99700	1313 aa	Known RBP	4.17	□□□□□ -1.74
CLNS1A-209	ENST00000527299	KIF21A	Q7Z4S6	1674 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ABCC8	Q09428	1581 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299		A0A0A6YYK5	440 aa	Predicted RBP	4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	KRT38	O76015	456 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ERLIN2	O94905	339 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	FES	P07332	822 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	KCNA2	P16389	499 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ZNF37A	P17032	561 aa	Predicted RBP	4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	XBP1	P17861	261 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	RABGGTB	P53611	331 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ADAM8	P78325	824 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ZBED6	P86452	979 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ATP2C1	P98194	919 aa	Predicted RBP	4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	LAMB3	Q13751	1172 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	KRT72	Q14CN4	511 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ELAVL1	Q15717	326 aa	Known RBP	4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	RRP12	Q5JTH9	1297 aa	Known RBP	4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	SYNE3	Q6ZMZ3	975 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	MICALCL	Q6ZW33	695 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	GAREM2	Q75VX8	874 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	C16orf59	Q7L2K0	433 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	BRAP	Q7Z569	592 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ADGRG3	Q86Y34	549 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	OR8K1	Q8NGG5	319 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	B4GALNT2	Q8NHY0	566 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	MAGEC3	Q8TD91	643 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	GTF3C6	Q969F1	213 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	FBXW5	Q969U6	566 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	JAKMIP2	Q96AA8	810 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	CABS1	Q96KC9	395 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	FAM81B	Q96LP2	452 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	OSBPL9	Q96SU4	736 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	GPHA2	Q96T91	129 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	SLC6A15	Q9H2J7	730 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	MMADHC	Q9H3L0	296 aa	Predicted RBP	4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	TTC12	Q9H892	705 aa	Predicted RBP	4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	SYNPO2L	Q9H987	977 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ARGLU1	Q9NWB6	273 aa	Predicted RBP	4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	QPCTL	Q9NXS2	382 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ODF2L	Q9ULJ1	636 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	COL4A3	Q01955	1670 aa		4.16	□□□□□ -1.74
CLNS1A-209	ENST00000527299	THOC2	Q8NI27	1593 aa	Known RBP	4.15	□□□□□ -1.74
CLNS1A-209	ENST00000527299	BICDL2	A1A5D9	508 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	IQCA1L	A6NCM1	817 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	GOLGA6L10	A6NI86	522 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	GRXCR1	A8MXD5	290 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	GOLGA6L19	H0YKK7	550 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ZNF561-AS1	K7EIQ3	104 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ERC2	O15083	957 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	SH3BP5	O60239	455 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	SLU7	O95391	586 aa	Known RBP	4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	IGHD	P01880	384 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ITGB1	P05556	798 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	U2AF1L5	P0DN76	240 aa	Predicted RBP	4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	PYGM	P11217	842 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CYP11B2	P19099	503 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	NR4A1	P22736	598 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CD38	P28907	300 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	OAS2	P29728	719 aa	Known RBP	4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	GCLC	P48506	637 aa	Predicted RBP	4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	JAM2	P57087	298 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	SMAD3	P84022	425 aa	Known RBP	4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	U2AF1	Q01081	240 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	IFRD2	Q12894	506 aa	Predicted RBP	4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ACAP1	Q15027	740 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	PTPA	Q15257	358 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	E2F5	Q15329	346 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	SEC23A	Q15436	765 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CLPP	Q16740	277 aa	Predicted RBP	4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	KIAA0753	Q2KHM9	967 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	SLC4A8	Q2Y0W8	1093 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	LY6G5C	Q5SRR4	150 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	FAM111B	Q6SJ93	734 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	TMCO3	Q6UWJ1	677 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ARHGAP22	Q7Z5H3	698 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	IQCA1	Q86XH1	822 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	SYNE4	Q8N205	404 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	MIGA1	Q8NAN2	632 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	PCDH19	Q8TAB3	1148 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ERMN	Q8TAM6	284 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	FAM76A	Q8TAV0	307 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	PROKR1	Q8TCW9	393 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	NEK9	Q8TD19	979 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	THAP3	Q8WTV1	239 aa	Predicted RBP	4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ZFAND2B	Q8WV99	257 aa		4.15	□□□□□ -1.75
CLNS1A-209	ENST00000527299	KAT2B	Q92831	832 aa		4.15	□□□□□ -1.75

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