RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 KCNE1P15382 129 aa18.13■□□□□ 0.49
SMCO4-204ENST00000527149 GRIK3Q13003 919 aa18.13■□□□□ 0.49
SMCO4-204ENST00000527149 NFIL3Q16649 462 aa18.13■□□□□ 0.49
SMCO4-204ENST00000527149 GLRA4Q5JXX5 417 aa18.13■□□□□ 0.49
SMCO4-204ENST00000527149 CENPPQ6IPU0 288 aa18.13■□□□□ 0.49
SMCO4-204ENST00000527149 GPR153Q6NV75 609 aa18.13■□□□□ 0.49
SMCO4-204ENST00000527149 ZNF280BQ86YH2 543 aa18.13■□□□□ 0.49
SMCO4-204ENST00000527149 SLC9A9Q8IVB4 645 aa18.13■□□□□ 0.49
SMCO4-204ENST00000527149 GOLGA5Q8TBA6 731 aa18.13■□□□□ 0.49
SMCO4-204ENST00000527149 URGCPQ8TCY9 931 aa18.13■□□□□ 0.49
SMCO4-204ENST00000527149 PPP1R10Q96QC0 940 aaKnown RBP18.13■□□□□ 0.49
SMCO4-204ENST00000527149 PCIF1Q9H4Z3 704 aa18.13■□□□□ 0.49
SMCO4-204ENST00000527149 NRDE2Q9H7Z3 1164 aa18.13■□□□□ 0.49
SMCO4-204ENST00000527149 SLC28A3Q9HAS3 691 aa18.13■□□□□ 0.49
SMCO4-204ENST00000527149 TOPORSQ9NS56 1045 aaPredicted RBP18.13■□□□□ 0.49
SMCO4-204ENST00000527149 REV3LO60673 3130 aa18.13■□□□□ 0.49
SMCO4-204ENST00000527149 ATG2AQ2TAZ0 1938 aa18.12■□□□□ 0.49
SMCO4-204ENST00000527149 EPOPA6NHQ4 379 aa18.12■□□□□ 0.49
SMCO4-204ENST00000527149 DDHD2O94830 711 aa18.12■□□□□ 0.49
SMCO4-204ENST00000527149 KIF20AO95235 890 aa18.12■□□□□ 0.49
SMCO4-204ENST00000527149 PMS1P54277 932 aaKnown RBP18.12■□□□□ 0.49
SMCO4-204ENST00000527149 POU5F1Q01860 360 aaKnown RBP18.12■□□□□ 0.49
SMCO4-204ENST00000527149 KLHL40Q2TBA0 621 aa18.12■□□□□ 0.49
SMCO4-204ENST00000527149 CCDC183Q5T5S1 534 aa18.12■□□□□ 0.49
SMCO4-204ENST00000527149 CBWD2Q8IUF1 395 aa18.12■□□□□ 0.49
SMCO4-204ENST00000527149 BRSK2Q8IWQ3 736 aa18.12■□□□□ 0.49
SMCO4-204ENST00000527149 GPD1LQ8N335 351 aa18.12■□□□□ 0.49
SMCO4-204ENST00000527149 TGS1Q96RS0 853 aaKnown RBP18.12■□□□□ 0.49
SMCO4-204ENST00000527149 FAM213AQ9BRX8 229 aa18.12■□□□□ 0.49
SMCO4-204ENST00000527149 PLEKHA5Q9HAU0 1116 aa18.12■□□□□ 0.49
SMCO4-204ENST00000527149 KANSL3Q9P2N6 904 aa18.12■□□□□ 0.49
SMCO4-204ENST00000527149 DNAJB4Q9UDY4 337 aa18.12■□□□□ 0.49
SMCO4-204ENST00000527149 PLXNA4Q9HCM2 1894 aa18.12■□□□□ 0.49
SMCO4-204ENST00000527149 EYSQ5T1H1 3165 aa18.12■□□□□ 0.49
SMCO4-204ENST00000527149 SMIM28A0A1B0GU29 152 aa18.11■□□□□ 0.49
SMCO4-204ENST00000527149 GOLGA8IPA6NC78 632 aa18.11■□□□□ 0.49
SMCO4-204ENST00000527149 GOLGA8JA6NMD2 632 aa18.11■□□□□ 0.49
SMCO4-204ENST00000527149 C5orf67F2Z3F1 127 aa18.11■□□□□ 0.49
SMCO4-204ENST00000527149 NR3C1P04150 777 aa18.11■□□□□ 0.49
SMCO4-204ENST00000527149 PBX3P40426 434 aa18.11■□□□□ 0.49
SMCO4-204ENST00000527149 CYP2J2P51589 502 aa18.11■□□□□ 0.49
SMCO4-204ENST00000527149 YARSP54577 528 aaKnown RBP18.11■□□□□ 0.49
SMCO4-204ENST00000527149 ZC3H3Q8IXZ2 948 aaKnown RBP18.11■□□□□ 0.49
SMCO4-204ENST00000527149 COLGALT2Q8IYK4 626 aa18.11■□□□□ 0.49
SMCO4-204ENST00000527149 COLGALT1Q8NBJ5 622 aa18.11■□□□□ 0.49
SMCO4-204ENST00000527149 RPS6KC1Q96S38 1066 aa18.11■□□□□ 0.49
SMCO4-204ENST00000527149 GZF1Q9H116 711 aaPredicted RBP18.11■□□□□ 0.49
SMCO4-204ENST00000527149 ZNF576Q9H609 170 aa18.11■□□□□ 0.49
SMCO4-204ENST00000527149 LACTBL1A8MY62 500 aa18.1■□□□□ 0.49
SMCO4-204ENST00000527149 LDHAP00338 332 aaKnown RBP18.1■□□□□ 0.49
SMCO4-204ENST00000527149 LAG3P18627 525 aa18.1■□□□□ 0.49
SMCO4-204ENST00000527149 SOX4Q06945 474 aaPredicted RBP18.1■□□□□ 0.49
SMCO4-204ENST00000527149 MYBPC2Q14324 1141 aa18.1■□□□□ 0.49
SMCO4-204ENST00000527149 ZBTB6Q15916 424 aa18.1■□□□□ 0.49
SMCO4-204ENST00000527149 EPC2Q52LR7 807 aa18.1■□□□□ 0.49
SMCO4-204ENST00000527149 TMEM173Q86WV6 379 aaPredicted RBP18.1■□□□□ 0.49
SMCO4-204ENST00000527149 XXYLT1Q8NBI6 393 aa18.1■□□□□ 0.49
SMCO4-204ENST00000527149 SAMD11Q96NU1 681 aa18.1■□□□□ 0.49
SMCO4-204ENST00000527149 RPF1Q9H9Y2 349 aaKnown RBP18.1■□□□□ 0.49
SMCO4-204ENST00000527149 CACNG4Q9UBN1 327 aa18.1■□□□□ 0.49
SMCO4-204ENST00000527149 MTUS1Q9ULD2 1270 aa18.1■□□□□ 0.49
SMCO4-204ENST00000527149 TRIM49BA6NDI0 452 aa18.09■□□□□ 0.49
SMCO4-204ENST00000527149 ZC3H11AO75152 810 aaKnown RBP eCLIP18.09■□□□□ 0.49
SMCO4-204ENST00000527149 THP07101 528 aa18.09■□□□□ 0.49
SMCO4-204ENST00000527149 GALTP07902 379 aa18.09■□□□□ 0.49
SMCO4-204ENST00000527149 PTMSP20962 102 aa18.09■□□□□ 0.49
SMCO4-204ENST00000527149 CCNE1P24864 410 aa18.09■□□□□ 0.49
SMCO4-204ENST00000527149 CTNNB1P35222 781 aa18.09■□□□□ 0.49
SMCO4-204ENST00000527149 BMPR1AP36894 532 aa18.09■□□□□ 0.49
SMCO4-204ENST00000527149 PPP1R2P41236 205 aa18.09■□□□□ 0.49
SMCO4-204ENST00000527149 SLC11A1P49279 550 aa18.09■□□□□ 0.49
SMCO4-204ENST00000527149 CASP4P49662 377 aa18.09■□□□□ 0.49
SMCO4-204ENST00000527149 BCAR1P56945 870 aa18.09■□□□□ 0.49
SMCO4-204ENST00000527149 RNASELQ05823 741 aaKnown RBP18.09■□□□□ 0.49
SMCO4-204ENST00000527149 PPP2R3AQ06190 1150 aa18.09■□□□□ 0.49
SMCO4-204ENST00000527149 TUSC3Q13454 348 aa18.09■□□□□ 0.49
SMCO4-204ENST00000527149 SNRNP35Q16560 246 aaKnown RBP18.09■□□□□ 0.49
SMCO4-204ENST00000527149 EDRF1Q3B7T1 1238 aa18.09■□□□□ 0.49
SMCO4-204ENST00000527149 DPCR1Q3MIW9 517 aa18.09■□□□□ 0.49
SMCO4-204ENST00000527149 TTI2Q6NXR4 508 aa18.09■□□□□ 0.49
SMCO4-204ENST00000527149 FOXR2Q6PJQ5 311 aa18.09■□□□□ 0.49
SMCO4-204ENST00000527149 KCNT2Q6UVM3 1135 aa18.09■□□□□ 0.49
SMCO4-204ENST00000527149 EFCAB13Q8IY85 973 aa18.09■□□□□ 0.49
SMCO4-204ENST00000527149 TMEM130Q8N3G9 435 aa18.09■□□□□ 0.49
SMCO4-204ENST00000527149 BCL7CQ8WUZ0 217 aaPredicted RBP18.09■□□□□ 0.49
SMCO4-204ENST00000527149 P2RX5Q93086 422 aa18.09■□□□□ 0.49
SMCO4-204ENST00000527149 C18orf25Q96B23 403 aaPredicted RBP18.09■□□□□ 0.49
SMCO4-204ENST00000527149 DHTKD1Q96HY7 919 aaPredicted RBP18.09■□□□□ 0.49
SMCO4-204ENST00000527149 MED15Q96RN5 788 aa18.09■□□□□ 0.49
SMCO4-204ENST00000527149 PAAF1Q9BRP4 392 aa18.09■□□□□ 0.49
SMCO4-204ENST00000527149 TMEM175Q9BSA9 504 aa18.09■□□□□ 0.49
SMCO4-204ENST00000527149 PLVAPQ9BX97 442 aa18.09■□□□□ 0.49
SMCO4-204ENST00000527149 CERS4Q9HA82 394 aa18.09■□□□□ 0.49
SMCO4-204ENST00000527149 MARCH5Q9NX47 278 aa18.09■□□□□ 0.49
SMCO4-204ENST00000527149 RBAKQ9NYW8 714 aaPredicted RBP18.09■□□□□ 0.49
SMCO4-204ENST00000527149 RWDD3Q9Y3V2 267 aa18.09■□□□□ 0.49
SMCO4-204ENST00000527149 PRRC2BQ5JSZ5 2229 aaKnown RBP18.08■□□□□ 0.49
SMCO4-204ENST00000527149 PTPRJQ12913 1337 aa18.08■□□□□ 0.49
SMCO4-204ENST00000527149 F8W810 466 aa18.08■□□□□ 0.48
SMCO4-204ENST00000527149 PSMA7O14818 248 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms