RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 MTERF2Q49AM1 385 aa18.86■□□□□ 0.61
USH1C-205ENST00000527020 KLRG1Q96E93 195 aa18.86■□□□□ 0.61
USH1C-205ENST00000527020 BICD1Q96G01 975 aa18.86■□□□□ 0.61
USH1C-205ENST00000527020 EPB41L4BQ9H329 900 aa18.86■□□□□ 0.61
USH1C-205ENST00000527020 GRHL1Q9NZI5 618 aa18.86■□□□□ 0.61
USH1C-205ENST00000527020 UVRAGQ9P2Y5 699 aa18.86■□□□□ 0.61
USH1C-205ENST00000527020 PCDHA3Q9Y5H8 950 aa18.86■□□□□ 0.61
USH1C-205ENST00000527020 ZNF541Q9H0D2 1346 aa18.86■□□□□ 0.61
USH1C-205ENST00000527020 STAM2O75886 525 aa18.86■□□□□ 0.61
USH1C-205ENST00000527020 CHRNA3P32297 505 aa18.86■□□□□ 0.61
USH1C-205ENST00000527020 LSP1P33241 339 aa18.86■□□□□ 0.61
USH1C-205ENST00000527020 EMC2Q15006 297 aa18.86■□□□□ 0.61
USH1C-205ENST00000527020 XKR3Q5GH77 459 aa18.86■□□□□ 0.61
USH1C-205ENST00000527020 USP37Q86T82 979 aa18.86■□□□□ 0.61
USH1C-205ENST00000527020 IFT74Q96LB3 600 aa18.86■□□□□ 0.61
USH1C-205ENST00000527020 HAPLN2Q9GZV7 340 aa18.86■□□□□ 0.61
USH1C-205ENST00000527020 PTPRFP10586 1907 aa18.86■□□□□ 0.61
USH1C-205ENST00000527020 LTBP3Q9NS15 1303 aa18.86■□□□□ 0.61
USH1C-205ENST00000527020 GOLGA6L10A6NI86 522 aa18.85■□□□□ 0.61
USH1C-205ENST00000527020 ZC3H11AO75152 810 aaKnown RBP eCLIP18.85■□□□□ 0.61
USH1C-205ENST00000527020 GGPS1O95749 300 aa18.85■□□□□ 0.61
USH1C-205ENST00000527020 UNGP13051 313 aaPredicted RBP18.85■□□□□ 0.61
USH1C-205ENST00000527020 CYP1B1Q16678 543 aa18.85■□□□□ 0.61
USH1C-205ENST00000527020 SEL1L2Q5TEA6 688 aa18.85■□□□□ 0.61
USH1C-205ENST00000527020 LMBRD2Q68DH5 695 aaPredicted RBP18.85■□□□□ 0.61
USH1C-205ENST00000527020 CYFIP1Q7L576 1253 aa18.85■□□□□ 0.61
USH1C-205ENST00000527020 PSPC1Q8WXF1 523 aaKnown RBP18.85■□□□□ 0.61
USH1C-205ENST00000527020 MAGOHBQ96A72 148 aaKnown RBP18.85■□□□□ 0.61
USH1C-205ENST00000527020 CENPHQ9H3R5 247 aa18.85■□□□□ 0.61
USH1C-205ENST00000527020 SNX24Q9Y343 169 aa18.85■□□□□ 0.61
USH1C-205ENST00000527020 STYXL1Q9Y6J8 313 aa18.85■□□□□ 0.61
USH1C-205ENST00000527020 ANKRD65E5RJM6 399 aa18.85■□□□□ 0.61
USH1C-205ENST00000527020 SPOPO43791 374 aa18.85■□□□□ 0.61
USH1C-205ENST00000527020 EXTL3O43909 919 aa18.85■□□□□ 0.61
USH1C-205ENST00000527020 KRT5P13647 590 aa18.85■□□□□ 0.61
USH1C-205ENST00000527020 MDH1P40925 334 aaKnown RBP18.85■□□□□ 0.61
USH1C-205ENST00000527020 NLRP11P59045 1033 aaKnown RBP18.85■□□□□ 0.61
USH1C-205ENST00000527020 PSMD6Q15008 389 aa18.85■□□□□ 0.61
USH1C-205ENST00000527020 GNPTABQ3T906 1256 aa18.85■□□□□ 0.61
USH1C-205ENST00000527020 MIS18BP1Q6P0N0 1132 aa18.85■□□□□ 0.61
USH1C-205ENST00000527020 ENOSF1Q7L5Y1 443 aa18.85■□□□□ 0.61
USH1C-205ENST00000527020 SLC13A5Q86YT5 568 aaPredicted RBP18.85■□□□□ 0.61
USH1C-205ENST00000527020 TRPM4Q8TD43 1214 aa18.85■□□□□ 0.61
USH1C-205ENST00000527020 CNOT8Q9UFF9 292 aaKnown RBP18.85■□□□□ 0.61
USH1C-205ENST00000527020 ATP8A1Q9Y2Q0 1164 aa18.85■□□□□ 0.61
USH1C-205ENST00000527020 PTPRJQ12913 1337 aa18.85■□□□□ 0.61
USH1C-205ENST00000527020 ZEB2O60315 1214 aa18.84■□□□□ 0.61
USH1C-205ENST00000527020 ATG7O95352 703 aa18.84■□□□□ 0.61
USH1C-205ENST00000527020 CORO7P57737 925 aa18.84■□□□□ 0.61
USH1C-205ENST00000527020 BIRC3Q13489 604 aa18.84■□□□□ 0.61
USH1C-205ENST00000527020 ZACNQ401N2 412 aa18.84■□□□□ 0.61
USH1C-205ENST00000527020 SPDYCQ5MJ68 293 aa18.84■□□□□ 0.61
USH1C-205ENST00000527020 CRELD2Q6UXH1 353 aaPredicted RBP18.84■□□□□ 0.61
USH1C-205ENST00000527020 APOBEC3FQ8IUX4 373 aaKnown RBP18.84■□□□□ 0.61
USH1C-205ENST00000527020 EFCAB13Q8IY85 973 aa18.84■□□□□ 0.61
USH1C-205ENST00000527020 C10orf67Q8IYJ2 551 aa18.84■□□□□ 0.61
USH1C-205ENST00000527020 FBXO25Q8TCJ0 367 aa18.84■□□□□ 0.61
USH1C-205ENST00000527020 ASAP3Q8TDY4 903 aa18.84■□□□□ 0.61
USH1C-205ENST00000527020 TMEM143Q96AN5 459 aa18.84■□□□□ 0.61
USH1C-205ENST00000527020 CEP89Q96ST8 783 aa18.84■□□□□ 0.61
USH1C-205ENST00000527020 AFG3L2Q9Y4W6 797 aa18.84■□□□□ 0.61
USH1C-205ENST00000527020 MAFBQ9Y5Q3 323 aaPredicted RBP18.84■□□□□ 0.61
USH1C-205ENST00000527020 C4BPAP04003 597 aaKnown RBP18.83■□□□□ 0.61
USH1C-205ENST00000527020 RARAP10276 462 aa18.83■□□□□ 0.61
USH1C-205ENST00000527020 HPDP32754 393 aaPredicted RBP18.83■□□□□ 0.61
USH1C-205ENST00000527020 RPL21P46778 160 aaKnown RBP18.83■□□□□ 0.61
USH1C-205ENST00000527020 LIG4P49917 911 aa18.83■□□□□ 0.61
USH1C-205ENST00000527020 AGBL2Q5U5Z8 902 aa18.83■□□□□ 0.61
USH1C-205ENST00000527020 TDRD10Q5VZ19 366 aaKnown RBP18.83■□□□□ 0.61
USH1C-205ENST00000527020 CCDC137Q6PK04 289 aaKnown RBP18.83■□□□□ 0.61
USH1C-205ENST00000527020 RUFY4Q6ZNE9 571 aa18.83■□□□□ 0.61
USH1C-205ENST00000527020 MYPNQ86TC9 1320 aa18.83■□□□□ 0.61
USH1C-205ENST00000527020 KCNN1Q92952 543 aa18.83■□□□□ 0.61
USH1C-205ENST00000527020 C1orf112Q9NSG2 853 aa18.83■□□□□ 0.61
USH1C-205ENST00000527020 SLC12A6Q9UHW9 1150 aa18.83■□□□□ 0.61
USH1C-205ENST00000527020 H0YCG3 227 aa18.83■□□□□ 0.6
USH1C-205ENST00000527020 POLGP54098 1239 aaPredicted RBP18.83■□□□□ 0.6
USH1C-205ENST00000527020 PLTPP55058 493 aa18.83■□□□□ 0.6
USH1C-205ENST00000527020 CNTN2Q02246 1040 aa18.83■□□□□ 0.6
USH1C-205ENST00000527020 PTGISQ16647 500 aa18.83■□□□□ 0.6
USH1C-205ENST00000527020 TRIM7Q9C029 511 aa18.83■□□□□ 0.6
USH1C-205ENST00000527020 EPN3Q9H201 632 aa18.83■□□□□ 0.6
USH1C-205ENST00000527020 DHX33Q9H6R0 707 aaKnown RBP18.83■□□□□ 0.6
USH1C-205ENST00000527020 PPP1R1BQ9UD71 204 aaPredicted RBP18.83■□□□□ 0.6
USH1C-205ENST00000527020 RASAL2Q9UJF2 1139 aa18.83■□□□□ 0.6
USH1C-205ENST00000527020 DCDC2CA8MYV0 355 aa18.82■□□□□ 0.6
USH1C-205ENST00000527020 PEX10O60683 326 aa18.82■□□□□ 0.6
USH1C-205ENST00000527020 VNN1O95497 513 aa18.82■□□□□ 0.6
USH1C-205ENST00000527020 HLA-DRAP01903 254 aa18.82■□□□□ 0.6
USH1C-205ENST00000527020 EDN1P05305 212 aa18.82■□□□□ 0.6
USH1C-205ENST00000527020 GLRA2P23416 452 aa18.82■□□□□ 0.6
USH1C-205ENST00000527020 ICAM3P32942 547 aa18.82■□□□□ 0.6
USH1C-205ENST00000527020 ACOT2P49753 483 aa18.82■□□□□ 0.6
USH1C-205ENST00000527020 ZBTB45Q96K62 511 aaPredicted RBP18.82■□□□□ 0.6
USH1C-205ENST00000527020 PORCNQ9H237 461 aa18.82■□□□□ 0.6
USH1C-205ENST00000527020 A0A0G2JMZ2 1700 aa18.82■□□□□ 0.6
USH1C-205ENST00000527020 PIGRP01833 764 aa18.82■□□□□ 0.6
USH1C-205ENST00000527020 OATP04181 439 aa18.82■□□□□ 0.6
USH1C-205ENST00000527020 ARL2P36404 184 aa18.82■□□□□ 0.6
USH1C-205ENST00000527020 COILP38432 576 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms